CuGenDBv2

Gene ID	Sgr026509
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	WD repeat-containing protein 3
Genome location	tig00153031:6169250..6177576
RNA-Seq Expression	Sgr026509
Synteny	Sgr026509
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR036322 - WD40-repeat-containing domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6595217.1 WD repeat-containing protein 3-like protein, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-21

41.3

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------
        +V+AVQFVKKTH  ++FSVGKDRLV YWDA+ FELLL LEGHHADVWCLAI+NR                                              
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------

Query:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN
                                               EAE+KR++EY  EK NG ASHFEPNV++LGLSPS YVL ALSNV+
Subjt:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN

XP_022962835.1 WD repeat-containing protein 3-like isoform X2 [Cucurbita moschata]

6.4e-23

41.76

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------
        +V+AVQFVKKTH  ++FSVGKDRLV YWDA+ FELLL LEGHHADVWCLAI+NR                                              
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------

Query:  ---------------------------------------EAEVKRMAEYEKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN
                                               EAE+KR++EYEK NG ASHFEPNV++LGLSPS YVL ALSNV+
Subjt:  ---------------------------------------EAEVKRMAEYEKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN

XP_022972773.1 WD repeat-containing protein 3-like isoform X2 [Cucurbita maxima]

5.4e-22

41.21

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------
        +V+AVQFVKKTH  ++FSVGKDRLV YWDA+ FELLL LEGHHADVWCLAI+NR                                              
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------

Query:  ---------------------------------------EAEVKRMAEYEKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN
                                               EAE+KR++EYEK NG AS FEPNV++LGLSPS YVL ALSNV+
Subjt:  ---------------------------------------EAEVKRMAEYEKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN

XP_023518534.1 WD repeat-containing protein 3-like isoform X2 [Cucurbita pepo subsp. pepo]

2.4e-22

41.76

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------
        +V+AVQFVKKTH  ++FSVGKDRLV YWDA+ FELLL LEGHHADVWCLAI+NR                                              
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------

Query:  ---------------------------------------EAEVKRMAEYEKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN
                                               EAEVKR++EYEK NG ASHFEPNV++LGLSP  YVL ALSNV+
Subjt:  ---------------------------------------EAEVKRMAEYEKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN

XP_038882007.1 WD repeat-containing protein 3 [Benincasa hispida]

1.6e-21

41.85

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------
        +V+AVQFVKKTH  ++FSVGKDRLV YWDA+ FELLL LEGHHADVWCLAI+NR                                              
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------

Query:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN
                                               EAEVKR+AE+  EKRNG ASHFEPN ++LGLSPS YVL ALSNV+
Subjt:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CIM0 WD repeat-containing protein 3

1.7e-21

41.3

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------
        +V+AVQFVKKTH  ++FSVGKDRLV YWDA+ FELLL LEGHHADVWCLAI+NR                                              
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------

Query:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN
                                               EAE KR+AE+  EKRNG ASHFEPN ++LGLSPS YVL ALSNV+
Subjt:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN

A0A5D3C7B4 WD repeat-containing protein 3

1.7e-21

41.3

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------
        +V+AVQFVKKTH  ++FSVGKDRLV YWDA+ FELLL LEGHHADVWCLAI+NR                                              
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------

Query:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN
                                               EAE KR+AE+  EKRNG ASHFEPN ++LGLSPS YVL ALSNV+
Subjt:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN

A0A6J1HG73 WD repeat-containing protein 3-like isoform X2

3.1e-23

41.76

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------
        +V+AVQFVKKTH  ++FSVGKDRLV YWDA+ FELLL LEGHHADVWCLAI+NR                                              
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------

Query:  ---------------------------------------EAEVKRMAEYEKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN
                                               EAE+KR++EYEK NG ASHFEPNV++LGLSPS YVL ALSNV+
Subjt:  ---------------------------------------EAEVKRMAEYEKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN

A0A6J1HI74 WD repeat-containing protein 3-like isoform X1

1.0e-21

41.3

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------
        +V+AVQFVKKTH  ++FSVGKDRLV YWDA+ FELLL LEGHHADVWCLAI+NR                                              
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------

Query:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN
                                               EAE+KR++EY  EK NG ASHFEPNV++LGLSPS YVL ALSNV+
Subjt:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN

A0A6J1IB26 WD repeat-containing protein 3-like isoform X2

2.6e-22

41.21

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------
        +V+AVQFVKKTH  ++FSVGKDRLV YWDA+ FELLL LEGHHADVWCLAI+NR                                              
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------

Query:  ---------------------------------------EAEVKRMAEYEKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN
                                               EAE+KR++EYEK NG AS FEPNV++LGLSPS YVL ALSNV+
Subjt:  ---------------------------------------EAEVKRMAEYEKRNGGASHFEPNVIVLGLSPSYYVLPALSNVN

SwissProt top hits

e value

%identity

Alignment

P87177 Uncharacterized WD repeat-containing protein C3D6.12

1.1e-04

45.1

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAI
        +++ V F   T+  F  S  KDR V YWD + F+L+L L GHH++VW LA+
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAI

Q54S79 WD repeat-containing protein 3 homolog

1.8e-04

37.74

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINN
        +++ V F+  TH     S  KD+ + YWDA+ FE +  +E HH +VW LA+ +
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINN

Q8BHB4 WD repeat-containing protein 3

1.5e-06

44.23

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAIN
        +V+ ++FV K+H    F+ GKD  +  WDA+ FE +  LEGHH ++WCLA++
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAIN

Q9UNX4 WD repeat-containing protein 3

5.1e-07

46.15

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAIN
        +V+ +QFV K+H    F+ GKD  +  WDA+ FE +  LEGHH ++WCLA++
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAIN

Arabidopsis top hits

e value

%identity

Alignment

AT3G21540.1 transducin family protein / WD-40 repeat family protein

2.4e-15

31.69

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Query:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------
        +V+ V+FV+ TH  ++FS+GKDRLV YWDA+ FE LL LEGHHA++WCLAI+NR                                              
Subjt:  TVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNR----------------------------------------------

Query:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNV
                                               E E KR A Y  EK  G    + PN ++ GLSPS YVL A+SNV
Subjt:  ---------------------------------------EAEVKRMAEY--EKRNGGASHFEPNVIVLGLSPSYYVLPALSNV

Sequences

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CDS sequence

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ATGGCTATGAGATCCGACACACTATTCCAAAATGCTAAATCGAAGTTGCTAGAAATTCAGGTCTGGCAGGAAGATACTGAAGTGGTTGGTCGCTGTTACTATCAGCGATG
GCTGCCCCGCCTTGCACCACTGTGGATCGTCAATGCATTTGATTTCGAAGCATGCGCCGCAACCCTGGCCGTTGTTGAACAGCGCCATGCTCAGCGCCGCCGTCTGCAGC
CCATACCCTTCCTTTTCCACATTCGAGCCAAAAGTGAAGGGGTGAAGCGGCATGGACTGATGGCCGTGGACTTGGATGGAGGGAAAAGCCTCAGTCCCTCACTCCCCTCC
CTCAATCTCCGATTCTCCTTACTTTTTTCCCTTCTCTTTTCAGCAGCCGCCGCCTGCCCTAGCGTCTTCCTCTCCTCCCCTTCAGCCGGCGCACTAGTAGCCTTCTTTCG
CCTTCAACGTCGCTGGTGTATAGCCTTTACCATCGCTAGCGTTCGCAGTCGCCGTAGCCGCAGCCTTCGTTGTCATTGCAGTCGTCTTCGCGCTTACTCGCTTTCCCTCC
TCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTTTGCCCCAACGCCTTAATTCATCAAACCGCAAGTCGAAGAGTTCGAACCGCCGGTCTGGAGGTTCGGTCGACTCGGTTT
GTAGCACATACAGGTTTGGATCGATTTTTAGCACGCGCAGGACGGCTCGGTTATTTCCGCCATCAGATCCGGATTGGGTTTATTCCACTATCCTGTCCTGATCGGTCGGC
TTGTTTTTTATGCCTCGCCTGTCCGGATCGTTTTTTCTCTCCAGTCCGGTTCTTTTTACAGGGAGTTGCAGATTGGGCTCGCCGTCTCCGATATACGGATTCGTCGTATA
GCGTCGGCATCGAACAAGGTGGAACAAATGGTGGAGTCTGGTCTCTCTATGGTGGTCGTTCAGTGCAATTGCAGATTGGGATCGTCGTCTCTGACATACTTATTCCTCAA
TTAGCTTCGGCATTGAACTTAAGATCTAATCATTTAAATACTTTTGTTATTGTTCTAATGTTTGCTGCCATACGCTGCAAAACGTTGCCGCGGGCACCGTTAGCGGTTTT
ATTGGTGAAAACTGTCATTGCCGTTCAGTTTGTGAAGAAAACTCACTGCATATTCATATTCAGTGTAGGAAAGGATCGCCTTGTAACATATTGGGATGCTGAAATTTTTG
AGTTGCTTTTAATGCTTGAGGGGCACCATGCTGATGTTTGGTGTCTTGCAATCAACAACCGTGAGGCAGAAGTCAAGCGTATGGCTGAATATGAGAAAAGAAATGGGGGA
GCTTCTCATTTTGAGCCAAATGTTATTGTGCTTGGCCTCTCACCATCTTACTATGTTCTCCCTGCTCTTTCAAATGTTAACTTCTCTTACAAATGA

mRNA sequence

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Protein sequence

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MAMRSDTLFQNAKSKLLEIQVWQEDTEVVGRCYYQRWLPRLAPLWIVNAFDFEACAATLAVVEQRHAQRRRLQPIPFLFHIRAKSEGVKRHGLMAVDLDGGKSLSPSLPS
LNLRFSLLFSLLFSAAAACPSVFLSSPSAGALVAFFRLQRRWCIAFTIASVRSRRSRSLRCHCSRLRAYSLSLLSLSLSLSLSLCPNALIHQTASRRVRTAGLEVRSTRF
VAHTGLDRFLARAGRLGYFRHQIRIGFIPLSCPDRSACFLCLACPDRFFSPVRFFLQGVADWARRLRYTDSSYSVGIEQGGTNGGVWSLYGGRSVQLQIGIVVSDILIPQ
LASALNLRSNHLNTFVIVLMFAAIRCKTLPRAPLAVLLVKTVIAVQFVKKTHCIFIFSVGKDRLVTYWDAEIFELLLMLEGHHADVWCLAINNREAEVKRMAEYEKRNGG
ASHFEPNVIVLGLSPSYYVLPALSNVNFSYK

Sgr026509 (gene) of Monk fruit (Qingpiguo) v1 genome