CuGenDBv2

Gene ID	Sgr027739
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	F-box protein GID2-like
Genome location	tig00153055:2184132..2184662
RNA-Seq Expression	Sgr027739
Synteny	Sgr027739
Gene Ontology terms	GO:0009740 - gibberellic acid mediated signaling pathway (biological process) GO:0009845 - seed germination (biological process) GO:0010162 - seed dormancy process (biological process) GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily IPR045118 - F-box only protein FBXO9/FBXO48

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6608444.1 F-box protein GID2, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-80

84.92

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Query:  MKRLLSDGDGDRKMGKKLRAETEDC-----GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV
        MKRL+ DGDG+RKMGKKLR ++ DC     G AS +TGFVNLDDNLLFEVFKHVDA TLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV
Subjt:  MKRLLSDGDGDRKMGKKLRAETEDC-----GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV

Query:  VLALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR
        VLALGGFRRLHSLFIWPLTKPQ+ S+++S++SS+SSS WS FPAMIGSKPP RWGKDEVHLSLSLLSIRYYEKMNFSNR
Subjt:  VLALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR

KAG7037780.1 F-box protein GID2, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.8e-80

84.44

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Query:  MKRLLSDGDGDRKMGKKLRAETEDC------GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRS
        MKRL+ DGDG+RKMGKKLR ++ DC      G AS +TGFVNLDDNLLFEVFKHVDA TLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRS
Subjt:  MKRLLSDGDGDRKMGKKLRAETEDC------GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRS

Query:  VVLALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR
        VVLALGGFRRLHSLFIWPLTKPQ+ S+++S++SS+SSS WS FPAMIGSKPP RWGKDEVHLSLSLLSIRYYEKMNFSNR
Subjt:  VVLALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR

XP_008452610.1 PREDICTED: F-box protein GID2-like [Cucumis melo]

1.3e-82

85.26

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Query:  MKRLLSDGDGDRKMGKKLRAETEDC-----GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV
        MKR++SDG GDRKMGKK +AET+D       + S KTGF+NLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV
Subjt:  MKRLLSDGDGDRKMGKKLRAETEDC-----GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV

Query:  VLALGGFRRLHSLFIWPLTKPQSS---------SSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        VLALGGFRRLHSLFIWPLTKPQSS         SSTSSSASS+SS+SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
Subjt:  VLALGGFRRLHSLFIWPLTKPQSS---------SSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR

XP_011654137.1 F-box protein GID2 [Cucumis sativus]

1.5e-81

84.21

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Query:  MKRLLSDGDGDRKMGKKLRAETEDC------GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRS
        MKR++ DG GDRKMGKK +AET+D        + S KTGF+NLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRS
Subjt:  MKRLLSDGDGDRKMGKKLRAETEDC------GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRS

Query:  VVLALGGFRRLHSLFIWPLTKPQ--------SSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        VVLALGGFRRLHSLFIWPLTKPQ        SSSS+SSSASS+SS+SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
Subjt:  VVLALGGFRRLHSLFIWPLTKPQ--------SSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR

XP_038900230.1 F-box protein GID2 [Benincasa hispida]

8.4e-85

89.5

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Query:  MKRLLSDGDGDRKMGKKLRAETEDC---GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVL
        MKR++ DGDGDRK GKK RAET+DC   G+ S +TGF+NLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVL
Subjt:  MKRLLSDGDGDRKMGKKLRAETEDC---GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVL

Query:  ALGGFRRLHSLFIWPLTKPQ---SSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRG
        ALGGFRRLHSLFIWPLTKPQ   SSSSTSSSASS+SS+SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRG
Subjt:  ALGGFRRLHSLFIWPLTKPQ---SSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L2H5 F-box domain-containing protein

7.1e-82

84.21

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Query:  MKRLLSDGDGDRKMGKKLRAETEDC------GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRS
        MKR++ DG GDRKMGKK +AET+D        + S KTGF+NLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRS
Subjt:  MKRLLSDGDGDRKMGKKLRAETEDC------GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRS

Query:  VVLALGGFRRLHSLFIWPLTKPQ--------SSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        VVLALGGFRRLHSLFIWPLTKPQ        SSSS+SSSASS+SS+SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
Subjt:  VVLALGGFRRLHSLFIWPLTKPQ--------SSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR

A0A1S3BV18 F-box protein GID2-like

6.5e-83

85.26

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Query:  MKRLLSDGDGDRKMGKKLRAETEDC-----GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV
        MKR++SDG GDRKMGKK +AET+D       + S KTGF+NLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV
Subjt:  MKRLLSDGDGDRKMGKKLRAETEDC-----GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV

Query:  VLALGGFRRLHSLFIWPLTKPQSS---------SSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        VLALGGFRRLHSLFIWPLTKPQSS         SSTSSSASS+SS+SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
Subjt:  VLALGGFRRLHSLFIWPLTKPQSS---------SSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR

A0A5A7VFE5 F-box protein GID2-like

6.5e-83

85.26

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Query:  MKRLLSDGDGDRKMGKKLRAETEDC-----GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV
        MKR++SDG GDRKMGKK +AET+D       + S KTGF+NLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV
Subjt:  MKRLLSDGDGDRKMGKKLRAETEDC-----GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV

Query:  VLALGGFRRLHSLFIWPLTKPQSS---------SSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        VLALGGFRRLHSLFIWPLTKPQSS         SSTSSSASS+SS+SWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
Subjt:  VLALGGFRRLHSLFIWPLTKPQSS---------SSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR

A0A6J1ILD7 F-box protein GID2-like

3.0e-80

86.11

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Query:  MKRLLSDGDGDRKMGKKLRAETEDC--GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLA
        MKR++ +G GDRK  KK RA + DC  G  S KTGF+NLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLA
Subjt:  MKRLLSDGDGDRKMGKKLRAETEDC--GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLA

Query:  LGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSS--WSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR
        LGGFRRLHSLFIWPLTKPQSSSS+SSS SS++SSS  WSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNF +RGR
Subjt:  LGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSS--WSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR

A0A6J1J293 F-box protein GID2-like

2.3e-80

83.52

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Query:  MKRLLSDGDGDRKMGKKLRAETEDC--------GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQL
        MKRL+ DGDG+RKMGKKLR ++ DC        G AS +TGFVNLDDNLLFEVFKHVDA TLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQL
Subjt:  MKRLLSDGDGDRKMGKKLRAETEDC--------GEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQL

Query:  RSVVLALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR
        RSVVLALGGFRRLHSLFIWPLTKPQ+ S+++S++SS+SSS WS FPAMIGSKPP RWGKDEVHLSLSLLSIRYYEKMNFSNR
Subjt:  RSVVLALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR

SwissProt top hits

e value

%identity

Alignment

Q7XAK4 F-box protein GID2

9.8e-28

Show/hide

Query:  EDCGEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQSSSST
        ED GE  Q     +L ++L+FEV +  +ARTLA AACVS+ W + AEDERLWE  C R WAN G   +QLR+VVL+LGGFRRLH+++I PL         
Subjt:  EDCGEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQSSSST

Query:  SSSASSASSSSW--SPFPAMIGSK-PPARWGKDEVHLSLSLLSIRYYEKM
                   W  +  P   G + PP R G+D+V LSLSL SI +++ M
Subjt:  SSSASSASSSSW--SPFPAMIGSK-PPARWGKDEVHLSLSLLSIRYYEKM

Q9LUB6 F-box protein SNE

1.1e-10

29.63

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Query:  VNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSW
        +N   ++L E+ + +D  +L  AACV + W   A ++ +WE +C R  +     +  LRSVV ALGG+R L+ L I P                      
Subjt:  VNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSW

Query:  SPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKM
             ++   P   W +D++ LSLSL  + YYE++
Subjt:  SPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKM

Q9STX3 F-box protein GID2

1.4e-47

55.06

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Query:  MKRLLSD----GDGDRKMGKKLRAETEDCGEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVV
        MKR  +D    GD   +  KK+++  E      ++ GF NLD+NL++EV KHVDA+TLAM++CVSK WHKTA+DERLWELICTRHW N GCG  QLRSVV
Subjt:  MKRLLSD----GDGDRKMGKKLRAETEDCGEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVV

Query:  LALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR
        LALGGFRRLHSL++WPL+KP                            P AR+GKDE+ L+LSLLSIRYYEKM+F+ R
Subjt:  LALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR

Arabidopsis top hits

e value

%identity

Alignment

AT1G21760.1 F-box protein 7

2.7e-04

Show/hide

Query:  LDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTG
        L D LLFEVF  +    L  A+CV ++W  T  +   W   C + W   G
Subjt:  LDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTG

AT4G24210.1 F-box family protein

1.0e-48

55.06

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Query:  MKRLLSD----GDGDRKMGKKLRAETEDCGEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVV
        MKR  +D    GD   +  KK+++  E      ++ GF NLD+NL++EV KHVDA+TLAM++CVSK WHKTA+DERLWELICTRHW N GCG  QLRSVV
Subjt:  MKRLLSD----GDGDRKMGKKLRAETEDCGEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVV

Query:  LALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR
        LALGGFRRLHSL++WPL+KP                            P AR+GKDE+ L+LSLLSIRYYEKM+F+ R
Subjt:  LALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR

AT5G48170.1 F-box family protein

7.7e-12

29.63

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Query:  VNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSW
        +N   ++L E+ + +D  +L  AACV + W   A ++ +WE +C R  +     +  LRSVV ALGG+R L+ L I P                      
Subjt:  VNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQSSSSTSSSASSASSSSW

Query:  SPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKM
             ++   P   W +D++ LSLSL  + YYE++
Subjt:  SPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKM

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGCGACTTCTTTCGGATGGTGATGGGGATCGCAAGATGGGGAAGAAACTCAGGGCGGAGACCGAAGATTGTGGAGAAGCCTCCCAGAAGACTGGATTTGTGAATTT
GGATGATAATTTACTGTTCGAGGTGTTTAAGCATGTGGATGCGAGGACGCTGGCCATGGCGGCATGTGTAAGCAAGCAATGGCACAAGACGGCCGAAGATGAGCGGCTTT
GGGAGCTGATCTGCACCAGGCACTGGGCCAACACCGGCTGCGGCAACCAACAACTACGATCTGTAGTTCTGGCGCTCGGTGGGTTCCGTCGTCTCCACTCGCTCTTCATC
TGGCCTCTCACAAAACCACAGTCATCCTCCTCGACATCTTCATCTGCTTCGTCGGCTTCGTCGTCGTCTTGGTCTCCATTTCCGGCGATGATTGGGTCGAAGCCGCCGGC
TCGGTGGGGAAAGGATGAGGTCCATCTCTCACTCTCGCTTCTCTCAATTCGTTACTACGAGAAGATGAATTTCAGCAACAGAGGCAGATGA

mRNA sequence

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Protein sequence

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MKRLLSDGDGDRKMGKKLRAETEDCGEASQKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFI
WPLTKPQSSSSTSSSASSASSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR

Sgr027739 (gene) of Monk fruit (Qingpiguo) v1 genome