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Sgr026873 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr026873
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionphotosynthetic NDH subunit of subcomplex B 4, chloroplastic
Genome locationtig00153047:1735170..1737239
RNA-Seq ExpressionSgr026873
SyntenySgr026873
Gene Ontology termsGO:0009773 - photosynthetic electron transport in photosystem I (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR034570 - Photosynthetic NDH subunit of subcomplex B 4, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134651.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Momordica charantia]8.5e-6980.46Show/hide
Query:  INEHYDSREVSQFKVLDMTIVLRFLQLSNSGVFSPRQLPEG---RNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIM
        I  H ++  + Q K    TI+     L NSGVFS  QL E    + RERGS GKVNAFPDWQLMAVLVDH+DGQRDLITHKSIVHLSDEAIKNVYSLYIM
Subjt:  INEHYDSREVSQFKVLDMTIVLRFLQLSNSGVFSPRQLPEG---RNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIM

Query:  FTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        FTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE QEDIEE ARAELWREELIEEIEQKVGGLRELEEAGKK
Subjt:  FTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

XP_022921851.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like [Cucurbita moschata]3.8e-6990.28Show/hide
Query:  SNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGT
        SNSG+F  +QL E   R+RGS GKV+AFPDWQLMAVLVDHLDGQRDL+THKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGT
Subjt:  SNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGT

Query:  GHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        GHWVYEKQEDIEEEARA+LWREELIEEIEQKVGGLRELEEAG+K
Subjt:  GHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

XP_022933404.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Cucurbita moschata]1.2e-7092.41Show/hide
Query:  LSNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG
        L NSGVFS RQL EG  R+RGS G+VNAFPDW LMAVLVDHLDGQRDL+THKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG
Subjt:  LSNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG

Query:  TGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        TGHWVYEKQEDIEE ARAELWREELIEEIEQKVGGLRELEEAGKK
Subjt:  TGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

XP_022972961.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like [Cucurbita maxima]1.4e-6890.34Show/hide
Query:  LSNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG
        L  SG FS RQLPE   R+ GS G+VNAFPDW LMAVLVDHLDGQRDL+THKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG
Subjt:  LSNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG

Query:  TGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        TGHWVYEKQEDIEE ARAELWREELIEEIEQKVGGLRELEEAGKK
Subjt:  TGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

XP_023531594.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]7.4e-7390.79Show/hide
Query:  IVLRFLQLSNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVY
        I L+F+QL NSGVFS RQL EG  R+RGS G+VNAFPDW LMAVLVDHLDGQRDL+THKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVY
Subjt:  IVLRFLQLSNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVY

Query:  RKDGGDGTGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        RKDGGDGTGHWVYEKQEDIEE ARAELWREELIEEIEQKVGGLRELEEAGKK
Subjt:  RKDGGDGTGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

TrEMBL top hitse value%identityAlignment
A0A6J1BYE8 photosynthetic NDH subunit of subcomplex B 4, chloroplastic4.1e-6980.46Show/hide
Query:  INEHYDSREVSQFKVLDMTIVLRFLQLSNSGVFSPRQLPEG---RNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIM
        I  H ++  + Q K    TI+     L NSGVFS  QL E    + RERGS GKVNAFPDWQLMAVLVDH+DGQRDLITHKSIVHLSDEAIKNVYSLYIM
Subjt:  INEHYDSREVSQFKVLDMTIVLRFLQLSNSGVFSPRQLPEG---RNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIM

Query:  FTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        FTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE QEDIEE ARAELWREELIEEIEQKVGGLRELEEAGKK
Subjt:  FTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

A0A6J1E2I6 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like1.8e-6990.28Show/hide
Query:  SNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGT
        SNSG+F  +QL E   R+RGS GKV+AFPDWQLMAVLVDHLDGQRDL+THKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGT
Subjt:  SNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGT

Query:  GHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        GHWVYEKQEDIEEEARA+LWREELIEEIEQKVGGLRELEEAG+K
Subjt:  GHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

A0A6J1EZP2 photosynthetic NDH subunit of subcomplex B 4, chloroplastic5.7e-7192.41Show/hide
Query:  LSNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG
        L NSGVFS RQL EG  R+RGS G+VNAFPDW LMAVLVDHLDGQRDL+THKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG
Subjt:  LSNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG

Query:  TGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        TGHWVYEKQEDIEE ARAELWREELIEEIEQKVGGLRELEEAGKK
Subjt:  TGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

A0A6J1I7D8 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like7.0e-6990.34Show/hide
Query:  LSNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG
        L  SG FS RQLPE   R+ GS G+VNAFPDW LMAVLVDHLDGQRDL+THKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG
Subjt:  LSNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDG

Query:  TGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        TGHWVYEKQEDIEE ARAELWREELIEEIEQKVGGLRELEEAGKK
Subjt:  TGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

A0A6J1JG67 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like9.1e-6989.58Show/hide
Query:  SNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGT
        SNSG+F  +QL E   R+RGS GKV+AFPDWQLMAVLVDHLDGQRDL+THKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGT
Subjt:  SNSGVFSPRQLPEGRNRERGSTGKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGT

Query:  GHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        GHWVYEKQEDIEE ARA+LWREELIEEIEQKVGGLRELEEAG+K
Subjt:  GHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

SwissProt top hitse value%identityAlignment
Q8RXS1 Photosynthetic NDH subunit of subcomplex B 4, chloroplastic1.1e-4767.81Show/hide
Query:  NSGVFSPRQLPEGRNRE--RGSTGKVNAFP-DWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGD
        N G +  + + E R R   RGS     A P D  LMAV+V  ++G RD+IT K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGD
Subjt:  NSGVFSPRQLPEGRNRE--RGSTGKVNAFP-DWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGD

Query:  GTGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        GTG+WVYE QEDIEE+ARAELWREELIEEIEQKVGGLRELEEA  K
Subjt:  GTGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

Arabidopsis top hitse value%identityAlignment
AT1G18730.1 NDH dependent flow 67.9e-4967.81Show/hide
Query:  NSGVFSPRQLPEGRNRE--RGSTGKVNAFP-DWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGD
        N G +  + + E R R   RGS     A P D  LMAV+V  ++G RD+IT K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGD
Subjt:  NSGVFSPRQLPEGRNRE--RGSTGKVNAFP-DWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGD

Query:  GTGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK
        GTG+WVYE QEDIEE+ARAELWREELIEEIEQKVGGLRELEEA  K
Subjt:  GTGHWVYEKQEDIEEEARAELWREELIEEIEQKVGGLRELEEAGKK

AT1G18730.2 NDH dependent flow 63.4e-3166.67Show/hide
Query:  RNRERGSTGKVNAFP-DWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE
        RN  RGS     A P D  LMAV+V  ++G RD+IT K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE
Subjt:  RNRERGSTGKVNAFP-DWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE

AT1G18730.3 NDH dependent flow 61.8e-4873.28Show/hide
Query:  RNRERGSTGKVNAFP-DWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEE
        RN  RGS     A P D  LMAV+V  ++G RD+IT K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE QEDIEE
Subjt:  RNRERGSTGKVNAFP-DWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEE

Query:  EARAELWREELIEEIEQKVGGLRELEEAGKK
        +ARAELWREELIEEIEQKVGGLRELEEA  K
Subjt:  EARAELWREELIEEIEQKVGGLRELEEAGKK

AT1G18730.4 NDH dependent flow 63.4e-3166.67Show/hide
Query:  RNRERGSTGKVNAFP-DWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE
        RN  RGS     A P D  LMAV+V  ++G RD+IT K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE
Subjt:  RNRERGSTGKVNAFP-DWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAACCCGCAATGGGATTTGGGGATAGTGTAGAGAGAAGGGGTGAAATACAAATACATGAGAGTGGTAAAGAAAATCGGCCACACAAACAGAACGTGGATGAAAA
TGTTGACTGGGTTGCTGTGATATGCGCCGTAGAAGGCGAAGTGCCTCTCCAGATCAAACAATCCGCTAATCCCATTAATGAACATTATGATTCGAGGGAGGTAAGCCAGT
TTAAGGTGCTCGACATGACCATTGTATTACGATTCTTGCAGCTTTCAAACTCTGGAGTTTTCAGTCCTCGACAACTGCCTGAAGGTAGAAACCGCGAAAGAGGCTCTACG
GGCAAAGTGAATGCTTTCCCAGATTGGCAATTGATGGCGGTTCTAGTTGATCACCTGGACGGCCAAAGGGACCTTATAACCCACAAGTCCATAGTGCATCTTAGTGATGA
AGCCATTAAAAACGTCTACAGTCTTTACATCATGTTCACTTGTTGGGGATGCTTGTTCTTTGGCTCCATGAAGGATCCATATTATGACTCAGAGGTATACAGGAAAGATG
GAGGAGATGGAACAGGACATTGGGTCTATGAGAAGCAAGAGGACATTGAGGAAGAAGCAAGAGCAGAGTTATGGCGAGAGGAGCTGATTGAGGAGATTGAGCAGAAAGTT
GGAGGACTTAGAGAGCTGGAAGAAGCTGGCAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAACCCGCAATGGGATTTGGGGATAGTGTAGAGAGAAGGGGTGAAATACAAATACATGAGAGTGGTAAAGAAAATCGGCCACACAAACAGAACGTGGATGAAAA
TGTTGACTGGGTTGCTGTGATATGCGCCGTAGAAGGCGAAGTGCCTCTCCAGATCAAACAATCCGCTAATCCCATTAATGAACATTATGATTCGAGGGAGGTAAGCCAGT
TTAAGGTGCTCGACATGACCATTGTATTACGATTCTTGCAGCTTTCAAACTCTGGAGTTTTCAGTCCTCGACAACTGCCTGAAGGTAGAAACCGCGAAAGAGGCTCTACG
GGCAAAGTGAATGCTTTCCCAGATTGGCAATTGATGGCGGTTCTAGTTGATCACCTGGACGGCCAAAGGGACCTTATAACCCACAAGTCCATAGTGCATCTTAGTGATGA
AGCCATTAAAAACGTCTACAGTCTTTACATCATGTTCACTTGTTGGGGATGCTTGTTCTTTGGCTCCATGAAGGATCCATATTATGACTCAGAGGTATACAGGAAAGATG
GAGGAGATGGAACAGGACATTGGGTCTATGAGAAGCAAGAGGACATTGAGGAAGAAGCAAGAGCAGAGTTATGGCGAGAGGAGCTGATTGAGGAGATTGAGCAGAAAGTT
GGAGGACTTAGAGAGCTGGAAGAAGCTGGCAAGAAATAA
Protein sequenceShow/hide protein sequence
MVKPAMGFGDSVERRGEIQIHESGKENRPHKQNVDENVDWVAVICAVEGEVPLQIKQSANPINEHYDSREVSQFKVLDMTIVLRFLQLSNSGVFSPRQLPEGRNRERGST
GKVNAFPDWQLMAVLVDHLDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEEARAELWREELIEEIEQKV
GGLRELEEAGKK