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Sgr027757 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr027757
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionRRM domain-containing protein
Genome locationtig00153055:2302899..2303267
RNA-Seq ExpressionSgr027757
SyntenySgr027757
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064439.1 uncharacterized protein E6C27_scaffold255G001510 [Cucumis melo var. makuwa]4.8e-3984.07Show/hide
Query:  MTSAEQPLKKRRNYGP-APE-PTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL
        M SAEQPLKKRRNYGP APE P PLPQL QPPPPQ    DQTS APSP TPPQLSQAEIL+RRRNRDEIRSVYEC+KRIRFFLSQKEKGA TPDIEQAYL
Subjt:  MTSAEQPLKKRRNYGP-APE-PTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL

Query:  SLITASRGQCSIR
        SLITASRG  S++
Subjt:  SLITASRGQCSIR

XP_004141403.1 uncharacterized protein LOC101209442 [Cucumis sativus]3.3e-4084.96Show/hide
Query:  MTSAEQPLKKRRNYGP-APEPT-PLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL
        M SAEQPLKKRRNYGP APEP+ PLPQL QPPPPQ    DQTS APSPPTPPQLSQAEIL+RRRNRDEIRSVYEC+KRIRFFLSQKEKGA TPDIEQAYL
Subjt:  MTSAEQPLKKRRNYGP-APEPT-PLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL

Query:  SLITASRGQCSIR
        SLITASRG  S++
Subjt:  SLITASRGQCSIR

XP_016901291.1 PREDICTED: uncharacterized protein LOC103493893 [Cucumis melo]4.8e-3984.07Show/hide
Query:  MTSAEQPLKKRRNYGP-APE-PTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL
        M SAEQPLKKRRNYGP APE P PLPQL QPPPPQ    DQTS APSP TPPQLSQAEIL+RRRNRDEIRSVYEC+KRIRFFLSQKEKGA TPDIEQAYL
Subjt:  MTSAEQPLKKRRNYGP-APE-PTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL

Query:  SLITASRGQCSIR
        SLITASRG  S++
Subjt:  SLITASRGQCSIR

XP_022140294.1 uncharacterized protein LOC111010994 [Momordica charantia]4.8e-3981.42Show/hide
Query:  MTSAEQPLKKRRNYGPAPEPTPLPQLAQP--PPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL
        M SAEQPLKKRRNYGP+ E  PLPQ AQP  PPP+ L  DQTSAAP PPTPPQLS AEIL+RRRNRDEIRSVYECYKRIRFFLS+KEKGA TPDIEQAYL
Subjt:  MTSAEQPLKKRRNYGPAPEPTPLPQLAQP--PPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL

Query:  SLITASRGQCSIR
        SLITASRG  S++
Subjt:  SLITASRGQCSIR

XP_038897590.1 uncharacterized protein LOC120085597 [Benincasa hispida]4.8e-3984.07Show/hide
Query:  MTSAEQPLKKRRNYG-PAPE-PTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL
        M SAEQPLKKRRNYG PAPE P PLPQL QPPPPQ    DQ SAAPSPPTPPQLSQAEIL+RRRNRDEIRSVY C+KRIRFFLSQKEKGA TPDIEQAYL
Subjt:  MTSAEQPLKKRRNYG-PAPE-PTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL

Query:  SLITASRGQCSIR
        SLITASRG  S++
Subjt:  SLITASRGQCSIR

TrEMBL top hitse value%identityAlignment
A0A0A0L3T0 SPOC domain-containing protein1.6e-4084.96Show/hide
Query:  MTSAEQPLKKRRNYGP-APEPT-PLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL
        M SAEQPLKKRRNYGP APEP+ PLPQL QPPPPQ    DQTS APSPPTPPQLSQAEIL+RRRNRDEIRSVYEC+KRIRFFLSQKEKGA TPDIEQAYL
Subjt:  MTSAEQPLKKRRNYGP-APEPT-PLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL

Query:  SLITASRGQCSIR
        SLITASRG  S++
Subjt:  SLITASRGQCSIR

A0A1S4DZ72 uncharacterized protein LOC1034938932.3e-3984.07Show/hide
Query:  MTSAEQPLKKRRNYGP-APE-PTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL
        M SAEQPLKKRRNYGP APE P PLPQL QPPPPQ    DQTS APSP TPPQLSQAEIL+RRRNRDEIRSVYEC+KRIRFFLSQKEKGA TPDIEQAYL
Subjt:  MTSAEQPLKKRRNYGP-APE-PTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL

Query:  SLITASRGQCSIR
        SLITASRG  S++
Subjt:  SLITASRGQCSIR

A0A5D3D9I2 SPOC domain-containing protein2.3e-3984.07Show/hide
Query:  MTSAEQPLKKRRNYGP-APE-PTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL
        M SAEQPLKKRRNYGP APE P PLPQL QPPPPQ    DQTS APSP TPPQLSQAEIL+RRRNRDEIRSVYEC+KRIRFFLSQKEKGA TPDIEQAYL
Subjt:  MTSAEQPLKKRRNYGP-APE-PTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL

Query:  SLITASRGQCSIR
        SLITASRG  S++
Subjt:  SLITASRGQCSIR

A0A6J1CFA8 uncharacterized protein LOC1110109942.3e-3981.42Show/hide
Query:  MTSAEQPLKKRRNYGPAPEPTPLPQLAQP--PPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL
        M SAEQPLKKRRNYGP+ E  PLPQ AQP  PPP+ L  DQTSAAP PPTPPQLS AEIL+RRRNRDEIRSVYECYKRIRFFLS+KEKGA TPDIEQAYL
Subjt:  MTSAEQPLKKRRNYGPAPEPTPLPQLAQP--PPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYL

Query:  SLITASRGQCSIR
        SLITASRG  S++
Subjt:  SLITASRGQCSIR

A0A6J1FRD2 uncharacterized protein LOC1114462207.2e-3374.77Show/hide
Query:  MTSAEQPLKKRRNYGPAPEPTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYLSL
        M SAEQPLKKRRNY P     P      PP PQTL  DQTS AP PPTPP LSQAEIL+RRRNRD+IRSVY+C+KRIRFFLSQKEKGA TPDIEQAYLSL
Subjt:  MTSAEQPLKKRRNYGPAPEPTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYLSL

Query:  ITASRGQCSIR
        ITASRG  S++
Subjt:  ITASRGQCSIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27750.1 nucleic acid binding7.7e-1947.86Show/hide
Query:  MTSAEQPLKKRRNYGPAPEPTPLPQLAQPPPPQTLQQDQT---SAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAY
        M  AEQP+KKRR Y   PE  P      PPPPQ   Q  +   S+ P+P TP   SQ EI  R RNR+EIR V++CYKR++  ++Q++ G R+ ++EQAY
Subjt:  MTSAEQPLKKRRNYGPAPEPTPLPQLAQPPPPQTLQQDQT---SAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAY

Query:  LSLITASRGQCSIRFLL
         SLI+ASRG  S++ L+
Subjt:  LSLITASRGQCSIRFLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCGGCGGAGCAGCCTCTGAAGAAGCGCCGGAACTACGGACCCGCACCAGAACCGACGCCACTTCCGCAGTTGGCTCAGCCACCGCCACCACAAACCCTGCAGCA
GGACCAGACATCCGCCGCCCCATCGCCTCCTACTCCACCACAGCTGTCCCAAGCGGAAATCCTTGTCAGAAGGAGGAACAGAGATGAGATTAGAAGTGTCTATGAATGTT
ATAAGCGAATTAGGTTTTTCCTTTCCCAGAAAGAGAAGGGCGCTCGCACACCTGATATTGAGCAGGCATATCTTTCTCTCATCACTGCTTCGAGGGGTCAGTGCTCTATT
CGCTTCCTCCTTCTTGGCACTTTATATCCTTTACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCTCGGCGGAGCAGCCTCTGAAGAAGCGCCGGAACTACGGACCCGCACCAGAACCGACGCCACTTCCGCAGTTGGCTCAGCCACCGCCACCACAAACCCTGCAGCA
GGACCAGACATCCGCCGCCCCATCGCCTCCTACTCCACCACAGCTGTCCCAAGCGGAAATCCTTGTCAGAAGGAGGAACAGAGATGAGATTAGAAGTGTCTATGAATGTT
ATAAGCGAATTAGGTTTTTCCTTTCCCAGAAAGAGAAGGGCGCTCGCACACCTGATATTGAGCAGGCATATCTTTCTCTCATCACTGCTTCGAGGGGTCAGTGCTCTATT
CGCTTCCTCCTTCTTGGCACTTTATATCCTTTACAGTAG
Protein sequenceShow/hide protein sequence
MTSAEQPLKKRRNYGPAPEPTPLPQLAQPPPPQTLQQDQTSAAPSPPTPPQLSQAEILVRRRNRDEIRSVYECYKRIRFFLSQKEKGARTPDIEQAYLSLITASRGQCSI
RFLLLGTLYPLQ