CuGenDBv2

Gene ID	Sgr027585
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	Mitochondrial
Genome location	tig00153055:945434..947489
RNA-Seq Expression	Sgr027585
Synteny	Sgr027585
Gene Ontology terms	GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
InterPro domains	IPR019716 - Ribosomal protein L53, mitochondrial

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7024167.1 hypothetical protein SDJN02_12980, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-63

77.59

Show/hide

Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKV+IEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTP+QTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELHQHAPSIKVHLQVLVSLIGRIGPLLHLNFMLLTHTPCTSCCSLEKQKTSSNFVTIDLITDGPE
        TWPVIIP+EEL+Q APSIKV L +L        PL                  LEKQKTSSNF+T+D IT+ PE
Subjt:  TWPVIIPEEELHQHAPSIKVHLQVLVSLIGRIGPLLHLNFMLLTHTPCTSCCSLEKQKTSSNFVTIDLITDGPE

XP_022974805.1 uncharacterized protein LOC111473560 isoform X1 [Cucurbita maxima]

2.3e-56

95.8

Show/hide

Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQI VTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELHQHAPSIK
        TWPVIIP+EEL+Q APSIK
Subjt:  TWPVIIPEEELHQHAPSIK

XP_022974807.1 uncharacterized protein LOC111473560 isoform X2 [Cucurbita maxima]

2.3e-56

91.94

Show/hide

Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQI VTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELHQHAPSIKVHLQV
        TWPVIIP+EEL+Q APSIK    +
Subjt:  TWPVIIPEEELHQHAPSIKVHLQV

XP_022974808.1 uncharacterized protein LOC111473560 isoform X3 [Cucurbita maxima]

7.9e-57

94.26

Show/hide

Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQI VTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELHQHAPSIKVHL
        TWPVIIP+EEL+Q APSIK+ L
Subjt:  TWPVIIPEEELHQHAPSIKVHL

XP_023536065.1 uncharacterized protein LOC111797318 [Cucurbita pepo subsp. pepo]

1.3e-56

91.94

Show/hide

Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVK+EFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRN ILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELHQHAPSIKVHLQV
        TWPVIIP+EEL+Q APSIK    +
Subjt:  TWPVIIPEEELHQHAPSIKVHLQV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CC86 uncharacterized protein LOC111010210

2.5e-56

94.96

Show/hide

Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELHQHAPSIK
        TWP++IPEEEL Q  PSIK
Subjt:  TWPVIIPEEELHQHAPSIK

A0A6J1IB98 uncharacterized protein LOC111473560 isoform X2

1.1e-56

91.94

Show/hide

Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQI VTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELHQHAPSIKVHLQV
        TWPVIIP+EEL+Q APSIK    +
Subjt:  TWPVIIPEEELHQHAPSIKVHLQV

A0A6J1IEW0 uncharacterized protein LOC111473560 isoform X1

1.1e-56

95.8

Show/hide

Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQI VTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELHQHAPSIK
        TWPVIIP+EEL+Q APSIK
Subjt:  TWPVIIPEEELHQHAPSIK

A0A6J1IHE6 uncharacterized protein LOC111473560 isoform X3

3.8e-57

94.26

Show/hide

Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQI VTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELHQHAPSIKVHL
        TWPVIIP+EEL+Q APSIK+ L
Subjt:  TWPVIIPEEELHQHAPSIKVHL

A0A6J1IZE5 uncharacterized protein LOC111481279

3.6e-55

94.12

Show/hide

Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIR  ILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELHQHAPSIK
        TWPVIIP+EEL+   PSIK
Subjt:  TWPVIIPEEELHQHAPSIK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G39600.1 CONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

4.0e-51

80.67

Show/hide

Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKV+IEFN LDPRLASC+EFLAQCNARKAKESNP CQ++VKRRTD+ PPQI VTFVNGVEE FDA +T AQ+IR MIL+KGQ LETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELHQHAPSIK
         WPVIIP+EEL Q AP +K
Subjt:  TWPVIIPEEELHQHAPSIK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGAAGTTCCTGTCTAAAGTGAAGATCGAATTCAATGCCCTGGATCCACGCTTAGCGTCGTGCATGGAATTCTTGGCGCAGTGTAATGCTCGCAAGGCGAAGGAATC
CAACCCCGCTTGCCAGTTGATCGTGAAGCGCCGAACGGACGACCACCCGCCCCAGATCGCCGTCACTTTCGTCAATGGAGTTGAAGAGGTTTTCGACGCTACCTCTACTC
CTGCTCAAACAATTAGGAATATGATTCTTGAAAAGGGCCAACTCCTAGAGACCGAGCAAATGTTCCGAGAAGCTGGGGAAACTTGGCCAGTTATCATCCCCGAGGAGGAG
CTTCATCAACATGCTCCCAGTATCAAGGTTCATTTGCAAGTTCTTGTATCGTTAATTGGCAGAATTGGCCCTCTACTGCATTTGAATTTCATGTTATTGACTCACACTCC
TTGTACTTCTTGCTGCAGCCTAGAAAAGCAGAAGACAAGCAGTAACTTTGTCACAATTGATCTGATTACGGATGGACCTGAAGGAGACGTACATGCTGTCCTCCCAACCT
TGGGCTGTCAACAATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGETWPVIIPEEE
LHQHAPSIKVHLQVLVSLIGRIGPLLHLNFMLLTHTPCTSCCSLEKQKTSSNFVTIDLITDGPEGDVHAVLPTLGCQQ

Sgr027585 (gene) of Monk fruit (Qingpiguo) v1 genome