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Sgr026466 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr026466
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionLysM domain-containing protein
Genome locationtig00153031:5689736..5690065
RNA-Seq ExpressionSgr026466
SyntenySgr026466
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018392 - LysM domain
IPR036779 - LysM domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8376691.1 hypothetical protein BUALT_Bualt09G0090200 [Buddleja alternifolia]3.3e-2366.29Show/hide
Query:  ASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH
        A+ +  L+LVLSCC      E TA E    +R  +   CDEIYVVREGETL TISEKCGDPFI+EENPHI+DPDDVFPGLVIKITPF +
Subjt:  ASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH

XP_017976703.1 PREDICTED: uncharacterized protein LOC108662080 [Theobroma cacao]2.1e-2265.22Show/hide
Query:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLN-ACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH
        +CA  MAV+L++    CC  S+     E    Q+D M+N  CDEIYVVREGETLQTISEKCGDP+I+EENPHI+DPDDVFPGLVIKITPF++
Subjt:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLN-ACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH

XP_019186406.1 PREDICTED: uncharacterized protein LOC109181107 [Ipomoea nil]9.6e-2367.02Show/hide
Query:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRD---AMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH
        +CA  MA L+LVLS   CC+S E   A + M +R    A    CDEIYVVREGETL TIS+KCGDPFI+EENPHI+DPDDVFPGLVIKITPF H
Subjt:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRD---AMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH

XP_022744694.1 uncharacterized protein LOC111295462 [Durio zibethinus]1.6e-2264.84Show/hide
Query:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH
        HCA  MAV+L++   CCC +S       +E+         CDEIYVVREGETLQTISEKCGDPFI+EENPHI+DPDDVFPGLVIKITPF +
Subjt:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH

XP_039066142.1 uncharacterized protein LOC120211725 [Hibiscus syriacus]7.4e-2363.44Show/hide
Query:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAML----NACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPF
        HCA  MA +LL++SCC           E E ++R+A+L     ACDEIYVVREGETL TI EKCGDPFI+E+NPHI+DPDDVFPGLV+KITPF
Subjt:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAML----NACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPF

TrEMBL top hitse value%identityAlignment
A0A2J6M9W5 LysM domain-containing protein1.0e-2264.84Show/hide
Query:  STMAVLLLVLSCCCCCQSQELTAAEREMAQR----DAMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQ
        S +  L+LVLSCC     + L     +MA R    D+M   CDEIYVVREGETL TISEKCGDP+I+EENPHI+DPDDVFPGLVIKITPF+
Subjt:  STMAVLLLVLSCCCCCQSQELTAAEREMAQR----DAMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQ

A0A6A3BPY1 Transcription initiation factor TFIID subunit 12-like3.6e-2363.44Show/hide
Query:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAML----NACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPF
        HCA  MA +LL++SCC           E E ++R+A+L     ACDEIYVVREGETL TI EKCGDPFI+E+NPHI+DPDDVFPGLV+KITPF
Subjt:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAML----NACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPF

A0A6J1AQQ1 uncharacterized protein LOC1104203731.4e-2265.22Show/hide
Query:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLN-ACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH
        +CA  MAV+L++    CC  S+     E    Q+D M+N  CDEIYVVREGETLQTISEKCGDP+I+EENPHI+DPDDVFPGLVIKITPF++
Subjt:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLN-ACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH

A0A6P5YVX7 uncharacterized protein LOC1112954627.9e-2364.84Show/hide
Query:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH
        HCA  MAV+L++   CCC +S       +E+         CDEIYVVREGETLQTISEKCGDPFI+EENPHI+DPDDVFPGLVIKITPF +
Subjt:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQH

G7L607 Peptidoglycan-binding LysM domain protein2.3e-2270.33Show/hide
Query:  RHCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLN-ACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPF
        R+C    AV++L+L+CC   +S ELT    EM QR A  N ACDEIYVVREGETL TISEKCGDPFI+EENPHI+DPDDVFPGLVIKI PF
Subjt:  RHCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLN-ACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52790.1 peptidoglycan-binding LysM domain-containing protein1.3e-1752.63Show/hide
Query:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLN-------ACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITP
        +CA   A++LL+ S      +QE +    E  Q   M+        ACDEIY V+EGETLQTISEKCGDP+I+E NPHI+D DD+FPGL+I+ITP
Subjt:  HCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLN-------ACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITP

AT4G25433.1 peptidoglycan-binding LysM domain-containing protein4.9e-1767.92Show/hide
Query:  RDAMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKI
        +  M   C+E+YVV EG+TL +ISEKCGDPFI+E NPHI+DPDDVFPGL+IK+
Subjt:  RDAMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKI

AT5G62150.1 peptidoglycan-binding LysM domain-containing protein9.0e-1977.55Show/hide
Query:  CDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPF
        C+EIY+V EGETL TI +KCGDPFI+E NPHI+DPDDVFPGLV+KI PF
Subjt:  CDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGATATCAGTACTTCATAGCCAGCGCCACTGTGCTTCGACAATGGCGGTTCTGCTTCTGGTTTTGAGCTGCTGTTGCTGCTGCCAGAGCCAAGAGTTGACGGC
GGCCGAGAGGGAGATGGCTCAGAGAGATGCCATGTTGAACGCTTGTGATGAGATATATGTCGTTCGTGAAGGAGAAACTTTGCAGACGATCAGTGAAAAGTGTGGAGATC
CATTTATTCTTGAAGAGAATCCTCATATTAATGACCCAGATGATGTTTTTCCCGGTTTGGTCATCAAGATCACTCCTTTTCAACATATCATTCATGGCTTTCTCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGATATCAGTACTTCATAGCCAGCGCCACTGTGCTTCGACAATGGCGGTTCTGCTTCTGGTTTTGAGCTGCTGTTGCTGCTGCCAGAGCCAAGAGTTGACGGC
GGCCGAGAGGGAGATGGCTCAGAGAGATGCCATGTTGAACGCTTGTGATGAGATATATGTCGTTCGTGAAGGAGAAACTTTGCAGACGATCAGTGAAAAGTGTGGAGATC
CATTTATTCTTGAAGAGAATCCTCATATTAATGACCCAGATGATGTTTTTCCCGGTTTGGTCATCAAGATCACTCCTTTTCAACATATCATTCATGGCTTTCTCACCTGA
Protein sequenceShow/hide protein sequence
MAKISVLHSQRHCASTMAVLLLVLSCCCCCQSQELTAAEREMAQRDAMLNACDEIYVVREGETLQTISEKCGDPFILEENPHINDPDDVFPGLVIKITPFQHIIHGFLT