CuGenDBv2

Gene ID	Sgr028196
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	E3 ubiquitin-protein ligase RMA3
Genome location	tig00153056:4460366..4460671
RNA-Seq Expression	Sgr028196
Synteny	Sgr028196
Gene Ontology terms	GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0016567 - protein ubiquitination (biological process) GO:0071712 - ER-associated misfolded protein catabolic process (biological process) GO:0005783 - endoplasmic reticulum (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0044390 - ubiquitin-like protein conjugating enzyme binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domains	IPR045103 - E3 ubiquitin-protein ligase RNF5/RNF185-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591967.1 E3 ubiquitin-protein ligase RMA3, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-37

80.77

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Query:  MNALPNSNATSALHPSQELHSNYIR---PP-----SHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNT
        MNALP+SNA SALHPSQ+LH NYIR   PP      HPIYHQQYFPQAY D ASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYP YN 
Subjt:  MNALPNSNATSALHPSQELHSNYIR---PP-----SHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNT

Query:  PCQG
           G
Subjt:  PCQG

XP_008452467.1 PREDICTED: E3 ubiquitin-protein ligase RMA3 [Cucumis melo]

8.0e-40

86.46

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Query:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG
        MN  P SN++SA +PSQELHSNYIR PSHPIYHQQYFPQAYG+FASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYN    G
Subjt:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG

XP_022139659.1 E3 ubiquitin-protein ligase RMA3-like [Momordica charantia]

8.9e-39

85.26

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Query:  NALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG
        N L NSNATSALHPSQ+LH NY R PSHPIYHQQYFPQAYGD A+Y PSYLGNAVITSLLNPTIGMFGETVFTRIFGSVD NLLPYPPYN    G
Subjt:  NALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG

XP_023535125.1 E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo]

2.2e-37

81.37

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Query:  MNALPNSNATSALHPSQELHSNYIRPPS------HPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPC
        MNA P+SNA SALHPSQ+LH NYIR PS      HPIYHQQYFPQAY D ASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYP YN   
Subjt:  MNALPNSNATSALHPSQELHSNYIRPPS------HPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPC

Query:  QG
         G
Subjt:  QG

XP_038899693.1 E3 ubiquitin-protein ligase RMA3 [Benincasa hispida]

3.8e-42

89.58

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Query:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG
        MN  P+SNATSALHPSQELH NY+R PSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYN    G
Subjt:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZN0 RING-type domain-containing protein

4.0e-37

82.47

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Query:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQA-YGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG
        MN   +SN++S L+PSQELHSNYIR PSHPIYHQQYFPQA YG+FASY+PSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPY PYN    G
Subjt:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQA-YGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG

A0A1S3BTX0 E3 ubiquitin-protein ligase RMA3

3.9e-40

86.46

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Query:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG
        MN  P SN++SA +PSQELHSNYIR PSHPIYHQQYFPQAYG+FASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYN    G
Subjt:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG

A0A5A7VD79 E3 ubiquitin-protein ligase RMA3

3.9e-40

86.46

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Query:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG
        MN  P SN++SA +PSQELHSNYIR PSHPIYHQQYFPQAYG+FASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYN    G
Subjt:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG

A0A6J1CDN1 E3 ubiquitin-protein ligase RMA3-like

4.3e-39

85.26

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Query:  NALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG
        N L NSNATSALHPSQ+LH NY R PSHPIYHQQYFPQAYGD A+Y PSYLGNAVITSLLNPTIGMFGETVFTRIFGSVD NLLPYPPYN    G
Subjt:  NALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG

A0A6J1J1I0 E3 ubiquitin-protein ligase RMA3-like

3.4e-36

78.12

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Query:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG
        MN  P+SNA SALHPS+ELH NYIR P H IYHQQYFPQAYG+FA YAPSYLGNA++TSLLNPTIG+ GETV+TRIFGS DGNLLPYPPYN    G
Subjt:  MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQG

SwissProt top hits

e value

%identity

Alignment

Q8GUK7 E3 ubiquitin-protein ligase RMA3

7.4e-04

38.75

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Query:  ATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLL-PY
        + S+L+PS  L    + P  H   + QY P+    F +   + L NAV+ S L P IGMFG+ V+TRIFG+    +  PY
Subjt:  ATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLL-PY

Arabidopsis top hits

e value

%identity

Alignment

AT4G27470.1 RING membrane-anchor 3

5.2e-05

38.75

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Query:  ATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLL-PY
        + S+L+PS  L    + P  H   + QY P+    F +   + L NAV+ S L P IGMFG+ V+TRIFG+    +  PY
Subjt:  ATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLL-PY

Sequences

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CDS sequence

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ATGAACGCACTGCCCAATTCCAATGCAACCTCTGCGTTGCATCCAAGCCAGGAACTTCATTCAAATTATATCCGCCCACCTTCTCACCCGATCTATCACCAACAATATTT
CCCCCAGGCATATGGTGACTTTGCCTCATATGCACCGTCTTATCTCGGTAATGCTGTGATAACAAGTCTGCTAAACCCGACGATTGGGATGTTTGGAGAAACGGTTTTCA
CAAGAATTTTTGGTAGCGTGGATGGGAACTTGTTGCCATACCCCCCTTACAACACTCCATGTCAGGGAATGCCAGTACCAGAATGA

mRNA sequence

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Protein sequence

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MNALPNSNATSALHPSQELHSNYIRPPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNTPCQGMPVPE

Sgr028196 (gene) of Monk fruit (Qingpiguo) v1 genome