; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr028191 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr028191
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptiontranslation initiation factor IF-1, chloroplastic-like
Genome locationtig00153056:4429798..4430247
RNA-Seq ExpressionSgr028191
SyntenySgr028191
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR004368 - Translation initiation factor IF-1
IPR006196 - RNA-binding domain, S1, IF1 type
IPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064332.1 translation initiation factor IF-1 [Cucumis melo var. makuwa]4.0e-5680.54Show/hide
Query:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL
        MSSTN LQFPL  +HFRPPS      +LLFP +KSHLSVVSI FP+SQFL  P H P   A+MAKSPK+D+SEQK S EGSV+ESLPNGMFRVRLDNEDL
Subjt:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL

Query:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS
        ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSS KDSSS
Subjt:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS

XP_022139601.1 uncharacterized protein LOC111010461 [Momordica charantia]3.5e-6084.67Show/hide
Query:  MSSTNFLQFPLF-HAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNED
        M++TNFLQFPL   AH RPPSSSSSL++LLFP+L+SH SVVSIPFP+S FL  PYH    L VMAKSPKSDSSEQKWS EGSV ESLPNGMFRVRLDNED
Subjt:  MSSTNFLQFPLF-HAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNED

Query:  LILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS
        LILGYISGKIRKNFVRILPGDRVR+EVSRYDSTKGRIVYRLRSSTKDSSS
Subjt:  LILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS

XP_022976599.1 uncharacterized protein LOC111476947 [Cucurbita maxima]9.0e-5680.56Show/hide
Query:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL
        MSSTN L+FPL H H RPPS      +L FP +KSHLSVVSI FP+SQFLRNP HGPA  A+MAK PKSDS+EQKWS EGS++ESLPNGMFRVRLDNEDL
Subjt:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL

Query:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSST
        ILGYI GKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYR RSST
Subjt:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSST

XP_022981301.1 translation initiation factor IF-1, chloroplastic-like [Cucurbita maxima]7.6e-5582.55Show/hide
Query:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL
        MSSTN LQFPL     RPP +S      LFPT KSHLSVVSIPFPSSQFL NP HGPAS A MAKSPKS+SSEQK+S EGSVIESLPNGMFRV+LDNEDL
Subjt:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL

Query:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS
        ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYR R STKD SS
Subjt:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS

XP_038899010.1 translation initiation factor IF-1, chloroplastic [Benincasa hispida]1.4e-5679.87Show/hide
Query:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL
        MSST  LQFPL  +HFRPPS      +L FP +KSHLSVVSI FP++QFL NP H  A   +MAKSPK+D+SEQKWS EGSV+ESLPNGMFRVRLDNEDL
Subjt:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL

Query:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS
        ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS
Subjt:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS

TrEMBL top hitse value%identityAlignment
A0A5A7V7J3 Translation initiation factor IF-12.0e-5680.54Show/hide
Query:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL
        MSSTN LQFPL  +HFRPPS      +LLFP +KSHLSVVSI FP+SQFL  P H P   A+MAKSPK+D+SEQK S EGSV+ESLPNGMFRVRLDNEDL
Subjt:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL

Query:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS
        ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSS KDSSS
Subjt:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS

A0A6J1CD60 uncharacterized protein LOC1110104611.7e-6084.67Show/hide
Query:  MSSTNFLQFPLF-HAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNED
        M++TNFLQFPL   AH RPPSSSSSL++LLFP+L+SH SVVSIPFP+S FL  PYH    L VMAKSPKSDSSEQKWS EGSV ESLPNGMFRVRLDNED
Subjt:  MSSTNFLQFPLF-HAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNED

Query:  LILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS
        LILGYISGKIRKNFVRILPGDRVR+EVSRYDSTKGRIVYRLRSSTKDSSS
Subjt:  LILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS

A0A6J1FLU6 translation initiation factor IF-1, chloroplastic-like7.0e-5479.87Show/hide
Query:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL
        MSSTN LQFPL     RPPS      + LFP +KSH+SVVSIPFPSSQFL NP HGP S   MAKSPKS+SSEQK+S EGSVIESLPNGMFRV+LDNEDL
Subjt:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL

Query:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS
        ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYR R STKD SS
Subjt:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS

A0A6J1IP00 uncharacterized protein LOC1114769474.4e-5680.56Show/hide
Query:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL
        MSSTN L+FPL H H RPPS      +L FP +KSHLSVVSI FP+SQFLRNP HGPA  A+MAK PKSDS+EQKWS EGS++ESLPNGMFRVRLDNEDL
Subjt:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL

Query:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSST
        ILGYI GKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYR RSST
Subjt:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSST

A0A6J1IW62 translation initiation factor IF-1, chloroplastic-like3.7e-5582.55Show/hide
Query:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL
        MSSTN LQFPL     RPP +S      LFPT KSHLSVVSIPFPSSQFL NP HGPAS A MAKSPKS+SSEQK+S EGSVIESLPNGMFRV+LDNEDL
Subjt:  MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDL

Query:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS
        ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYR R STKD SS
Subjt:  ILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS

SwissProt top hitse value%identityAlignment
A0A370 Translation initiation factor IF-1, chloroplastic3.7e-2878.67Show/hide
Query:  EQKWSSEGSVIESLPNGMFRVRLDNEDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDS
        EQKW+ EG + ESLPNGMFRVRLDNEDLILGY+SGKIR++F+RILPGDRV++EVSRYDST+GRI+YRLR+  KDS
Subjt:  EQKWSSEGSVIESLPNGMFRVRLDNEDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDS

Q09G11 Translation initiation factor IF-1, chloroplastic2.8e-2878.95Show/hide
Query:  EQKWSSEGSVIESLPNGMFRVRLDNEDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSS
        EQKW  EG + ESLPNGMFRVRLDNEDLILGY+SGKIR++F+RILPGDRV++EVSRYDST+GRI+YRLRS  KDS+
Subjt:  EQKWSSEGSVIESLPNGMFRVRLDNEDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSS

Q7ICQ5 Translation initiation factor IF-1, chloroplastic8.3e-2878.67Show/hide
Query:  EQKWSSEGSVIESLPNGMFRVRLDNEDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDS
        EQKW  EG + ESLPNGMFRVRLDNEDLILGY+SGKIR++F+RILPGDRV++EVSRYDST+GRI+YRLR+  KDS
Subjt:  EQKWSSEGSVIESLPNGMFRVRLDNEDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDS

Q94KR7 Translation initiation factor IF-1, chloroplastic3.6e-3156.34Show/hide
Query:  LQFPLFHAHF--RPPSSSSSLTSLLFPTLKSHLSVVSIP--FPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDLIL
        L  P+ H  +   P  S +  + L  P     LS ++ P   P++         PA  A  A  P   S EQKW  EG ++ESLPNGMFRVRLDNEDLIL
Subjt:  LQFPLFHAHF--RPPSSSSSLTSLLFPTLKSHLSVVSIP--FPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDLIL

Query:  GYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSST
        GYISGKIRKN+VRILPGDRV+VEV+RYDS+KGRIVYRLRSST
Subjt:  GYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSST

Q94KR9 Translation initiation factor IF-1, chloroplastic3.7e-2878.87Show/hide
Query:  SSEQKWSSEGSVIESLPNGMFRVRLDNEDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLR
        S EQKW+ EGS+ ESLPNGMFRV+LDN D++LGYISGKIRKNF+R+LPGDRV++EVSRYDS+KGRI+YRLR
Subjt:  SSEQKWSSEGSVIESLPNGMFRVRLDNEDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLR

Arabidopsis top hitse value%identityAlignment
AT4G11175.1 Nucleic acid-binding, OB-fold-like protein5.3e-2262.07Show/hide
Query:  GPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRS
        G A+ +  AK P+      K   EG V ESLPNGMFRV L+N D ILGYI GKIRKNF+RILPGD+V+VE+S YDSTKGRI++R+ S
Subjt:  GPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDLILGYISGKIRKNFVRILPGDRVRVEVSRYDSTKGRIVYRLRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGCACGAATTTCCTCCAATTCCCGCTCTTCCACGCCCACTTCCGGCCACCGTCCTCCTCTTCCTCTCTAACCTCTCTTCTTTTTCCCACTCTCAAATCCCATCT
CTCCGTCGTCTCTATCCCTTTTCCGAGCTCTCAATTCCTCCGCAACCCTTACCATGGTCCGGCAAGCCTCGCTGTCATGGCGAAGTCCCCAAAAAGCGATAGCTCGGAGC
AGAAATGGAGCTCCGAAGGCTCTGTCATAGAGTCTCTTCCCAATGGGATGTTCAGAGTTCGATTGGATAATGAAGACCTCATTCTTGGCTATATATCTGGTAAGATTCGA
AAGAATTTTGTGCGTATATTGCCTGGAGATAGGGTCAGGGTTGAAGTTAGTCGTTATGACTCTACCAAAGGCCGTATTGTTTATAGACTCCGGAGCAGTACTAAGGATTC
ATCTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGCACGAATTTCCTCCAATTCCCGCTCTTCCACGCCCACTTCCGGCCACCGTCCTCCTCTTCCTCTCTAACCTCTCTTCTTTTTCCCACTCTCAAATCCCATCT
CTCCGTCGTCTCTATCCCTTTTCCGAGCTCTCAATTCCTCCGCAACCCTTACCATGGTCCGGCAAGCCTCGCTGTCATGGCGAAGTCCCCAAAAAGCGATAGCTCGGAGC
AGAAATGGAGCTCCGAAGGCTCTGTCATAGAGTCTCTTCCCAATGGGATGTTCAGAGTTCGATTGGATAATGAAGACCTCATTCTTGGCTATATATCTGGTAAGATTCGA
AAGAATTTTGTGCGTATATTGCCTGGAGATAGGGTCAGGGTTGAAGTTAGTCGTTATGACTCTACCAAAGGCCGTATTGTTTATAGACTCCGGAGCAGTACTAAGGATTC
ATCTTCATGA
Protein sequenceShow/hide protein sequence
MSSTNFLQFPLFHAHFRPPSSSSSLTSLLFPTLKSHLSVVSIPFPSSQFLRNPYHGPASLAVMAKSPKSDSSEQKWSSEGSVIESLPNGMFRVRLDNEDLILGYISGKIR
KNFVRILPGDRVRVEVSRYDSTKGRIVYRLRSSTKDSSS