; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr027303 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr027303
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionDNA-directed RNA polymerase III subunit rpc4
Genome locationtig00153048:2922117..2927247
RNA-Seq ExpressionSgr027303
SyntenySgr027303
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007811 - DNA-directed RNA polymerase III subunit RPC4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144123.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis sativus]1.3e-12780.07Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED
        MEQ+PPKN TAA RK+KFAPKAP RRIPKPEVKAE+AEDADAAQARDLLKRFNEST RAKQ+VG+K APTQVAFGSGG+S+++RS+G+ K+GN   R ED
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS
        GTLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPD LNEEEFGEASE +TYDENTTT AM+LGL+EENPE ++ FLQLPPMVP+IKQSS+V  M + +S
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS

Query:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL
         EQ+K SQPRQ +C+++ LPSGS+GKLLVYRSGAVKLK+GDI YDVSSGMDCGFAQ+VAAINVEGK CCIVGELSKR ILTPDVDS+LKN+
Subjt:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL

XP_022147557.1 DNA-directed RNA polymerase III subunit rpc4 [Momordica charantia]1.3e-13585.91Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED
        MEQDPPKNNT AQRKMKFAPKAPPRR+PKPEVKAEI E+ADAAQA+DLLKRFNESTMRAKQKVGKK APTQVAFGSGGTS +IRS+GIPK+GN   R ED
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS
        GTLPSS SKEYVEPWDYYSYYPVTLPLRRPYSG+PD LNEEEFGEASE  TYDE+ TTPAMDLGL+EENPETN+FFLQ+PPMVPV KQSSTV GM AA S
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS

Query:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL
         EQSKGS+ RQN C+L+ LPSGSMGKLLVYRSGAVKLK+GDI YDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKR ILTPDVDS+LK++
Subjt:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL

XP_022968121.1 uncharacterized protein LOC111467450 [Cucurbita maxima]4.6e-12881.79Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T RAKQKVGKK APTQVAFG+GGTS+S+R+FG  K+GN   R ED
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS
        GTLP   S+EYVEPWDYYSYYPVTLPLRRPYSGNPD LNE EFGEASE+ TYDENTTTPAMDLGL+E+NPETNIFFLQLPPMVPV +QSST  GMEAA+S
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS

Query:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL
        LEQ+K SQP Q +C+L+  PSGSMGKLLVYRSGAVKLK+GDI YDVSSGMDCGFAQ++AAINVEGK CCIVGELSKR +LTPDVDS+LKN+
Subjt:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL

XP_023529312.1 uncharacterized protein LOC111792200 [Cucurbita pepo subsp. pepo]5.5e-12981.79Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T RAKQKVGKK APTQVAFG+GGTS+S+R++G  K+GN   + ED
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS
        GTLPSST KEYVEPWDYYSYYPVTLPLRRPYSGNPD LNE EFGEASE+ TYDENTTTPAMDLGL+E+N ETNIFFLQLPPMVPV +QSST   MEAA+S
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS

Query:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL
        LEQ+KGSQP Q +CTL+  PSGSMGKLLVYRSGAVKLK+G+I YDVSSGMDCGFAQ++AAINVEGK CCIVGELSKR +LTPDVDS+LKN+
Subjt:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL

XP_038878504.1 uncharacterized protein LOC120070724 [Benincasa hispida]9.6e-13483.85Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED
        MEQDPPKN TAA RK+KFAPKAP RRIPKPEVKAEIAEDADAAQARDLLKRFNEST+R KQK+G+K APTQVAFGSGGTS+++RS+G+ K+GN   R ED
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS
        GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPD LNEEEFGEASE   YDENTTTPAMDLGL+EENPE ++FFLQLPPMVP++KQSSTV G  AA+S
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS

Query:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL
        LEQSKGSQPRQ +C ++ LPSGSMGKLLVYRSGAVKLK+GDI YDVSSGMDCGFAQDVAA+NVEGK CCIVGELSKR ILTPDVDS+LKN+
Subjt:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL

TrEMBL top hitse value%identityAlignment
A0A0A0LWX7 Uncharacterized protein6.5e-12880.07Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED
        MEQ+PPKN TAA RK+KFAPKAP RRIPKPEVKAE+AEDADAAQARDLLKRFNEST RAKQ+VG+K APTQVAFGSGG+S+++RS+G+ K+GN   R ED
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS
        GTLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPD LNEEEFGEASE +TYDENTTT AM+LGL+EENPE ++ FLQLPPMVP+IKQSS+V  M + +S
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS

Query:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL
         EQ+K SQPRQ +C+++ LPSGS+GKLLVYRSGAVKLK+GDI YDVSSGMDCGFAQ+VAAINVEGK CCIVGELSKR ILTPDVDS+LKN+
Subjt:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL

A0A1S3BPR1 DNA-directed RNA polymerase III subunit RPC47.2e-12779.38Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED
        MEQDPPKN TA  RK+KFAPKAP RR+PKPEVKAE+AED DAAQARDLLKRFNEST RAKQ+VG+K APTQVAFGSGG+S+++RS+G+ K+GN   R ED
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS
        GTLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPD LNEEEFGEASE  TYDENTTT AM+LGL+EENPET++FFLQLPPMVP+IKQSSTV  M + + 
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS

Query:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL
         EQ+  SQ RQ +C+++ LPSGSMGKLLVYRSGAVKLK+GDI YDVSSGMDCGFAQ+VAAIN+EGKHCCIVGELSKR ILTPDVDS+L+N+
Subjt:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL

A0A6J1D2P1 DNA-directed RNA polymerase III subunit rpc46.5e-13685.91Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED
        MEQDPPKNNT AQRKMKFAPKAPPRR+PKPEVKAEI E+ADAAQA+DLLKRFNESTMRAKQKVGKK APTQVAFGSGGTS +IRS+GIPK+GN   R ED
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS
        GTLPSS SKEYVEPWDYYSYYPVTLPLRRPYSG+PD LNEEEFGEASE  TYDE+ TTPAMDLGL+EENPETN+FFLQ+PPMVPV KQSSTV GM AA S
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS

Query:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL
         EQSKGS+ RQN C+L+ LPSGSMGKLLVYRSGAVKLK+GDI YDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKR ILTPDVDS+LK++
Subjt:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL

A0A6J1F0U0 DNA-directed RNA polymerase III subunit RPC4-like1.1e-12781.79Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T RAKQKVGKK APTQVAFG+GGTS+S+R++G  K+GN   R ED
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS
        GTLPS  SKEYVEPWDYYSYYPVTLPLRRPYSGNPD LNE EFGEASE  TYDENTTTPAMDLGL+E+NPETNIFFLQLPPMVPV +QSST  GMEAA+S
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS

Query:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL
        LEQ+K SQP Q +C+L+  PSGSMGKLLVYRSGAVKLK+G+I YDVSSGMDCGFAQ++AAINVEGK CCIVGELSKR +LTPDVDS+LKN+
Subjt:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL

A0A6J1HTZ8 uncharacterized protein LOC1114674502.2e-12881.79Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T RAKQKVGKK APTQVAFG+GGTS+S+R+FG  K+GN   R ED
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS
        GTLP   S+EYVEPWDYYSYYPVTLPLRRPYSGNPD LNE EFGEASE+ TYDENTTTPAMDLGL+E+NPETNIFFLQLPPMVPV +QSST  GMEAA+S
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADS

Query:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL
        LEQ+K SQP Q +C+L+  PSGSMGKLLVYRSGAVKLK+GDI YDVSSGMDCGFAQ++AAINVEGK CCIVGELSKR +LTPDVDS+LKN+
Subjt:  LEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL

SwissProt top hitse value%identityAlignment
O74857 DNA-directed RNA polymerase III subunit rpc45.7e-0423.87Show/hide
Query:  KFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFG----SGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYV
        KF PK  PRR   P  + ++ E        +  K++  S  R K ++ K  A    A G    S GT   I S  +P     +  ++D     + S  + 
Subjt:  KFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFG----SGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYV

Query:  EPWDYYSYYPVTL-PLRRPYSGNPDC-----------------LNEEEFGEASETITY-------DENTTTPAMD-------LGL-----MEENPETNIF
        E  D      + L  L     G  D                   N+E+    +E+  +       DE     A+D       LGL     ME++ +  + 
Subjt:  EPWDYYSYYPVTL-PLRRPYSGNPDC-----------------LNEEEFGEASETITY-------DENTTTPAMD-------LGL-----MEENPETNIF

Query:  FLQLPPMVP---------VIKQSSTVVGMEAADSLEQSKGSQP----RQNSCTLDGL----------PSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDC
         +Q P  +P          +  SS V   EA +  +  +   P    R+N   +D L          P+G +G L V++SG   L++G + + V SG DC
Subjt:  FLQLPPMVP---------VIKQSSTVVGMEAADSLEQSKGSQP----RQNSCTLDGL----------PSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDC

Query:  GFAQDVAAINVEGKHCCIVGELSKRVILTPD
         F Q++A ++ + K    +G   +R+I++PD
Subjt:  GFAQDVAAINVEGKHCCIVGELSKRVILTPD

P05423 DNA-directed RNA polymerase III subunit RPC42.0e-0929.77Show/hide
Query:  ETNIFFLQLPPMVP------VIKQSSTVV----GMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAA
        E  + FLQLP  +P       IK   T V    G       E+ + ++  +N+CTL  L  G +GKLL+ +SG V+L +G +  DV+ G  C F Q++ +
Subjt:  ETNIFFLQLPPMVP------VIKQSSTVV----GMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAA

Query:  INVEGK---HCCIVGELSKRVILTPDVDSIL
        + +         ++G +  +++ +PD +S+L
Subjt:  INVEGK---HCCIVGELSKRVILTPDVDSIL

P25441 DNA-directed RNA polymerase III subunit RPC41.4e-0524.41Show/hide
Query:  MEENPETNIFFLQLPPMV-----PVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLP-SGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVA
        M   PE  + F QLP  +     P +K+    +  +A+D  ++ K  + +     L     +G +G + V++SG + +KIG++  D+  G +  F QDV 
Subjt:  MEENPETNIFFLQLPPMV-----PVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLP-SGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVA

Query:  AINV--EGKHCCIVGELSKRVILTPDV
        A+++  +     ++G +  ++++TP +
Subjt:  AINV--EGKHCCIVGELSKRVILTPDV

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC42.0e-0930.53Show/hide
Query:  ETNIFFLQLPPMVP------VIKQSSTVVGMEAADS--LEQSKGSQPR--QNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAA
        E  + FLQLP  +P       IK   T V  E      ++Q K  + R  +N+CTL  L  G +GKLL+ +SG V+L +G +  DV+ G  C F Q++ +
Subjt:  ETNIFFLQLPPMVP------VIKQSSTVVGMEAADS--LEQSKGSQPR--QNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAA

Query:  INVEGKH---CCIVGELSKRVILTPDVDSIL
        + +         ++G +  +++ +P+ +S+L
Subjt:  INVEGKH---CCIVGELSKRVILTPDVDSIL

Q91WD1 DNA-directed RNA polymerase III subunit RPC49.1e-1029.29Show/hide
Query:  DLGLMEENPETNIFFLQLPPMVP------VIKQSSTVV----GMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMD
        +L LM++     + FLQLP  +P       IK   T V    G       E+ + ++  +N+CTL  L  G +GKLL+ +SG V+L +G +  DV+ G  
Subjt:  DLGLMEENPETNIFFLQLPPMVP------VIKQSSTVV----GMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMD

Query:  CGFAQDVAAINVEGK---HCCIVGELSKRVILTPDVDSIL
        C F Q++ ++ +         ++G +  +++ +PD +S+L
Subjt:  CGFAQDVAAINVEGK---HCCIVGELSKRVILTPDVDSIL

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC41.0e-4035.86Show/hide
Query:  AQRKMKFAPKAPPRRIP-KPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNS----------------
        ++R+ +  P  P RR+P  P    E  ED +  +A    ++F+   +  + K   K +  +VAF    +  +IRSFG+PK  +                 
Subjt:  AQRKMKFAPKAPPRRIP-KPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNS----------------

Query:  ----STRREDG----TLPSSTSKEYVEPWDY-YSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLME-ENPETNIFFLQLPPMVP
            +  +EDG       + T  +YVEPWDY  SYYP  LPLR+P SG+ + L++EEFGE ++   YDENT   A +LGL   ++ +  +F  ++P  +P
Subjt:  ----STRREDG----TLPSSTSKEYVEPWDY-YSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLME-ENPETNIFFLQLPPMVP

Query:  VIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDV
        V+KQ++      +    E S G      S   +GLP G MGK+LVY+SGAVKLK+GD  +DVS G       DV AI+++G++C  +G  +K V +TPDV
Subjt:  VIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDV

Query:  DSIL
        +S+L
Subjt:  DSIL

AT5G09380.1 RNA polymerase III RPC46.1e-6247.28Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAED-ADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRE
        MEQ PP       RKMKFAPKAPP+R+PKPEVK E+ ED +++AQA +LL+R NE ++R K K  KKV  +QVA+  GG   S RS       N    R 
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAED-ADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRRE

Query:  DGTLPSSTSK--EYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEA
        +G   S++++  EY EPWDYYSYYP+TLP+RRPY+G+P+ L+ EEF +A     + E++   A +LGLME++ E  +FF++L P VP+   S+    +E 
Subjt:  DGTLPSSTSK--EYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEA

Query:  ADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL
          +++        + +  L  LP G MGKLLVY+SGAVK+K+G++ YDVS G+   FAQDV  +N E K+CC+VG++ K  +LTPD+DSILK++
Subjt:  ADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAGATCCTCCCAAGAACAATACAGCTGCCCAAAGGAAGATGAAATTTGCTCCAAAAGCACCTCCTCGTCGTATACCAAAACCTGAAGTGAAAGCAGAAATTGC
GGAGGATGCCGACGCAGCTCAGGCCAGGGATTTGCTAAAGCGCTTCAATGAAAGTACCATGAGGGCAAAGCAAAAAGTTGGAAAAAAAGTGGCACCTACACAAGTTGCAT
TTGGTTCTGGAGGTACGTCAACCTCCATAAGATCATTCGGTATTCCAAAATCTGGAAATAGTAGTACCAGACGTGAAGATGGAACTCTTCCGTCTAGTACAAGCAAGGAG
TATGTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTTTGCGGAGACCATATTCAGGAAATCCAGATTGTCTTAACGAGGAAGAATTTGGAGAGGCTTC
AGAAACCATAACATATGATGAAAATACAACAACTCCAGCAATGGATCTTGGTCTAATGGAGGAGAATCCAGAAACAAACATCTTTTTTCTTCAATTACCACCCATGGTGC
CTGTGATAAAGCAATCTTCTACTGTAGTAGGCATGGAGGCAGCCGACAGCTTGGAACAAAGTAAGGGTTCACAACCTCGACAGAACTCCTGCACTTTGGATGGGTTACCT
TCTGGCTCCATGGGTAAATTGCTTGTATACAGGAGTGGTGCTGTCAAGTTGAAGATTGGCGATATTGCATATGACGTTTCTTCTGGAATGGATTGTGGCTTTGCACAAGA
TGTTGCAGCTATCAACGTGGAAGGGAAGCATTGCTGCATTGTTGGAGAGCTTAGCAAGCGTGTGATTTTAACGCCAGATGTGGACTCAATCTTAAAAAATCTTCTCTCTC
CTCCTGTTCTTGACTGTTGGAACAAATCTGCCACACACAAAGACACAAGTCAATCATCAAGAATAGATGGGAAGCCAAACAAAGTTTATGAAAAAGAGAAATGGGACCTG
AAACCAGGAAGATACAAGGTGTGCATGGCTTCAAGAGTAAGAACAGTGAGTTGTTTCAGAAGTTCAAAAATCTTCTTCCCTTCTTCAAAGTTGGAGCCAAATGCAGCCCG
AGATAAAACATCTGCGGTTAGCCTCTGGATTTCGGGCCACACATCCACTTCACCGCTGTTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAGATCCTCCCAAGAACAATACAGCTGCCCAAAGGAAGATGAAATTTGCTCCAAAAGCACCTCCTCGTCGTATACCAAAACCTGAAGTGAAAGCAGAAATTGC
GGAGGATGCCGACGCAGCTCAGGCCAGGGATTTGCTAAAGCGCTTCAATGAAAGTACCATGAGGGCAAAGCAAAAAGTTGGAAAAAAAGTGGCACCTACACAAGTTGCAT
TTGGTTCTGGAGGTACGTCAACCTCCATAAGATCATTCGGTATTCCAAAATCTGGAAATAGTAGTACCAGACGTGAAGATGGAACTCTTCCGTCTAGTACAAGCAAGGAG
TATGTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTTTGCGGAGACCATATTCAGGAAATCCAGATTGTCTTAACGAGGAAGAATTTGGAGAGGCTTC
AGAAACCATAACATATGATGAAAATACAACAACTCCAGCAATGGATCTTGGTCTAATGGAGGAGAATCCAGAAACAAACATCTTTTTTCTTCAATTACCACCCATGGTGC
CTGTGATAAAGCAATCTTCTACTGTAGTAGGCATGGAGGCAGCCGACAGCTTGGAACAAAGTAAGGGTTCACAACCTCGACAGAACTCCTGCACTTTGGATGGGTTACCT
TCTGGCTCCATGGGTAAATTGCTTGTATACAGGAGTGGTGCTGTCAAGTTGAAGATTGGCGATATTGCATATGACGTTTCTTCTGGAATGGATTGTGGCTTTGCACAAGA
TGTTGCAGCTATCAACGTGGAAGGGAAGCATTGCTGCATTGTTGGAGAGCTTAGCAAGCGTGTGATTTTAACGCCAGATGTGGACTCAATCTTAAAAAATCTTCTCTCTC
CTCCTGTTCTTGACTGTTGGAACAAATCTGCCACACACAAAGACACAAGTCAATCATCAAGAATAGATGGGAAGCCAAACAAAGTTTATGAAAAAGAGAAATGGGACCTG
AAACCAGGAAGATACAAGGTGTGCATGGCTTCAAGAGTAAGAACAGTGAGTTGTTTCAGAAGTTCAAAAATCTTCTTCCCTTCTTCAAAGTTGGAGCCAAATGCAGCCCG
AGATAAAACATCTGCGGTTAGCCTCTGGATTTCGGGCCACACATCCACTTCACCGCTGTTGCCTTGA
Protein sequenceShow/hide protein sequence
MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKE
YVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLP
SGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNLLSPPVLDCWNKSATHKDTSQSSRIDGKPNKVYEKEKWDL
KPGRYKVCMASRVRTVSCFRSSKIFFPSSKLEPNAARDKTSAVSLWISGHTSTSPLLP