CuGenDBv2

Gene ID	Sgr027862
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	DNA-directed RNA polymerase subunit beta
Genome location	tig00153055:3316204..3329188
RNA-Seq Expression	Sgr027862
Synteny	Sgr027862
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0009073 - aromatic amino acid family biosynthetic process (biological process) GO:0046417 - chorismate metabolic process (biological process) GO:0005665 - RNA polymerase II, core complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0032549 - ribonucleoside binding (molecular function) GO:0004106 - chorismate mutase activity (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR007642 - RNA polymerase Rpb2, domain 2 IPR037039 - Chorismate mutase, AroQ class superfamily, eukaryotic IPR037034 - RNA polymerase Rpb2, domain 2 superfamily IPR037033 - DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily IPR036263 - Chorismate mutase type II superfamily IPR015712 - DNA-directed RNA polymerase, subunit 2 IPR014724 - RNA polymerase Rpb2, OB-fold IPR008238 - Chorismate mutase, AroQ class, eukaryotic type IPR007647 - RNA polymerase Rpb2, domain 5 IPR007646 - RNA polymerase Rpb2, domain 4 IPR007645 - RNA polymerase Rpb2, domain 3 IPR007644 - RNA polymerase, beta subunit, protrusion IPR007121 - RNA polymerase, beta subunit, conserved site IPR007120 - DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7037651.1 DNA-directed RNA polymerases IV and V subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]

0.0e+00

94.55

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Query:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK
        MGT SGAKDDIEMNSE ED SPG+DMDTDDD+YSE VNIHDLGE FLKDFCKKSSMAFFNEYGLISHQ+NSYNDFIKSG+Q +FDYFGEIVVQPGYDPSK
Subjt:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK

Query:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN
        KGDGEWRYASVKFGKVTLDKP+FWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTG+DQYVDKDLLSQDNRD+FIGRLPVMVN
Subjt:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN

Query:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
        SDLCWMK+ QKRDCEFD GGYFLIKGAEKIFIAQEQICLRRLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Subjt:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA

Query:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
        LGVSSDRE+VDLID+GR+DP+VLNILFASVR VDNDDKWKDFRRGKRALNFL+NE+KKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
Subjt:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY

Query:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP
        TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHY DASIITNGLSRAFSTGAWAH FKRMERISGVVATLGRANP
Subjt:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP

Query:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV
        LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKN+SITGLVSLNTLKP+VP LFRCGMEN+VDDTST LSGKH+IFLNGEWVGV
Subjt:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV

Query:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE
        CEDSLSFVTK+RR+RRRN LLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKSKGE+ TFQSLLD G+IELIGTEEEEDCRTAW IKHL E +
Subjt:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE

Query:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
        GT+KY+HCELD SFLLGLSCGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
Subjt:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN

Query:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES
        GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLD+DGFP+IGANLQSGDIVIGRCAES
Subjt:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES

Query:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
        GADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
Subjt:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK

Query:  GIASGGSLKYATPFSTPSVDTITDQLH
        GIASGGSLKYATPFSTPSVD ITDQLH
Subjt:  GIASGGSLKYATPFSTPSVDTITDQLH

XP_022138042.1 DNA-directed RNA polymerases IV and V subunit 2-like [Momordica charantia]

0.0e+00

95.33

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Query:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK
        MGTSSGAKDDIEMNSEAE +SPG+DMDTDDD+YSE VNI ++GE FLKDFCKK+SMAFFNEYGLISHQINSYNDFI+SGLQ AFDYFGEIVVQPGYDPSK
Subjt:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK

Query:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN
        KGDGEWRYASVKFGKVTLDKP+FWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNR++FIGRLPVMVN
Subjt:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN

Query:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
        SDLCWMKE+QKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Subjt:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA

Query:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
        LGVSSD+EVVDLIDYGRDDP+VLNILFASVREVDNDDKWKDFRRGK+ALN+LDNEIKKTSFPP EKIEDCLNLYLFASLKGLKQKCRFLGYMVKC+LQAY
Subjt:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY

Query:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP
        TGRRK DNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDR+VRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP
Subjt:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP

Query:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV
        LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVP LFRCGMENLVDDT TPLSG +KIFLNGEWVG+
Subjt:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV

Query:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE
        C DS+SFVTKLRR+RRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGEN TFQSLLD G+IELIGTEEEEDCRTAWGIK+LME E
Subjt:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE

Query:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
        GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTM ADCLGTPGYLSSH+GI P+PEFYN
Subjt:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN

Query:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES
        GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKA+VDNKESSEKRRKSDDAINFGKTQSKIGRVDSLD+DGFP+IGANLQSGDIVIGRCAES
Subjt:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES

Query:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
        GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
Subjt:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK

Query:  GIASGGSLKYATPFSTPSVDTITDQLH
        GIA+GGSLKYATPFSTPSVD ITDQLH
Subjt:  GIASGGSLKYATPFSTPSVDTITDQLH

XP_022940261.1 DNA-directed RNA polymerases IV and V subunit 2-like [Cucurbita moschata]

0.0e+00

94.64

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Query:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK
        MGT SGAKDDIEMNSE ED SPG+DMDTDDD+YSE VNIHDLGE FLKDFCKKSSMAFFNEYGLISHQ+NSYNDFIKSG+Q +FDYFGEIVVQPGYDPSK
Subjt:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK

Query:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN
        KGDGEWRYASVKFGKVTLDKP+FWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTG+DQYVDKDLLSQDNRD+FIGRLPVMVN
Subjt:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN

Query:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
        SDLCWMK+ QKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Subjt:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA

Query:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
        LGVSSDRE+VDLID+GR+DP+VLNILFASVR VDNDDKWKDFRRGKRALNFL+NE+KKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
Subjt:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY

Query:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP
        TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHY DASIITNGLSRAFSTGAWAH FKRMERISGVVATLGRANP
Subjt:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP

Query:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV
        LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKN+SITGLVSLNTLKP+VP LFRCGMEN+VDDTST LSGKH+IFLNGEWVGV
Subjt:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV

Query:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE
        CEDSLSFVTK+RR+RRRN LLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKSKGE+ TFQSLLD G+IELIGTEEEEDCRTAW IKHL E +
Subjt:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE

Query:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
        GT+KY+HCELD SFLLGLSCGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
Subjt:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN

Query:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES
        GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLD+DGFP+IGANLQSGDIVIGRCAES
Subjt:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES

Query:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
        GADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
Subjt:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK

Query:  GIASGGSLKYATPFSTPSVDTITDQLH
        GIASGGSLKYATPFSTPSVD ITDQLH
Subjt:  GIASGGSLKYATPFSTPSVDTITDQLH

XP_023524029.1 DNA-directed RNA polymerases IV and V subunit 2-like [Cucurbita pepo subsp. pepo]

0.0e+00

94.64

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Query:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK
        MGT SGAKDDIEMNSE ED SPG+DMDTDDD+YSE VNIHDLGE FLKDFCKKSSMAFFNEYGLISHQ+NSYNDFIKSG+Q +FDYFGEIVVQPGYDPSK
Subjt:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK

Query:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN
        KGDGEWRYASVKFGKVTLDKP+FWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTG+DQYVDKDLLSQDNRD+FIGRLPVMVN
Subjt:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN

Query:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
        SDLCWMK+ QKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Subjt:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA

Query:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
        LGVSSDRE+VDLID+GR+DP+VLNILFASVR VDNDDKWKDFRRGKRALNFL+NE+KKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
Subjt:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY

Query:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP
        TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHY DASIITNGLSRAFSTGAWAH FKRMERISGVVATLGRANP
Subjt:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP

Query:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV
        LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKN+SITGLVSLNTLKP+VP LFRCGMEN+VDDTST LSGKH+IFLNGEWVGV
Subjt:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV

Query:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE
        CEDSLSFVTK+RR+RRRN LLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKSKGE+ TFQSLLD G+IELIGTEEEEDCRTAW IKHL E +
Subjt:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE

Query:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
        GT+KY+HCELD SFLLGLSCGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
Subjt:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN

Query:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES
        GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLD+DGFP+IGANLQSGDIVIGRCAES
Subjt:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES

Query:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
        GADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
Subjt:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK

Query:  GIASGGSLKYATPFSTPSVDTITDQLH
        GIASGGSLKYATPFSTPSVD ITDQLH
Subjt:  GIASGGSLKYATPFSTPSVDTITDQLH

XP_038897771.1 DNA-directed RNA polymerases IV and V subunit 2-like [Benincasa hispida]

0.0e+00

94.84

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Query:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDE-YSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPS
        MGT SG KDDIEMNSE ED SPG+DMDTDDD+ YSE VNI DLGEAFLKDFCKKSSMAFFN+YGLISHQINSYNDFIKSG+Q AFDYFGEI+VQPGYDPS
Subjt:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDE-YSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPS

Query:  KKGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMV
        KKGDGEWRYASVKFGKVTLDKP+FWGGAASGKEYNMLPRHARLQNMTYSSRMK+NI++EVYTQRLV SDKFKTGKD+YVDK+ + +DNRDVFIGRLPVMV
Subjt:  KKGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMV

Query:  NSDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFF
        NSDLCWMKE+QKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTE+PVWILFF
Subjt:  NSDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFF

Query:  ALGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQA
        ALGVSSD+E+VDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNE++KTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQA
Subjt:  ALGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQA

Query:  YTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRAN
        YTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAH FKRMERISGVVATLGRAN
Subjt:  YTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRAN

Query:  PLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVG
        PLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCF+STPDGENCGLIKN+S+TGLVSLNTLKPIVP LFRCGMENLVDDTST LSGK+KIFL+GEWVG
Subjt:  PLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVG

Query:  VCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEK
        VCEDSLSFVTK+RR+RRRN LLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKSKGEN TFQSLLD G+IELIGTEEEEDCRTAW IKHLME 
Subjt:  VCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEK

Query:  EGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFY
        EGTTKYSHCELDMSFLLGLSCGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFY
Subjt:  EGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFY

Query:  NGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAE
        NGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFP+IGANLQSGDIVIGRCAE
Subjt:  NGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAE

Query:  SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALG
        SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALG
Subjt:  SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALG

Query:  KGIASGGSLKYATPFSTPSVDTITDQLH
        KGIASGGSLKYATPFSTPSVD IT+QLH
Subjt:  KGIASGGSLKYATPFSTPSVDTITDQLH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BUT1 DNA-directed RNA polymerase subunit beta

0.0e+00

92.05

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Query:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDE--YSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDP
        MGT SG KDDIEMNSE ED SPG D+DTDDD+  YSE VNI+DLGEAFLKDFCKKSSMAFFN+YGLISHQINSYNDFIK+G+Q AFD+FG+I+VQPGYDP
Subjt:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDE--YSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDP

Query:  SKKGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLL--SQDNRDVFIGRLP
        SKKGDGEWRYASVKFGKVTLDKP+FWGGAASGKEYNMLPRHARLQNMTYSSRMK+NI++E+YTQ+LV SDKFKTGKDQYVDK+ +  + DNRDVFIGRLP
Subjt:  SKKGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLL--SQDNRDVFIGRLP

Query:  VMVNSDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWI
        VMVNSDLCWMK++QKRDCEFD GGYFLIKGAEKIFIAQEQICLRRLWISN+QGWTVAYRSEVKRNRLIIRLVENSKSE+LKSKEKVLNVYFLSTE+PVWI
Subjt:  VMVNSDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWI

Query:  LFFALGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCL
        LFFALGVSSD+E+VDLIDYGRDDP+VLNILFASVREVDNDDKWKDFRRGKRAL FLDNEI+KTSFPPAEKIEDCLNLYLFASLKGLKQKC FLGYMVKCL
Subjt:  LFFALGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCL

Query:  LQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLG
        LQAYTGRRKCDNRDDFRNKRFELA ELLERE+KVHIAHARRRMEKALQRDLYGDR VRPIEHYLDASIITNGLSRAFSTGAWAH FKRMERISGVVATLG
Subjt:  LQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLG

Query:  RANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGE
        RANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKN+S TGLVSLNT KPI+P LF CGMENL D+TST L GK++IFL+GE
Subjt:  RANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGE

Query:  WVGVCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHL
        WVGVCEDSLSFVTK+RR+RRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKSKGEN TFQSLLD G+IEL+GTEEEEDCR AW IKHL
Subjt:  WVGVCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHL

Query:  MEKEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKP
        ME EGTTKYSHCELDMSFLLGLSCGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKP
Subjt:  MEKEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKP

Query:  EFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGR
        EFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDD INFGKTQSKIGRVDSLD+DGFP+IGANLQSGDIVIGR
Subjt:  EFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGR

Query:  CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA
        CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA
Subjt:  CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA

Query:  ALGKGIASGGSLKYATPFSTPSVDTITDQLH
        ALGKGIA+GGSLKYATPFSTPSVD ITDQLH
Subjt:  ALGKGIASGGSLKYATPFSTPSVDTITDQLH

A0A5D3D8Y5 DNA-directed RNA polymerase subunit beta

0.0e+00

92.05

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Query:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDE--YSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDP
        MGT SG KDDIEMNSE ED SPG D+DTDDD+  YSE VNI+DLGEAFLKDFCKKSSMAFFN+YGLISHQINSYNDFIK+G+Q AFD+FG+I+VQPGYDP
Subjt:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDE--YSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDP

Query:  SKKGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLL--SQDNRDVFIGRLP
        SKKGDGEWRYASVKFGKVTLDKP+FWGGAASGKEYNMLPRHARLQNMTYSSRMK+NI++E+YTQ+LV SDKFKTGKDQYVDK+ +  + DNRDVFIGRLP
Subjt:  SKKGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLL--SQDNRDVFIGRLP

Query:  VMVNSDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWI
        VMVNSDLCWMK++QKRDCEFD GGYFLIKGAEKIFIAQEQICLRRLWISN+QGWTVAYRSEVKRNRLIIRLVENSKSE+LKSKEKVLNVYFLSTE+PVWI
Subjt:  VMVNSDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWI

Query:  LFFALGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCL
        LFFALGVSSD+E+VDLIDYGRDDP+VLNILFASVREVDNDDKWKDFRRGKRAL FLDNEI+KTSFPPAEKIEDCLNLYLFASLKGLKQKC FLGYMVKCL
Subjt:  LFFALGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCL

Query:  LQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLG
        LQAYTGRRKCDNRDDFRNKRFELA ELLERE+KVHIAHARRRMEKALQRDLYGDR VRPIEHYLDASIITNGLSRAFSTGAWAH FKRMERISGVVATLG
Subjt:  LQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLG

Query:  RANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGE
        RANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKN+S TGLVSLNT KPI+P LF CGMENL D+TST L GK++IFL+GE
Subjt:  RANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGE

Query:  WVGVCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHL
        WVGVCEDSLSFVTK+RR+RRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKSKGEN TFQSLLD G+IEL+GTEEEEDCR AW IKHL
Subjt:  WVGVCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHL

Query:  MEKEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKP
        ME EGTTKYSHCELDMSFLLGLSCGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKP
Subjt:  MEKEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKP

Query:  EFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGR
        EFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDD INFGKTQSKIGRVDSLD+DGFP+IGANLQSGDIVIGR
Subjt:  EFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGR

Query:  CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA
        CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA
Subjt:  CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA

Query:  ALGKGIASGGSLKYATPFSTPSVDTITDQLH
        ALGKGIA+GGSLKYATPFSTPSVD ITDQLH
Subjt:  ALGKGIASGGSLKYATPFSTPSVDTITDQLH

A0A6J1C950 DNA-directed RNA polymerase subunit beta

0.0e+00

95.33

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Query:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK
        MGTSSGAKDDIEMNSEAE +SPG+DMDTDDD+YSE VNI ++GE FLKDFCKK+SMAFFNEYGLISHQINSYNDFI+SGLQ AFDYFGEIVVQPGYDPSK
Subjt:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK

Query:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN
        KGDGEWRYASVKFGKVTLDKP+FWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNR++FIGRLPVMVN
Subjt:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN

Query:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
        SDLCWMKE+QKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Subjt:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA

Query:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
        LGVSSD+EVVDLIDYGRDDP+VLNILFASVREVDNDDKWKDFRRGK+ALN+LDNEIKKTSFPP EKIEDCLNLYLFASLKGLKQKCRFLGYMVKC+LQAY
Subjt:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY

Query:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP
        TGRRK DNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDR+VRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP
Subjt:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP

Query:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV
        LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVP LFRCGMENLVDDT TPLSG +KIFLNGEWVG+
Subjt:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV

Query:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE
        C DS+SFVTKLRR+RRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGEN TFQSLLD G+IELIGTEEEEDCRTAWGIK+LME E
Subjt:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE

Query:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
        GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTM ADCLGTPGYLSSH+GI P+PEFYN
Subjt:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN

Query:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES
        GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKA+VDNKESSEKRRKSDDAINFGKTQSKIGRVDSLD+DGFP+IGANLQSGDIVIGRCAES
Subjt:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES

Query:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
        GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
Subjt:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK

Query:  GIASGGSLKYATPFSTPSVDTITDQLH
        GIA+GGSLKYATPFSTPSVD ITDQLH
Subjt:  GIASGGSLKYATPFSTPSVDTITDQLH

A0A6J1FHZ2 DNA-directed RNA polymerase subunit beta

0.0e+00

94.64

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Query:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK
        MGT SGAKDDIEMNSE ED SPG+DMDTDDD+YSE VNIHDLGE FLKDFCKKSSMAFFNEYGLISHQ+NSYNDFIKSG+Q +FDYFGEIVVQPGYDPSK
Subjt:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK

Query:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN
        KGDGEWRYASVKFGKVTLDKP+FWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTG+DQYVDKDLLSQDNRD+FIGRLPVMVN
Subjt:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN

Query:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
        SDLCWMK+ QKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Subjt:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA

Query:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
        LGVSSDRE+VDLID+GR+DP+VLNILFASVR VDNDDKWKDFRRGKRALNFL+NE+KKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
Subjt:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY

Query:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP
        TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHY DASIITNGLSRAFSTGAWAH FKRMERISGVVATLGRANP
Subjt:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP

Query:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV
        LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKN+SITGLVSLNTLKP+VP LFRCGMEN+VDDTST LSGKH+IFLNGEWVGV
Subjt:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV

Query:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE
        CEDSLSFVTK+RR+RRRN LLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKSKGE+ TFQSLLD G+IELIGTEEEEDCRTAW IKHL E +
Subjt:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE

Query:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
        GT+KY+HCELD SFLLGLSCGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
Subjt:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN

Query:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES
        GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLD+DGFP+IGANLQSGDIVIGRCAES
Subjt:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES

Query:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
        GADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
Subjt:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK

Query:  GIASGGSLKYATPFSTPSVDTITDQLH
        GIASGGSLKYATPFSTPSVD ITDQLH
Subjt:  GIASGGSLKYATPFSTPSVDTITDQLH

A0A6J1IXN3 DNA-directed RNA polymerase subunit beta

0.0e+00

94.45

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Query:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK
        MGT SGAKDDIEMNSE ED SPG+DMDTDDD+YSE VNIHDLGE FLKDFCKKSSMAFF+EYGLISHQ+NSYNDFIKSG+Q +FDYFGEIVVQPGYDPSK
Subjt:  MGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSK

Query:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN
        KGDGEWRYASVKFGKVTLDKP+FWGGAASGKEYN+LPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTG+DQYVDKDLLSQDNRD+FIGRLPVMVN
Subjt:  KGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVN

Query:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
        SDLCWMK+ QKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Subjt:  SDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA

Query:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
        LGVSSDRE+VDLID+GR+DP+VLNILFASVR VDNDDKWKDFRRGKRALNFL+NE+KKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY
Subjt:  LGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAY

Query:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP
        TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHY DASIITNGLSRAFSTGAWAH FKRMERISGVVATLGRANP
Subjt:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP

Query:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV
        LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKN+SITGLVSLNTLKP+VP LFRCGMEN+VDDTST LSGKHKIFLNGEWVGV
Subjt:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGV

Query:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE
        CEDSLSFVTK+R +RRRN LLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKSKGE+ TFQSLLD G+IELIGTEEEEDCRTAW IKHL E +
Subjt:  CEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKE

Query:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
        GT+KY+HCELD SFLLGLSCGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
Subjt:  GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN

Query:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES
        GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLD+DGFP+IGANLQSGDIVIGRCAES
Subjt:  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAES

Query:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
        GADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
Subjt:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK

Query:  GIASGGSLKYATPFSTPSVDTITDQLH
        GIASGGSLKYATPFSTPSVD ITDQLH
Subjt:  GIASGGSLKYATPFSTPSVDTITDQLH

SwissProt top hits

e value

%identity

Alignment

P38420 DNA-directed RNA polymerase II subunit 2

1.9e-147

33.11

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Query:  AFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMN
        A+F E GL+  Q++S+++FI++ +Q   D   +I ++P   ++P  + D       + FG++ L KP      + G+   + P+ ARL+N+TYS+ + ++
Subjt:  AFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMN

Query:  INVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI-SNI
        +     T+R++     K G D   ++   +QD   VFIG++P+M+ S  C + +  ++D      C +D GGYF+I G+EK+ IAQE++    +++    
Subjt:  INVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI-SNI

Query:  QGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREVVDLIDYGRDDPSVLNILFASVRE---VD
        Q    AY  EV+     +NR    + +R++  + ++   S + +   + ++ TEIP+ I+F ALG  +D+++++ I Y   D  ++ +L  S+ E   + 
Subjt:  QGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREVVDLIDYGRDDPSVLNILFASVRE---VD

Query:  NDDKWKDF--RRG-------KRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLE
        N     D+  +RG       ++ + +  + ++K   P     E C             +K  + GY++  LL    GRR  D+RD + NKR +LAG LL 
Subjt:  NDDKWKDF--RRG-------KRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLE

Query:  REIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARY
           ++      R +   +Q+ +   ++V  ++  + A  IT+GL  + +TG W        R +GV   L R     T++ LRR    +   GK+   R 
Subjt:  REIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARY

Query:  PHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLK-PIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLRRRRRRNWLLHQV
         H S WG +C   TP+G+ CGL+KN+++   +++ +   PI+  L   G EN  + + + +    KIF+NG WVGV  D    V  LRR RRR  +  +V
Subjt:  PHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLK-PIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLRRRRRRNWLLHQV

Query:  EVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSK----------GENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLM------EKEGTTKYSHC
         V RD +LKE+RI++D GR  RPL +V+N   + K +           E   +  L+  G IE I TEEEE    +  I  L+      E+  T  Y+HC
Subjt:  EVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSK----------GENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLM------EKEGTTKYSHC

Query:  ELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAV
        E+  S +LG+   ++PF +H+ + R  YQS     QA+G   TN  FR+DTL++ L+YPQ+PL  T   + L        H   LP      G NAIVA+
Subjt:  ELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAV

Query:  NVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQS-KIGRVDSLDEDGFPFIGANLQSGDIVIGRCAE--------
        + + GYNQEDS++MN++S++RG FRS   RSY+ E   K+     ++     + G T   + G  D LD+DG    G  +   D++IG+           
Subjt:  NVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQS-KIGRVDSLDEDGFPFIGANLQSGDIVIGRCAE--------

Query:  -----SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL
             +  DHSI L+H+E GMV +V+L++N DG  +  V +R VR P +GDKFSS HGQKG +G   +QE+ P+TI+G+ PDI++NPHA PSR T GQL+
Subjt:  -----SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL

Query:  EAALGKGIASGGSLKYATPFSTPSVDTITDQLH
        E  +GK  A  G    ATPF+  +VD I+  LH
Subjt:  EAALGKGIASGGSLKYATPFSTPSVDTITDQLH

Q10578 DNA-directed RNA polymerase II subunit RPB2

2.7e-138

31.92

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Query:  EDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVT
        ED      MD D  + S+ ++     EA     C     A+F+E GL+  Q++S+++F++  +Q   +    + +Q                S+KF ++ 
Subjt:  EDFSPGSDMDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVT

Query:  LDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRD----
        L KP  W     G    M+P  ARL+N+TY+S + ++I     T+ + R D   +  ++  DK         VF+G++PVM+ S  C +     RD    
Subjt:  LDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRD----

Query:  --CEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVK---------RNRLIIRLVENSKSEELKSK--EKVLNVY-FLSTEIPVWILFF
          C  D GGYF+I G+EK+ IAQE++    +++ +++    A+++E +          + + + ++        K+   ++++ +  ++  EIP+ I+F 
Subjt:  --CEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVK---------RNRLIIRLVENSKSEELKSK--EKVLNVY-FLSTEIPVWILFF

Query:  ALGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIE---DCLNLYLFASLKGLKQKCR-----FLGY
        ALG  SDR+++  I Y  +DP ++ ++  S+      D+    +    ALNF+     K      ++I+   + L   L   + G+ + C      F+GY
Subjt:  ALGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIE---DCLNLYLFASLKGLKQKCR-----FLGY

Query:  MVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGV
        MV  LL A  GRR+ D+RD   NKR +LAG LL    +    +  + M    Q+ +  + D   ++  +  S IT GL+ + +TG W    K  +  +GV
Subjt:  MVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGV

Query:  VATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTL-KPIVPILFRCGMENLVDDTSTPLSGKHK
           L R     T++ LRR    +   GK+   R  H + WG VC   TP+G+  GL+KN+++   +S+ +L +PI+  L    MENL + + + ++   K
Subjt:  VATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTL-KPIVPILFRCGMENLVDDTSTPLSGKHK

Query:  IFLNGEWVGVCEDSLSFVTKLRR-RRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVEN----LNK--IDKSK-----GENCTFQSLLDMGVIEL
        IF+NG WVG+  +    +T L++ RR+ + ++ +V + RD + +E+RI++DAGR+ RPLL+VEN    L K  ID+ K         T+  L+  GV+EL
Subjt:  IFLNGEWVGVCEDSLSFVTKLRR-RRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVEN----LNK--IDKSK-----GENCTFQSLLDMGVIEL

Query:  IGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTAD
        I + EEE    A   + L        ++HCE+  + +LG+   ++PF +H+ + R  YQS     QA+G  TTN + R+DTL+H L+YPQ+PL  T + +
Subjt:  IGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTAD

Query:  CLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYK---AEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSL
              YL  +       E   G NAIVA+  + GYNQEDS++MN ++++RG+FRS   RSY+   A +DN       + + +  + G   S     D L
Subjt:  CLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYK---AEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSL

Query:  DEDGFPFIGANLQSGDIVIGRCA----------ESG-----ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL
        DEDG    G  +   D++IG+             SG      D S  L+ +E G+V +V+LS N DG  +  + +R VR P +GDKF+S HGQKG +G +
Subjt:  DEDGFPFIGANLQSGDIVIGRCA----------ESG-----ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL

Query:  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVDTITDQ
          QE+ PFT +G+ PDI+INPHA PSR T G L+E   GK  A+ G +  ATPF+    DT+  Q
Subjt:  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVDTITDQ

Q42877 DNA-directed RNA polymerase II subunit RPB2

1.1e-147

32.52

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Query:  DDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPRFWGGA
        +DEY    N+ D  E   ++       A+F E GL+  Q++S+++FI++ +Q   D   +I ++P   ++P  + D       + FG++ L KP      
Subjt:  DDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPRFWGGA

Query:  ASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRD------CEFDHGGY
        + G+   + P+ ARL+N+TYS+ + +++     T+R++     K G D   ++   +QD   VFIG++P+M+ S  C + +  ++D      C  D GGY
Subjt:  ASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRD------CEFDHGGY

Query:  FLIKGAEKIFIAQEQICLRRLWI-SNIQGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREVV
        F+I G+EK+ IAQE++    +++    Q    A+ +EV+     +NR    + +R++  + ++   S + +   + ++ TEIP+ I+F ALG  +D++++
Subjt:  FLIKGAEKIFIAQEQICLRRLWI-SNIQGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREVV

Query:  DLIDYGRDDPSVLNILFASVRE---VDNDDKWKDF--RRG-------KRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQ
        + I Y  +D  ++ +L  S+ E   + N     D+  +RG       ++ + +    ++K   P     E C             +K  + GY++  LL 
Subjt:  DLIDYGRDDPSVLNILFASVRE---VDNDDKWKDF--RRG-------KRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQ

Query:  AYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRA
           GRR  D+RD + NKR +LAG LL    ++      R +   +Q+ +   +DV  ++  + A  IT+GL  + +TG W        R +GV   L R 
Subjt:  AYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRA

Query:  NPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLK-PIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEW
            T++ LRR    +   GK+   R  H S WG +C   TP+G+ CGL+KN+++   +++ +   PI+  L   G EN  + +   +    KIF+NG W
Subjt:  NPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLK-PIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEW

Query:  VGVCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKG----------ENCTFQSLLDMGVIELIGTEEEEDC
        VG+  D    V  LRR RRR  +  +V V RD +LKE+RI++D GR  RPL +VE    + K K           +   +  L+  G IE I TEEEE  
Subjt:  VGVCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKG----------ENCTFQSLLDMGVIELIGTEEEEDC

Query:  RTAWGIKHLMEKE------GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLG
          +  I  L++         +  Y+HCE+  S +LG+   ++PF +H+ + R  YQS     QA+G   TN  FR+DTL++ L+YPQ+PL  T   + L 
Subjt:  RTAWGIKHLMEKE------GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLG

Query:  TPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKES--SEKRRKSDDAINFGKTQSKIGRVDSLDEDG
               H   LP      G NAIVA++ + GYNQEDS++MN++S++RG FRS   RSY+ E     +   E   + D A   G    + G  D LD+DG
Subjt:  TPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKES--SEKRRKSDDAINFGKTQSKIGRVDSLDEDG

Query:  FPFIGANLQSGDIVIGRCAE-------------SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF
            G  +   D++IG+                +  DHS  L+H+E GMV +V+L++N DG  +  V +R VR P +GDKFSS HGQKG +G   +QE+ 
Subjt:  FPFIGANLQSGDIVIGRCAE-------------SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENF

Query:  PFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVDTITDQLH
        P+T++GI PDI++NPHA PSR T GQL+E  +GK  A  G    ATPF+  +VD I+  LH
Subjt:  PFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVDTITDQLH

Q9LK40 DNA-directed RNA polymerases IV and V subunit 2

0.0e+00

66.08

Show/hide

Query:  PGSDMDTDDDEYSEV----VNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVT
        P  D+D  D E  E     +N+ +LGE FL+ FCKK++ +FF++YGLISHQ+NSYN FI+ GLQN F  FGE++V+P +D  KK D +WRYA+VKFG+VT
Subjt:  PGSDMDTDDDEYSEV----VNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVT

Query:  LDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQ-----QKR
        ++KP F+   +  KE   LP HARLQNMTYS+R+K+N+ VEV+   +V+SDKFKTG+D YV+K +L    +D+ IG +PVMV S LC   E+     +K 
Subjt:  LDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQ-----QKR

Query:  DCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREVVDL
        DC FD GGYF+IKGAEK+FIAQEQ+C +RLWISN   WTV++RSE KRNR I+RL EN K+E+ K +EKVL VYFLSTEIPVW+LFFALGVSSD+E +DL
Subjt:  DCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREVVDL

Query:  IDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDF
        I +  DD S+ N L AS+     D   + FR G  AL +++ +IK T FPPAE +++CL+LYLF  L+ LK+K RFLGYMVKCLL +Y G+RKC+NRD F
Subjt:  IDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDF

Query:  RNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQ
        RNKR ELAGELLEREI+VH+AHARR+M +A+Q+ L GD D++PIEHYLDAS+ITNGLSRAFSTGAW+HPF++MER+SGVVA LGRANPLQT+ +LRRTRQ
Subjt:  RNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQ

Query:  QVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLR
        QV YTGKVGDARYPHPSHWGRVCFLSTPDGENCGL+KNMS+ GLVS  +L+ +V  LF CGME L+DDT TPL GKHK+ LNG+WVG+C DS SFV +L+
Subjt:  QVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLR

Query:  RRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDM
         RRR++ L  ++E+KRD+   EVRIF+DAGR+LRPLLVVENL K+ + K     F  LLD G++ELIG EEEEDC TAWGIK L+++     Y+HCELD+
Subjt:  RRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDM

Query:  SFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHL
        SFLLG+SC +VPFANHDH RRVLYQSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++C             L K   +NGQNAIVAVNVHL
Subjt:  SFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHL

Query:  GYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTE
        GYNQEDS+VMN+ASLERGMFRSE IRSYKAEVD K+ SEKR+K D+ + FGKT SKIG+VDSL++DGFPFIGAN+ +GDIVIGRC ESGADHSIKLKHTE
Subjt:  GYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTE

Query:  KGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGS
        +G+VQKVVLSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAAL KGIA      G S
Subjt:  KGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGS

Query:  LKY------ATPFSTPSVDTITDQLH
          Y      ATPFSTP V  IT+QLH
Subjt:  LKY------ATPFSTPSVDTITDQLH

Q9LV32 DNA-directed RNA polymerase D subunit 2b

0.0e+00

63.79

Show/hide

Query:  MDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKPRFWG
        MD D+ E +  +NI +LGE+FL+ FCKK++ +FF E+GLISHQ+NSYN FI+ GLQN F+ FG+I+V+P +D  KK DG+WRYA+V F K+         
Subjt:  MDTDDDEYSEVVNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKPRFWG

Query:  GAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRDCE-----FDHGG
                                              +++ DKFKTG+D+YV+K++L    +D+ IG +PVMV S LC   E+ K +C+     FD GG
Subjt:  GAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRDCE-----FDHGG

Query:  YFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREVVDLIDYGRDDP
        YF+IKGAEK+FIAQEQ+C +RLWISN   WTV++RSE KRNR I+RL EN K+E+ K  EKVL VYFLSTEIPVW+LFFALGVSSD+E +DLI +  DD 
Subjt:  YFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREVVDLIDYGRDDP

Query:  SVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELA
        S+ N L AS+ E   D   + FR G  AL +++++IK T FPPAE ++DCL LYLF  L+GLK+K RFLGYMVKCLL AY G+RKC+NRD FRNKR ELA
Subjt:  SVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELA

Query:  GELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKV
        GELLEREI+VH+AHARR+M +A+Q+ L GD D++PIEHYLDAS+ITNGL+RAFSTGAW+HPF++MER+SGVVA LGRANPLQT+ +LRRTRQQV YTGKV
Subjt:  GELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKV

Query:  GDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLRRRRRRNWL
        GDAR+PHPSHWGRVCFLSTPDGENCGL+KNMS+ GLVS   L+ +V +LF CGME L++DTSTPL GKHK+ LNG+WVG+C DS SFV +L+ RRR++ L
Subjt:  GDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLRRRRRRNWL

Query:  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDMSFLLGLSC
          ++E+KRD+   EVRIF+DAGR+LRPLLVVENL+K+ + K     F+ LLD G++ELIG EEEEDC TAWGIK L+++     Y+HCELD+SFLLG+SC
Subjt:  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDMSFLLGLSC

Query:  GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSL
         +VPFANHDH +RVLYQSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++C             L K   +NGQNAIVAVNVHLGYNQEDS+
Subjt:  GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSL

Query:  VMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVV
        VMN+ASLERGMFRSE IRSYKAEVD K+ SEKR+K D+ + FGKT SKIG+VDSL++DGFPFIGAN+ +GDIVIGRC ESGADHSIKLKHTE+G+VQKVV
Subjt:  VMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVV

Query:  LSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA------SGGSLKY----
        LSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAAL KGIA       G S  Y    
Subjt:  LSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA------SGGSLKY----

Query:  --ATPFSTPSVDTITDQLH
          ATPFSTP V  IT+QLH
Subjt:  --ATPFSTPSVDTITDQLH

Arabidopsis top hits

e value

%identity

Alignment

AT3G18090.1 nuclear RNA polymerase D2B

0.0e+00

67.7

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Query:  RLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRDCE-----FDHGGYFLIKGAEKIFIAQE
        RLQNMTYS+R+K+N  VEV+ + +++ DKFKTG+D+YV+K++L    +D+ IG +PVMV S LC   E+ K +C+     FD GGYF+IKGAEK+FIAQE
Subjt:  RLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRDCE-----FDHGGYFLIKGAEKIFIAQE

Query:  QICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREVVDLIDYGRDDPSVLNILFASVREVDN
        Q+C +RLWISN   WTV++RSE KRNR I+RL EN K+E+ K  EKVL VYFLSTEIPVW+LFFALGVSSD+E +DLI +  DD S+ N L AS+ E   
Subjt:  QICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREVVDLIDYGRDDPSVLNILFASVREVDN

Query:  DDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHA
        D   + FR G  AL +++++IK T FPPAE ++DCL LYLF  L+GLK+K RFLGYMVKCLL AY G+RKC+NRD FRNKR ELAGELLEREI+VH+AHA
Subjt:  DDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHA

Query:  RRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC
        RR+M +A+Q+ L GD D++PIEHYLDAS+ITNGL+RAFSTGAW+HPF++MER+SGVVA LGRANPLQT+ +LRRTRQQV YTGKVGDAR+PHPSHWGRVC
Subjt:  RRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC

Query:  FLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEV
        FLSTPDGENCGL+KNMS+ GLVS   L+ +V +LF CGME L++DTSTPL GKHK+ LNG+WVG+C DS SFV +L+ RRR++ L  ++E+KRD+   EV
Subjt:  FLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEV

Query:  RIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVL
        RIF+DAGR+LRPLLVVENL+K+ + K     F+ LLD G++ELIG EEEEDC TAWGIK L+++     Y+HCELD+SFLLG+SC +VPFANHDH +RVL
Subjt:  RIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVL

Query:  YQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSE
        YQSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++C             L K   +NGQNAIVAVNVHLGYNQEDS+VMN+ASLERGMFRSE
Subjt:  YQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSE

Query:  HIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCL
         IRSYKAEVD K+ SEKR+K D+ + FGKT SKIG+VDSL++DGFPFIGAN+ +GDIVIGRC ESGADHSIKLKHTE+G+VQKVVLSSND+GKN+A V L
Subjt:  HIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCL

Query:  RQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA------SGGSLKY------ATPFSTPSVDTIT
        RQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAAL KGIA       G S  Y      ATPFSTP V  IT
Subjt:  RQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA------SGGSLKY------ATPFSTPSVDTIT

Query:  DQLH
        +QLH
Subjt:  DQLH

AT3G23780.1 nuclear RNA polymerase D2A

0.0e+00

66.08

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Query:  PGSDMDTDDDEYSEV----VNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVT
        P  D+D  D E  E     +N+ +LGE FL+ FCKK++ +FF++YGLISHQ+NSYN FI+ GLQN F  FGE++V+P +D  KK D +WRYA+VKFG+VT
Subjt:  PGSDMDTDDDEYSEV----VNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVT

Query:  LDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQ-----QKR
        ++KP F+   +  KE   LP HARLQNMTYS+R+K+N+ VEV+   +V+SDKFKTG+D YV+K +L    +D+ IG +PVMV S LC   E+     +K 
Subjt:  LDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQ-----QKR

Query:  DCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREVVDL
        DC FD GGYF+IKGAEK+FIAQEQ+C +RLWISN   WTV++RSE KRNR I+RL EN K+E+ K +EKVL VYFLSTEIPVW+LFFALGVSSD+E +DL
Subjt:  DCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREVVDL

Query:  IDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDF
        I +  DD S+ N L AS+     D   + FR G  AL +++ +IK T FPPAE +++CL+LYLF  L+ LK+K RFLGYMVKCLL +Y G+RKC+NRD F
Subjt:  IDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDF

Query:  RNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQ
        RNKR ELAGELLEREI+VH+AHARR+M +A+Q+ L GD D++PIEHYLDAS+ITNGLSRAFSTGAW+HPF++MER+SGVVA LGRANPLQT+ +LRRTRQ
Subjt:  RNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQ

Query:  QVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLR
        QV YTGKVGDARYPHPSHWGRVCFLSTPDGENCGL+KNMS+ GLVS  +L+ +V  LF CGME L+DDT TPL GKHK+ LNG+WVG+C DS SFV +L+
Subjt:  QVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLR

Query:  RRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDM
         RRR++ L  ++E+KRD+   EVRIF+DAGR+LRPLLVVENL K+ + K     F  LLD G++ELIG EEEEDC TAWGIK L+++     Y+HCELD+
Subjt:  RRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDM

Query:  SFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHL
        SFLLG+SC +VPFANHDH RRVLYQSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++C             L K   +NGQNAIVAVNVHL
Subjt:  SFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHL

Query:  GYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTE
        GYNQEDS+VMN+ASLERGMFRSE IRSYKAEVD K+ SEKR+K D+ + FGKT SKIG+VDSL++DGFPFIGAN+ +GDIVIGRC ESGADHSIKLKHTE
Subjt:  GYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTE

Query:  KGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGS
        +G+VQKVVLSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAAL KGIA      G S
Subjt:  KGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGS

Query:  LKY------ATPFSTPSVDTITDQLH
          Y      ATPFSTP V  IT+QLH
Subjt:  LKY------ATPFSTPSVDTITDQLH

AT3G23780.2 nuclear RNA polymerase D2A

0.0e+00

66.08

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Query:  PGSDMDTDDDEYSEV----VNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVT
        P  D+D  D E  E     +N+ +LGE FL+ FCKK++ +FF++YGLISHQ+NSYN FI+ GLQN F  FGE++V+P +D  KK D +WRYA+VKFG+VT
Subjt:  PGSDMDTDDDEYSEV----VNIHDLGEAFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVT

Query:  LDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQ-----QKR
        ++KP F+   +  KE   LP HARLQNMTYS+R+K+N+ VEV+   +V+SDKFKTG+D YV+K +L    +D+ IG +PVMV S LC   E+     +K 
Subjt:  LDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQ-----QKR

Query:  DCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREVVDL
        DC FD GGYF+IKGAEK+FIAQEQ+C +RLWISN   WTV++RSE KRNR I+RL EN K+E+ K +EKVL VYFLSTEIPVW+LFFALGVSSD+E +DL
Subjt:  DCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREVVDL

Query:  IDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDF
        I +  DD S+ N L AS+     D   + FR G  AL +++ +IK T FPPAE +++CL+LYLF  L+ LK+K RFLGYMVKCLL +Y G+RKC+NRD F
Subjt:  IDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDF

Query:  RNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQ
        RNKR ELAGELLEREI+VH+AHARR+M +A+Q+ L GD D++PIEHYLDAS+ITNGLSRAFSTGAW+HPF++MER+SGVVA LGRANPLQT+ +LRRTRQ
Subjt:  RNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQ

Query:  QVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLR
        QV YTGKVGDARYPHPSHWGRVCFLSTPDGENCGL+KNMS+ GLVS  +L+ +V  LF CGME L+DDT TPL GKHK+ LNG+WVG+C DS SFV +L+
Subjt:  QVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLR

Query:  RRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDM
         RRR++ L  ++E+KRD+   EVRIF+DAGR+LRPLLVVENL K+ + K     F  LLD G++ELIG EEEEDC TAWGIK L+++     Y+HCELD+
Subjt:  RRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKEGTTKYSHCELDM

Query:  SFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHL
        SFLLG+SC +VPFANHDH RRVLYQSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++C             L K   +NGQNAIVAVNVHL
Subjt:  SFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHL

Query:  GYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTE
        GYNQEDS+VMN+ASLERGMFRSE IRSYKAEVD K+ SEKR+K D+ + FGKT SKIG+VDSL++DGFPFIGAN+ +GDIVIGRC ESGADHSIKLKHTE
Subjt:  GYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTE

Query:  KGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGS
        +G+VQKVVLSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAAL KGIA      G S
Subjt:  KGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGS

Query:  LKY------ATPFSTPSVDTITDQLH
          Y      ATPFSTP V  IT+QLH
Subjt:  LKY------ATPFSTPSVDTITDQLH

AT4G21710.1 DNA-directed RNA polymerase family protein

1.3e-148

33.11

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Query:  AFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMN
        A+F E GL+  Q++S+++FI++ +Q   D   +I ++P   ++P  + D       + FG++ L KP      + G+   + P+ ARL+N+TYS+ + ++
Subjt:  AFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMN

Query:  INVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI-SNI
        +     T+R++     K G D   ++   +QD   VFIG++P+M+ S  C + +  ++D      C +D GGYF+I G+EK+ IAQE++    +++    
Subjt:  INVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI-SNI

Query:  QGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREVVDLIDYGRDDPSVLNILFASVRE---VD
        Q    AY  EV+     +NR    + +R++  + ++   S + +   + ++ TEIP+ I+F ALG  +D+++++ I Y   D  ++ +L  S+ E   + 
Subjt:  QGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREVVDLIDYGRDDPSVLNILFASVRE---VD

Query:  NDDKWKDF--RRG-------KRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLE
        N     D+  +RG       ++ + +  + ++K   P     E C             +K  + GY++  LL    GRR  D+RD + NKR +LAG LL 
Subjt:  NDDKWKDF--RRG-------KRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLE

Query:  REIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARY
           ++      R +   +Q+ +   ++V  ++  + A  IT+GL  + +TG W        R +GV   L R     T++ LRR    +   GK+   R 
Subjt:  REIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARY

Query:  PHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLK-PIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLRRRRRRNWLLHQV
         H S WG +C   TP+G+ CGL+KN+++   +++ +   PI+  L   G EN  + + + +    KIF+NG WVGV  D    V  LRR RRR  +  +V
Subjt:  PHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLK-PIVPILFRCGMENLVDDTSTPLSGKHKIFLNGEWVGVCEDSLSFVTKLRRRRRRNWLLHQV

Query:  EVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSK----------GENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLM------EKEGTTKYSHC
         V RD +LKE+RI++D GR  RPL +V+N   + K +           E   +  L+  G IE I TEEEE    +  I  L+      E+  T  Y+HC
Subjt:  EVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSK----------GENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLM------EKEGTTKYSHC

Query:  ELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAV
        E+  S +LG+   ++PF +H+ + R  YQS     QA+G   TN  FR+DTL++ L+YPQ+PL  T   + L        H   LP      G NAIVA+
Subjt:  ELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAV

Query:  NVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQS-KIGRVDSLDEDGFPFIGANLQSGDIVIGRCAE--------
        + + GYNQEDS++MN++S++RG FRS   RSY+ E   K+     ++     + G T   + G  D LD+DG    G  +   D++IG+           
Subjt:  NVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQS-KIGRVDSLDEDGFPFIGANLQSGDIVIGRCAE--------

Query:  -----SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL
             +  DHSI L+H+E GMV +V+L++N DG  +  V +R VR P +GDKFSS HGQKG +G   +QE+ P+TI+G+ PDI++NPHA PSR T GQL+
Subjt:  -----SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL

Query:  EAALGKGIASGGSLKYATPFSTPSVDTITDQLH
        E  +GK  A  G    ATPF+  +VD I+  LH
Subjt:  EAALGKGIASGGSLKYATPFSTPSVDTITDQLH

AT5G45140.1 nuclear RNA polymerase C2

9.1e-97

28.7

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Query:  DMD-TDDDEYSEVVNIHDLGEAFLKDFCKKSSMA--FFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKP
        D+D T+DD + +   +     A +K    K  +   F    GL+   ++S+N FI  G+         I      DPS           ++F KV + +P
Subjt:  DMD-TDDDEYSEVVNIHDLGEAFLKDFCKKSSMA--FFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKP

Query:  RFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWM--KEQQK----RDCE
                    N+ P   RL +MTY++ + +NI    Y       +K K+ KD             +V IGR+P+M+ S  C +  K++++     +C 
Subjt:  RFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWM--KEQQK----RDCE

Query:  FDHGGYFLIKGAEKIFIAQEQICLRRLWI-----SNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREV
         D GGYF+IKG EK+ + QEQ+   R+ I      NI   +V   +E+ +++ +I++           KEK+ L ++    +IP+ I+  A+G+ SD+E+
Subjt:  FDHGGYFLIKGAEKIFIAQEQICLRRLWI-----SNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREV

Query:  VDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSF-PPAEK-------IEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYT
        V ++  GR DP     L  S+ E  ++         K+AL++L+ ++KK S+  P EK       + D    ++       +QKC ++G M++ +++A  
Subjt:  VDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSF-PPAEK-------IEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYT

Query:  GRRKCDNRDDFRNKRFELAGELL----EREIKVHIAHARRRMEKALQRDLYGDR-DVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLG
         +   D++D   NKR EL+G+L+    E   K  ++ A + ++  L + +   R D     +      I+ GL R  STG +     RM R  G+   L 
Subjt:  GRRKCDNRDDFRNKRFELAGELL----EREIKVHIAHARRRMEKALQRDLYGDR-DVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLG

Query:  RANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLK-PIVPILFRCGMENL----VDDTSTPLSGKHKI
        R + + +M  + +   Q   + KV   R   PS WG +C   TP+GE+CGL+KN+++   V+ +  + P+V + ++ G+ +L     ++  TP S    +
Subjt:  RANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLK-PIVPILFRCGMENL----VDDTSTPLSGKHKI

Query:  FLNGEWVGVCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVE-NLNKIDKSKGENC-----TFQSLLDMGVIELIGTEEEE
         LNG  +G       F   LRR RR   +   V V  +E+   V + SD GR+ RPL++ +  ++++ +   +       TF   +  G+IE +   EE 
Subjt:  FLNGEWVGVCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVE-NLNKIDKSKGENC-----TFQSLLDMGVIELIGTEEEE

Query:  DCRTAWGIKHLMEKEGTTKY-----------SHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRT
        +   A     L E +GTT+            +H E++   +LG+  GL+P+ +H+ + R  YQ      QA+G    N   R+DTL + L YPQRPL  T
Subjt:  DCRTAWGIKHLMEKEGTTKY-----------SHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRT

Query:  MTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDS
         T + +G               +   GQNA VAV    GY+ ED++VMN++SL+RG  R   ++   A     ++      +D  +   +T     ++  
Subjt:  MTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDS

Query:  LDEDGFPFIGANLQSGDIVIGR-----------CAESGADHS-----IKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLG
        LD+DG    G  ++  DI I +            A S + +       K    E  +V +V L S+  G+      +R  R P LGDKFSS HGQKGV G
Subjt:  LDEDGFPFIGANLQSGDIVIGR-----------CAESGADHS-----IKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLG

Query:  FLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPS-----VDTITDQL
         +  QE+FPF+  GI PD+++NPH FPSR T G+++E    K   S G   Y + F   S     V+TI+  L
Subjt:  FLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPS-----VDTITDQL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGTTCTTTGGCCTGGTTCTTTTGGTAATGGCTAGAGAAGCCATGGCGGATGTGAACTGTAACCCCAATTCGGCTGAGGATACATTGACACTTGATGGGGTGAGAGA
ATCTTTAATCAGACAGGAGGATACTATCGTTTTTAGTCTCATTGAGAGAGCGAGGTTCCCTCTTAATCGGAAGATGTACAATCATAAACATGCTTCGATTCCTGGATTTT
CTGGTTCTCTGGTTGAGTTCGTGGTGAGAGAAACCGAGGCCATTCAAGCCAAGGCTGGTAGATATGAGAATCCTGAAGAAAATCCATTCTTCCCGGAACATTTGCCTCGT
CCTTTGGTGCCCCCTCACAAGTATCCAAATGTTTTGCATCCTGCAGGCGCGTCAATTAATATGAACAAAGCCATATGGGATTTTTACTTCAACAAATTCTTACCGATATT
GGTTGCCGACGGTGACGATGGAAATTATGCATCCACTGCTGCTAGTGATCTTGTTTGTTTGCAGGCTCTTTCGAGGAGGATTCACTGTGGAAAATACGTAGCTGAGGTGA
AATTTAGGGACGCCCCCCACGAATACGAGCCACCTATTCGTTCGCAGACAGTGGAAGAGGAAGGGAAGGGGTTTGATAAAAACCAAGTTACCTTACTGTTCTTTCAGGAA
AGAGATACTTTGATGAGGCTATTGACATTTGAGACAGTGGAAGAGATGGTGAAGAAGAGAGTAGAGAAGAAGGCCATGGTATTTGGGCAAGAAGTGACCCTCAACAACAC
AAATGAAGGAAAGTATAAGATTGATCCATCCCTCGCGTCTCGCCTTTTCGGAGAATGGGTAATGCCACTCACGAAGGACGTTGAAACACTCCCGGTGCTGATCAGAATTT
CCATTTTTCCGGCATGGAGGTTGACGACTGTGCCTTCAAGATGTTCCTACTCGGCCTCCCGTAAGGCCAATTTGACGCTCGAGGCGATGAGAGAAACTCTAATGAGACAG
GAAAATACGATCATTTTCAGTCTCATTGAGAGAACAAAGTTTCCTCTCAATCGGAAGACGTACAGTGATAATTACGCTTCAATTCCGGGATTCTTTGGTTCTCTGTTCGA
GTTCGTTGTAAGAGAAACAGAGGCATTAACTCCAAGGTCTAGTCTAGGATTCCTTGTTGCTTGGTTCTCATATTACTTCTTTTCAGTTGGTTTTGTGATCCGTGTTTATC
AATTCCAACTGTTAGGAATCTGTTTGGATTTTGTACAACAGGCCGGTAGATATGAAAATTTCGAAGAAAATCCCTTCTTCCCAGAAAATTTGCCTCGGCCATTGGTACCC
CCTCACAAGCATCCAGATGTTTTGCATCCTGCAGGCGCTTCAATTAATTTAAACAAACCCATATGGGATTTTTTACTCCACAAACTGTTGCCATCATTGGTTGCCGATGG
TGATGATGGAAACCATGCATCTACAGCTGCTAGTGATCTTGCATATTTACAGCTAAAACATCTTGTAAACTTCTATTGGATCTTTCCATATGACTGTGAAGAGATGGTGC
AGAAGAGAGTAGCTAAGAAGGCAATGGTGTTGGGGCAAGAATTGGGGCTCAACAAAACAGGTGAGAAAGGAAACTTATTACGAGAAATCCCAATTCCCCGACCAAACACT
GCCTTGGAGAATCGTAAATTTACAGTTCGCCCCCTCATCTTCCTTCGTATTTACCACTCATACTTCCGGGCTCCCGGCTTCACTTCCCTCGCTTTCTACTCAGAAGGATG
CATGCGTCATTTTCGTATCCCCTCGCCGTTTTGTCATTATAAGAAGCAGGGGGAGATCGTCACCTCTCTGAAACTGCGTGAGCGAGGACCGACGACATTGCGTGGATGCT
CCATTCTGATCTTTCTCGGAACGGATAAAGCCGCTGGTGTCGTCTGCAGGAAGCGTAGTGGAGTTTTGAGTGTGTGTGTGTGTTTCGAGCATCGCAGCATGAGGATTTTC
TTGTATGCGGAGTTCAGTGAGTGTAGCGTATATAATGATCGTTCTATGGCTTGGAAATGGAGTGGAAAGAATAGGCTAGTTCAAATCCCCGAGTCTTCTCTTGTTATTAC
TTCATTCGGAGCTGGAGTTGACGAGGATGCTTCTCCAAAGCATCTGCGTACTTCCCGATGCATATTTCTCAGGGCCATCTTGAACCTAATGGGGACATCGTCAGGCGCAA
AGGACGATATAGAGATGAATAGTGAGGCAGAAGACTTTTCACCTGGATCTGATATGGATACTGATGATGATGAATATTCTGAGGTAGTCAACATACATGATCTAGGGGAA
GCATTTTTAAAGGATTTCTGTAAGAAGTCATCAATGGCATTTTTTAATGAGTACGGCCTTATCAGTCACCAAATTAACTCTTACAATGACTTTATAAAAAGTGGTCTTCA
GAATGCCTTTGATTATTTTGGCGAGATTGTAGTTCAGCCAGGATATGACCCCTCTAAGAAAGGAGATGGGGAATGGAGATATGCTTCAGTGAAGTTTGGTAAGGTAACCC
TCGATAAGCCAAGGTTCTGGGGTGGTGCAGCAAGTGGAAAAGAGTATAACATGCTTCCTAGGCATGCTCGACTTCAGAACATGACTTATTCATCAAGGATGAAAATGAAT
ATTAACGTAGAGGTGTATACTCAAAGGTTAGTCAGAAGTGACAAATTTAAAACTGGAAAAGATCAATATGTTGATAAGGATCTTTTAAGTCAAGATAACAGGGATGTATT
TATAGGAAGACTACCTGTGATGGTGAATTCTGACCTTTGCTGGATGAAGGAACAGCAGAAACGTGACTGTGAATTTGATCATGGAGGTTATTTTTTAATCAAAGGTGCAG
AAAAAATATTCATAGCTCAAGAGCAGATTTGTTTGAGAAGACTCTGGATTTCTAATATTCAAGGTTGGACTGTGGCATACAGATCAGAAGTTAAGAGGAATAGACTAATT
ATTAGACTGGTAGAAAATTCGAAGTCTGAAGAACTAAAAAGCAAGGAGAAAGTCCTCAACGTATATTTCTTGTCCACAGAAATTCCTGTGTGGATTCTGTTCTTTGCTCT
TGGTGTTTCATCGGACAGAGAAGTAGTAGATTTAATTGATTATGGCAGAGATGATCCAAGTGTTCTGAATATTCTCTTTGCCTCTGTTCGTGAAGTTGACAATGATGATA
AGTGGAAAGATTTTCGAAGAGGTAAAAGAGCTCTGAATTTTTTGGACAATGAGATTAAAAAGACCAGTTTCCCACCTGCTGAAAAAATTGAAGATTGCCTTAACCTCTAT
CTTTTTGCCAGCTTGAAAGGCTTAAAGCAGAAGTGTCGTTTCCTTGGTTATATGGTTAAATGTCTCCTGCAGGCTTATACTGGCCGTAGGAAATGTGATAACAGGGATGA
TTTCCGTAATAAGAGGTTCGAGTTGGCTGGAGAATTGCTCGAACGAGAGATTAAAGTACATATTGCACATGCACGTAGGCGCATGGAAAAGGCTTTGCAAAGGGACCTTT
ATGGAGATCGTGATGTGCGTCCAATTGAACACTATTTGGATGCTTCCATAATCACTAATGGTCTATCCCGAGCATTCTCTACTGGAGCATGGGCACATCCATTCAAGAGG
ATGGAAAGGATTTCAGGTGTAGTGGCAACGCTTGGTCGTGCTAATCCCCTGCAGACAATGGCTGAATTGAGGAGAACACGTCAACAGGTTGCATACACTGGGAAAGTTGG
CGATGCAAGATATCCGCATCCTTCTCACTGGGGAAGGGTTTGCTTTCTCTCCACCCCGGATGGTGAAAATTGTGGGCTGATTAAAAATATGTCCATCACAGGACTTGTAA
GCTTAAACACATTGAAGCCTATAGTTCCCATATTGTTTCGCTGTGGGATGGAGAATTTGGTGGACGATACATCTACTCCTCTTAGTGGGAAGCACAAAATTTTTCTCAAT
GGGGAATGGGTTGGAGTTTGTGAAGATTCCCTTTCATTTGTCACGAAACTGAGACGCAGGCGACGAAGGAATTGGTTACTGCATCAGGTAGAAGTCAAAAGAGATGAACA
ACTGAAAGAAGTACGGATATTTTCCGACGCTGGAAGGATATTACGCCCTCTCTTAGTTGTAGAGAACTTAAACAAGATTGATAAGTCTAAGGGAGAAAATTGCACTTTTC
AATCCCTTTTGGACATGGGAGTAATTGAGCTTATTGGAACTGAAGAAGAAGAAGACTGTCGTACAGCTTGGGGTATTAAGCATCTTATGGAAAAAGAAGGGACTACGAAA
TATTCCCATTGCGAACTTGACATGTCATTTTTATTGGGATTAAGCTGCGGACTTGTCCCATTTGCAAATCATGACCATGCTAGGAGGGTTTTGTATCAGTCCCAAAAACA
CTCTAATCAAGCTATTGGATTTTCAACAACCAATTCTAATTTTCGCGTGGATACTCTATCTCACCAGTTACACTATCCACAAAGGCCGCTTTTTCGTACAATGACTGCTG
ATTGTCTTGGAACGCCGGGATACCTTTCATCTCACACTGGTATACTACCAAAACCCGAGTTCTATAATGGTCAGAATGCTATTGTGGCTGTCAATGTTCACCTGGGATAC
AACCAAGAAGATTCATTAGTAATGAACCGGGCCTCTCTGGAGCGTGGTATGTTTCGATCTGAGCATATTCGGAGTTACAAGGCTGAGGTGGATAATAAAGAATCTTCTGA
AAAGAGGAGGAAATCTGATGATGCAATAAATTTTGGGAAGACTCAAAGTAAAATTGGAAGAGTCGACAGCTTAGATGAAGATGGCTTCCCTTTCATTGGTGCAAACTTGC
AGAGTGGAGACATTGTCATTGGAAGGTGTGCTGAATCTGGGGCTGATCACAGTATCAAACTGAAGCACACTGAGAAGGGCATGGTCCAGAAAGTTGTGCTCTCTTCTAAT
GATGACGGGAAGAATTATGCTGTCGTATGCCTGAGACAGGTTCGTTCTCCATGTCTTGGAGACAAGTTTTCTAGCATGCATGGACAAAAGGGAGTTCTGGGCTTTCTGGA
GTCTCAAGAGAATTTCCCCTTCACCATCCAGGGGATAGTTCCAGATATTGTTATAAACCCACATGCTTTTCCTTCGCGACAAACTCCTGGTCAATTACTGGAAGCTGCTC
TTGGGAAAGGGATTGCTTCTGGCGGTTCGCTAAAATATGCCACTCCTTTCTCCACTCCTTCCGTTGATACCATTACAGACCAGCTTCACAG

mRNA sequence

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Protein sequence

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MLFFGLVLLVMAREAMADVNCNPNSAEDTLTLDGVRESLIRQEDTIVFSLIERARFPLNRKMYNHKHASIPGFSGSLVEFVVRETEAIQAKAGRYENPEENPFFPEHLPR
PLVPPHKYPNVLHPAGASINMNKAIWDFYFNKFLPILVADGDDGNYASTAASDLVCLQALSRRIHCGKYVAEVKFRDAPHEYEPPIRSQTVEEEGKGFDKNQVTLLFFQE
RDTLMRLLTFETVEEMVKKRVEKKAMVFGQEVTLNNTNEGKYKIDPSLASRLFGEWVMPLTKDVETLPVLIRISIFPAWRLTTVPSRCSYSASRKANLTLEAMRETLMRQ
ENTIIFSLIERTKFPLNRKTYSDNYASIPGFFGSLFEFVVRETEALTPRSSLGFLVAWFSYYFFSVGFVIRVYQFQLLGICLDFVQQAGRYENFEENPFFPENLPRPLVP
PHKHPDVLHPAGASINLNKPIWDFLLHKLLPSLVADGDDGNHASTAASDLAYLQLKHLVNFYWIFPYDCEEMVQKRVAKKAMVLGQELGLNKTGEKGNLLREIPIPRPNT
ALENRKFTVRPLIFLRIYHSYFRAPGFTSLAFYSEGCMRHFRIPSPFCHYKKQGEIVTSLKLRERGPTTLRGCSILIFLGTDKAAGVVCRKRSGVLSVCVCFEHRSMRIF
LYAEFSECSVYNDRSMAWKWSGKNRLVQIPESSLVITSFGAGVDEDASPKHLRTSRCIFLRAILNLMGTSSGAKDDIEMNSEAEDFSPGSDMDTDDDEYSEVVNIHDLGE
AFLKDFCKKSSMAFFNEYGLISHQINSYNDFIKSGLQNAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKPRFWGGAASGKEYNMLPRHARLQNMTYSSRMKMN
INVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNRDVFIGRLPVMVNSDLCWMKEQQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLI
IRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREVVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEIKKTSFPPAEKIEDCLNLY
LFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHPFKR
MERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLKPIVPILFRCGMENLVDDTSTPLSGKHKIFLN
GEWVGVCEDSLSFVTKLRRRRRRNWLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENCTFQSLLDMGVIELIGTEEEEDCRTAWGIKHLMEKEGTTK
YSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGY
NQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSN
DDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVDTITDQLHX

Sgr027862 (gene) of Monk fruit (Qingpiguo) v1 genome