CuGenDBv2

Gene ID	Sgr028426
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	zinc finger protein VAR3, chloroplastic
Genome location	tig00153145:1945127..1951547
RNA-Seq Expression	Sgr028426
Synteny	Sgr028426
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7027750.1 Zinc finger protein VAR3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

9.4e-165

59.73

Show/hide

Query:  PSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL----------------------------------------
        P +  L  SF  I ASRHVHSQVST GD+ G+ E SGS  G FSPDS  W+EWS FL SL                                        
Subjt:  PSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL----------------------------------------

Query:  -----------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTF------------------LPKVTCTVEICNPD
                   E L  SV   L       + + ++     E QVLDSDKARTIDLFKFILSYARNPT                   L    C +   NPD
Subjt:  -----------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTF------------------LPKVTCTVEICNPD

Query:  PKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPRA------------------------------------------------------PSLSNININ
        PKLLET NQFSDKY QSR PYGPKVEMKRGDWICPR                                                       PSLSNININ
Subjt:  PKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPRA------------------------------------------------------PSLSNININ

Query:  SGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKL
        SGLGND GS   KVDIDSKLAANEEKAQRWFSKISQLD TSD G+SITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGND VPENNSS+L
Subjt:  SGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKL

Query:  AGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSN
        + +NNSLDKT S   DDILGR S+NSQSTN GNEQG   NY  SS+SGS QYES KG NSSYVPFVPLPPDMFAKKPKNSSMESE+  +D NKS+ S SN
Subjt:  AGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSN

Query:  EPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR
        E  GS S SN  NEVGDIP  ++ P   T+KINEGKEE EKSERWFKRVAELHNVTDL SAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPA +
Subjt:  EPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR

XP_022154255.1 zinc finger protein VAR3, chloroplastic isoform X1 [Momordica charantia]

1.5e-167

61.49

Show/hide

Query:  LISSFHPISASRHVHSQVSTVGDDCGSLEASG-SGYGAFSPDSCTWQEWSKFLESLEA-----LATSVARILRVK-----------------------TG
        L  SF PI+ASR +HSQVSTVGDD GSLE SG SGYGAFSP+S   +EWSKFL+SL+A        S + +L V+                        G
Subjt:  LISSFHPISASRHVHSQVSTVGDDCGSLEASG-SGYGAFSPDSCTWQEWSKFLESLEA-----LATSVARILRVK-----------------------TG

Query:  MLIEED-----------------------EIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTFLPK--------VTCTV-----EIC-----NPDPKLL
        +L   D                       E+    SE QVLDSDKARTIDLFKFILSYARNPT   +        V  +V     EIC     NPDPKL+
Subjt:  MLIEED-----------------------EIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTFLPK--------VTCTV-----EIC-----NPDPKLL

Query:  ETVNQFSDKYGQSRGPYGPKVEMKRGDWICPR------------------------------------------------------APSLSNININSGLG
        ETVNQFSDKYGQSRGPYGPK+EMKRGDWICPR                                                      APSLSNININSGLG
Subjt:  ETVNQFSDKYGQSRGPYGPKVEMKRGDWICPR------------------------------------------------------APSLSNININSGLG

Query:  NDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGAN
        ND GS ATKVDIDSKLAANEEKAQRWFSKISQ D TSD G+SI DEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGND VPENNSSK+  AN
Subjt:  NDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGAN

Query:  NSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSNEPIG
         SLDKTISQ+LDDILGRTS+N Q++NVGNEQGT     +SS SGS QYESLK  NSSYVPFVPLPPDMFAKKP N            NKSV S +NE  G
Subjt:  NSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSNEPIG

Query:  SASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR
        SAS SN+ N+VG IP+TVEKP+NQTEK+NEG+EE EKSERWFKRVAELHNV+DL SAISDEDFPEIMPMRKG+NRFVVSKKKDRSLTSPA +
Subjt:  SASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR

XP_022942158.1 zinc finger protein VAR3, chloroplastic [Cucurbita moschata]

1.7e-166

60.23

Show/hide

Query:  PSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL----------------------------------------
        P +  L  SF  I ASRHVHSQVST GD+ G+ E SGS  G FSPDS  W+EWS FL SL                                        
Subjt:  PSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL----------------------------------------

Query:  -----------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTF------------------LPKVTCTVEICNPD
                   E L  SV   L       + + ++     E QVLDSDKARTIDLFKFILSYARNPT                   L    C +   NPD
Subjt:  -----------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTF------------------LPKVTCTVEICNPD

Query:  PKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPRA------------------------------------------------------PSLSNININ
        PKLLET NQFSDKY QSRGPYGPKVEMKRGDWICPR                                                       PSLSNININ
Subjt:  PKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPRA------------------------------------------------------PSLSNININ

Query:  SGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKL
        SGLGND GSH  KVDIDSKLAANEEKAQRWFSKISQLD TSD G+SITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGND VPENNSS+L
Subjt:  SGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKL

Query:  AGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSN
        + +NNSLDKT S   DDILGR S+NSQSTN GNEQG   NY  SS+SGS QYES KG NSSYVPFVPLPPDMFAKKPKNSSMESE+  +D NKS+ S SN
Subjt:  AGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSN

Query:  EPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR
        E  GS S SN  NEVGDIP     P N T+KINEGKEE EKSERWFKRVAELHNVTDL SAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPA +
Subjt:  EPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR

XP_022971393.1 zinc finger protein VAR3, chloroplastic [Cucurbita maxima]

6.7e-163

59.56

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Query:  PSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL----------------------------------------
        P +  L  SF  I ASRHVHSQVST GD+ G+ E SGS  G FS DS  W+EWSKFL SL                                        
Subjt:  PSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL----------------------------------------

Query:  -----------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTF------------------LPKVTCTVEICNPD
                   E L  SV   L       + + ++     E QVLDSDKARTIDLFKFILSYARNPT                   L    C +   NPD
Subjt:  -----------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTF------------------LPKVTCTVEICNPD

Query:  PKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPRA------------------------------------------------------PSLSNININ
        PKLLET NQFSDKY QSRGPYGPKVEMKRGDWICPR                                                       PSLSNININ
Subjt:  PKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPRA------------------------------------------------------PSLSNININ

Query:  SGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKL
        SGLGND GS   KVDIDSKLAANEEKAQRWFSKISQLD TSD G+SITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGND VPENN S+L
Subjt:  SGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKL

Query:  AGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSN
        + + NSLDKT S   DDILGR SSNSQSTN GNEQG   NY  SSSSGS QYES KG +SSYVPFVPL PDMFAKKPKNSSME+E+  +D NKS+ SGSN
Subjt:  AGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSN

Query:  EPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR
        E  GS S SN  NEVGDIP     P N  +KINEGKEE EKSERWFKRVAELHNVTDL SAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPA +
Subjt:  EPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR

XP_038904067.1 zinc finger protein VAR3, chloroplastic [Benincasa hispida]

2.6e-170

58.66

Show/hide

Query:  SPPPPFLSPPRLSLPQLLPTFSLLFLASPHQRLPSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL-------
        S P P +   R S  +L   +   F +S     PS+ NL SSF+PI ASRHVHSQ+ST+GDD G+ E SGS  G FSPDS TW+EWS+FL SL       
Subjt:  SPPPPFLSPPRLSLPQLLPTFSLLFLASPHQRLPSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL-------

Query:  --------------------------------------------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPT
                                                    E L  SV+  L       + + ++       QV D DKARTIDLFKFILSYARNPT
Subjt:  --------------------------------------------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPT

Query:  F------------------LPKVTCTVEICNPDPKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPR-------------------------------
                           L +  C +   NPDPK LE  NQFSDKYGQSRG YGPK+EMKRGDWICPR                               
Subjt:  F------------------LPKVTCTVEICNPDPKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPR-------------------------------

Query:  -----------------------APSLSNININSGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVV
                               AP +S IN+NSGLG+D GS ATK+DIDSKLAANEEKAQRWF KISQLD TSD G+SITDEDFPEIMPLRKGVNRFVV
Subjt:  -----------------------APSLSNININSGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVV

Query:  STRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVP
        STRKTPLERRLANAQYRRNLGND VPEN SS+L+ ANNSLDKTIS+SLDDILGRTS+NS+S NVG EQGTG N  S SSSGS QYESLKGSNSSYVPFVP
Subjt:  STRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVP

Query:  LPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSNEPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDF
        LPPDMFAKKPKNSSMESE+  +D N+S+SSGSNE   SAS SN  NEVGDIP T    LNQ EK NEGKEEAEKSERWFKRVAELHNVTDL SAIS+EDF
Subjt:  LPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSNEPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDF

Query:  PEIMPMRKGENRFVVSKKKDRSLTSPAIR
        PEIMPMRKGENRFVVSKKKDRSLTSPA +
Subjt:  PEIMPMRKGENRFVVSKKKDRSLTSPAIR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B849 zinc finger protein VAR3, chloroplastic

1.5e-160

55.96

Show/hide

Query:  SPPPPFLSPPRLSLPQLLPTFSLLFLASPHQRLPSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL-------
        S P P +   R S  +L   +   F +S H   PS+  L SSFHPI ASRHVHSQVST+GDD GS E  GS    FSPDS TW+EWS+FL  L       
Subjt:  SPPPPFLSPPRLSLPQLLPTFSLLFLASPHQRLPSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL-------

Query:  -----------------------EALATSVAR------ILRVKTGMLIE---------------EDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPT
                                 LA S+ R      + R    +L+E               + ++     E QV D DKA  IDLFKFILSYARNP 
Subjt:  -----------------------EALATSVAR------ILRVKTGMLIE---------------EDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPT

Query:  F------------------LPKVTCTVEICNPDPKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPR-------------------------------
                           L +  C +   NPDP L ET NQ  DKY Q RGPYGPK+EMKRGDWICPR                               
Subjt:  F------------------LPKVTCTVEICNPDPKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPR-------------------------------

Query:  -----------------------APSLSNININSGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVV
                               APS+SNIN N   GND GS ATKVDIDSKLA NEEKAQRWFSKISQLD  SD G+SI DEDFPEIMPLRKGVNRFVV
Subjt:  -----------------------APSLSNININSGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVV

Query:  STRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVP
        STRKTPLERRLANAQY+ NLGN  VPENNSS+L+ +NN LD+ I Q LDD  GRTS+NSQSTN+G EQGT  NY SSSSSGSLQY SLKGSNS+YVPFVP
Subjt:  STRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVP

Query:  LPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSNEPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDF
        LPPDMFAKKP NS+MES++  +D NKS+SSGSNE  G+AS SN+  EVGD P     P N+TEKINEGKE+AEKSERWFKRVAELHNVTDL SAISDEDF
Subjt:  LPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSNEPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDF

Query:  PEIMPMRKGENRFVVSKKKDRSLTSPAIR
        PEIMP+RKGENRFVVSKKKDRSLTSPA +
Subjt:  PEIMPMRKGENRFVVSKKKDRSLTSPAIR

A0A5D3DPI0 Zinc finger protein VAR3

1.5e-160

55.96

Show/hide

Query:  SPPPPFLSPPRLSLPQLLPTFSLLFLASPHQRLPSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL-------
        S P P +   R S  +L   +   F +S H   PS+  L SSFHPI ASRHVHSQVST+GDD GS E  GS    FSPDS TW+EWS+FL  L       
Subjt:  SPPPPFLSPPRLSLPQLLPTFSLLFLASPHQRLPSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL-------

Query:  -----------------------EALATSVAR------ILRVKTGMLIE---------------EDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPT
                                 LA S+ R      + R    +L+E               + ++     E QV D DKA  IDLFKFILSYARNP 
Subjt:  -----------------------EALATSVAR------ILRVKTGMLIE---------------EDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPT

Query:  F------------------LPKVTCTVEICNPDPKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPR-------------------------------
                           L +  C +   NPDP L ET NQ  DKY Q RGPYGPK+EMKRGDWICPR                               
Subjt:  F------------------LPKVTCTVEICNPDPKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPR-------------------------------

Query:  -----------------------APSLSNININSGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVV
                               APS+SNIN N   GND GS ATKVDIDSKLA NEEKAQRWFSKISQLD  SD G+SI DEDFPEIMPLRKGVNRFVV
Subjt:  -----------------------APSLSNININSGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVV

Query:  STRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVP
        STRKTPLERRLANAQY+ NLGN  VPENNSS+L+ +NN LD+ I Q LDD  GRTS+NSQSTN+G EQGT  NY SSSSSGSLQY SLKGSNS+YVPFVP
Subjt:  STRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVP

Query:  LPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSNEPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDF
        LPPDMFAKKP NS+MES++  +D NKS+SSGSNE  G+AS SN+  EVGD P     P N+TEKINEGKE+AEKSERWFKRVAELHNVTDL SAISDEDF
Subjt:  LPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSNEPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDF

Query:  PEIMPMRKGENRFVVSKKKDRSLTSPAIR
        PEIMP+RKGENRFVVSKKKDRSLTSPA +
Subjt:  PEIMPMRKGENRFVVSKKKDRSLTSPAIR

A0A6J1DJ45 zinc finger protein VAR3, chloroplastic isoform X1

7.5e-168

61.49

Show/hide

Query:  LISSFHPISASRHVHSQVSTVGDDCGSLEASG-SGYGAFSPDSCTWQEWSKFLESLEA-----LATSVARILRVK-----------------------TG
        L  SF PI+ASR +HSQVSTVGDD GSLE SG SGYGAFSP+S   +EWSKFL+SL+A        S + +L V+                        G
Subjt:  LISSFHPISASRHVHSQVSTVGDDCGSLEASG-SGYGAFSPDSCTWQEWSKFLESLEA-----LATSVARILRVK-----------------------TG

Query:  MLIEED-----------------------EIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTFLPK--------VTCTV-----EIC-----NPDPKLL
        +L   D                       E+    SE QVLDSDKARTIDLFKFILSYARNPT   +        V  +V     EIC     NPDPKL+
Subjt:  MLIEED-----------------------EIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTFLPK--------VTCTV-----EIC-----NPDPKLL

Query:  ETVNQFSDKYGQSRGPYGPKVEMKRGDWICPR------------------------------------------------------APSLSNININSGLG
        ETVNQFSDKYGQSRGPYGPK+EMKRGDWICPR                                                      APSLSNININSGLG
Subjt:  ETVNQFSDKYGQSRGPYGPKVEMKRGDWICPR------------------------------------------------------APSLSNININSGLG

Query:  NDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGAN
        ND GS ATKVDIDSKLAANEEKAQRWFSKISQ D TSD G+SI DEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGND VPENNSSK+  AN
Subjt:  NDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGAN

Query:  NSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSNEPIG
         SLDKTISQ+LDDILGRTS+N Q++NVGNEQGT     +SS SGS QYESLK  NSSYVPFVPLPPDMFAKKP N            NKSV S +NE  G
Subjt:  NSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSNEPIG

Query:  SASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR
        SAS SN+ N+VG IP+TVEKP+NQTEK+NEG+EE EKSERWFKRVAELHNV+DL SAISDEDFPEIMPMRKG+NRFVVSKKKDRSLTSPA +
Subjt:  SASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR

A0A6J1FU33 zinc finger protein VAR3, chloroplastic

8.3e-167

60.23

Show/hide

Query:  PSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL----------------------------------------
        P +  L  SF  I ASRHVHSQVST GD+ G+ E SGS  G FSPDS  W+EWS FL SL                                        
Subjt:  PSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL----------------------------------------

Query:  -----------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTF------------------LPKVTCTVEICNPD
                   E L  SV   L       + + ++     E QVLDSDKARTIDLFKFILSYARNPT                   L    C +   NPD
Subjt:  -----------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTF------------------LPKVTCTVEICNPD

Query:  PKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPRA------------------------------------------------------PSLSNININ
        PKLLET NQFSDKY QSRGPYGPKVEMKRGDWICPR                                                       PSLSNININ
Subjt:  PKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPRA------------------------------------------------------PSLSNININ

Query:  SGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKL
        SGLGND GSH  KVDIDSKLAANEEKAQRWFSKISQLD TSD G+SITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGND VPENNSS+L
Subjt:  SGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKL

Query:  AGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSN
        + +NNSLDKT S   DDILGR S+NSQSTN GNEQG   NY  SS+SGS QYES KG NSSYVPFVPLPPDMFAKKPKNSSMESE+  +D NKS+ S SN
Subjt:  AGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSN

Query:  EPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR
        E  GS S SN  NEVGDIP     P N T+KINEGKEE EKSERWFKRVAELHNVTDL SAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPA +
Subjt:  EPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR

A0A6J1I6Q5 zinc finger protein VAR3, chloroplastic

3.3e-163

59.56

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Query:  PSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL----------------------------------------
        P +  L  SF  I ASRHVHSQVST GD+ G+ E SGS  G FS DS  W+EWSKFL SL                                        
Subjt:  PSSSNLISSFHPISASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESL----------------------------------------

Query:  -----------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTF------------------LPKVTCTVEICNPD
                   E L  SV   L       + + ++     E QVLDSDKARTIDLFKFILSYARNPT                   L    C +   NPD
Subjt:  -----------EALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTF------------------LPKVTCTVEICNPD

Query:  PKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPRA------------------------------------------------------PSLSNININ
        PKLLET NQFSDKY QSRGPYGPKVEMKRGDWICPR                                                       PSLSNININ
Subjt:  PKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPRA------------------------------------------------------PSLSNININ

Query:  SGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKL
        SGLGND GS   KVDIDSKLAANEEKAQRWFSKISQLD TSD G+SITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGND VPENN S+L
Subjt:  SGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKL

Query:  AGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSN
        + + NSLDKT S   DDILGR SSNSQSTN GNEQG   NY  SSSSGS QYES KG +SSYVPFVPL PDMFAKKPKNSSME+E+  +D NKS+ SGSN
Subjt:  AGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSN

Query:  EPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR
        E  GS S SN  NEVGDIP     P N  +KINEGKEE EKSERWFKRVAELHNVTDL SAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPA +
Subjt:  EPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIR

SwissProt top hits

e value

%identity

Alignment

Q8S9K3 Zinc finger protein VAR3, chloroplastic

6.1e-58

33.5

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Query:  PRLSLPQLLPTFSLLFLASPHQRLPSSSNLISSFH--PISASRHVHSQVSTVG--DDCGSLEASGSGYGAFSPDS---------CTWQEWSKFLESLEAL
        P +SLP L+PTF +    + HQ   S+++ + S+H   +     +   +S  G   D GS+    S +    PD             +E  + LE L   
Subjt:  PRLSLPQLLPTFSLLFLASPHQRLPSSSNLISSFH--PISASRHVHSQVSTVG--DDCGSLEASGSGYGAFSPDS---------CTWQEWSKFLESLEAL

Query:  ATSV----ARILRVKTGMLIEEDEIVFTSSEIQ----VLDSDKARTIDLFKFILSYA------------------RNPTFLPKVTCTVEICNPDPKLLET
           V     +    KTG    +   ++  S +Q    ++D +KA T+DL + ILSY                    +   L      + +  P+  + +T
Subjt:  ATSV----ARILRVKTGMLIEEDEIVFTSSEIQ----VLDSDKARTIDLFKFILSYA------------------RNPTFLPKVTCTVEICNPDPKLLET

Query:  V-NQFSDKYGQSRGPYGPKVEMKRGDWICPRAPSLS---NINI------------------------------------------NSGLGNDKGSHATKV
        + NQ+SD+ GQ    +   VEMKRGDWIC R   ++   N+                                            +S L +    +++  
Subjt:  V-NQFSDKYGQSRGPYGPKVEMKRGDWICPRAPSLS---NINI------------------------------------------NSGLGNDKGSHATKV

Query:  DIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGANNSLDKTISQS
        +++ +L  NE+KAQRW SK++Q    SD  +  TDEDFPEIMPLRKGVNR+VVSTRK PLERRLAN + R       V  + +SK +  +N+L    ++S
Subjt:  DIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGANNSLDKTISQS

Query:  LDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSD-VNKSVSSGSNEPIGSASHSNDSN
        L++ILG +SS +  ++               +  S ++ES +G N+ +VPFVPLP DMFAKKPK    E++IG+ D +     SG N+ +     S D+N
Subjt:  LDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSD-VNKSVSSGSNEPIGSASHSNDSN

Query:  EVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIRGVQPWSKLAVPTCP
          G           +T+++ +   ++E+  RWFKRV ELHNV+DL SAI  E  PE MPMRKGENRFVVS+KKDRSLTSPA +  +P     VP  P
Subjt:  EVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIRGVQPWSKLAVPTCP

Arabidopsis top hits

e value

%identity

Alignment

AT5G17790.1 zinc finger (Ran-binding) family protein

4.3e-59

33.5

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Query:  PRLSLPQLLPTFSLLFLASPHQRLPSSSNLISSFH--PISASRHVHSQVSTVG--DDCGSLEASGSGYGAFSPDS---------CTWQEWSKFLESLEAL
        P +SLP L+PTF +    + HQ   S+++ + S+H   +     +   +S  G   D GS+    S +    PD             +E  + LE L   
Subjt:  PRLSLPQLLPTFSLLFLASPHQRLPSSSNLISSFH--PISASRHVHSQVSTVG--DDCGSLEASGSGYGAFSPDS---------CTWQEWSKFLESLEAL

Query:  ATSV----ARILRVKTGMLIEEDEIVFTSSEIQ----VLDSDKARTIDLFKFILSYA------------------RNPTFLPKVTCTVEICNPDPKLLET
           V     +    KTG    +   ++  S +Q    ++D +KA T+DL + ILSY                    +   L      + +  P+  + +T
Subjt:  ATSV----ARILRVKTGMLIEEDEIVFTSSEIQ----VLDSDKARTIDLFKFILSYA------------------RNPTFLPKVTCTVEICNPDPKLLET

Query:  V-NQFSDKYGQSRGPYGPKVEMKRGDWICPRAPSLS---NINI------------------------------------------NSGLGNDKGSHATKV
        + NQ+SD+ GQ    +   VEMKRGDWIC R   ++   N+                                            +S L +    +++  
Subjt:  V-NQFSDKYGQSRGPYGPKVEMKRGDWICPRAPSLS---NINI------------------------------------------NSGLGNDKGSHATKV

Query:  DIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGANNSLDKTISQS
        +++ +L  NE+KAQRW SK++Q    SD  +  TDEDFPEIMPLRKGVNR+VVSTRK PLERRLAN + R       V  + +SK +  +N+L    ++S
Subjt:  DIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGANNSLDKTISQS

Query:  LDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSD-VNKSVSSGSNEPIGSASHSNDSN
        L++ILG +SS +  ++               +  S ++ES +G N+ +VPFVPLP DMFAKKPK    E++IG+ D +     SG N+ +     S D+N
Subjt:  LDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVPLPPDMFAKKPKNSSMESEIGVSD-VNKSVSSGSNEPIGSASHSNDSN

Query:  EVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIRGVQPWSKLAVPTCP
          G           +T+++ +   ++E+  RWFKRV ELHNV+DL SAI  E  PE MPMRKGENRFVVS+KKDRSLTSPA +  +P     VP  P
Subjt:  EVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAIRGVQPWSKLAVPTCP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTAGAGAAAGAAGCTCATCTTTTCATCGTCTATGGCAGTGAGCCATCCGCCGCACGGCCGCGAAATGCCACTCGAGCAGCTGCAAGCGTAGGGTTTAACTCGATTCC
ACTCACCACCGCCTCTCTCCGCCACAATGGGCGGAGCCACCAGGTTCTTCGTCCTACTCTCCGGTCCTCTACCTCTCATTCCCCACCGCCGCCCTTCCTTTCTCCGCCTC
GCCTCTCATTACCACAACTTCTTCCGACCTTCTCTCTCCTTTTCCTCGCTTCACCCCACCAACGTCTGCCTTCTTCCTCCAATCTCATCTCTTCCTTTCACCCAATTTCC
GCCTCTCGCCACGTCCATTCTCAGGTCTCCACTGTAGGGGACGATTGTGGGAGTTTGGAAGCCTCGGGGTCCGGCTATGGCGCGTTTTCTCCGGATTCGTGTACTTGGCA
AGAATGGTCGAAGTTCCTCGAGAGTCTCGAGGCGCTGGCTACTTCGGTCGCCAGGATTCTGAGAGTGAAGACGGGGATGCTCATTGAGGAAGATGAAATTGTTTTTACGA
GCAGCGAAATTCAGGTTTTGGATTCTGATAAAGCACGGACAATTGATTTATTCAAATTCATCTTGAGCTATGCAAGGAACCCGACGTTTCTTCCGAAAGTAACCTGTACA
GTAGAGATCTGCAACCCAGATCCGAAGCTTTTGGAGACGGTCAATCAGTTTTCTGACAAATATGGGCAATCACGAGGGCCTTATGGGCCAAAAGTTGAAATGAAAAGAGG
TGACTGGATTTGTCCAAGGGCTCCATCTCTTAGTAACATTAACATAAATTCTGGCTTAGGGAATGACAAAGGAAGTCATGCAACTAAGGTTGACATCGATAGTAAGTTGG
CTGCGAATGAAGAGAAGGCACAACGATGGTTTAGTAAGATTTCTCAGCTGGACTGTACGTCTGATCCGGGCACCTCAATAACAGACGAAGATTTCCCTGAAATAATGCCA
TTGAGAAAAGGAGTCAACAGATTTGTCGTGAGTACAAGGAAGACTCCTCTGGAGAGGAGGTTGGCTAATGCTCAATACAGAAGAAACTTAGGCAACGATGATGTTCCAGA
AAACAATAGCAGTAAACTTGCCGGTGCTAATAATTCTCTTGACAAAACAATAAGCCAAAGTTTGGATGACATTCTTGGTCGCACATCCTCAAATTCTCAATCCACGAATG
TTGGAAATGAACAAGGTACTGGTATCAATTATGGTTCATCATCCAGTTCAGGTTCTTTGCAGTACGAATCCTTGAAAGGAAGTAATTCCAGTTATGTTCCATTTGTTCCA
TTACCTCCAGATATGTTTGCGAAAAAACCCAAGAATTCAAGCATGGAGAGTGAGATAGGTGTTAGTGATGTTAACAAATCTGTTTCATCAGGCTCAAATGAGCCGATAGG
TAGTGCTTCTCACAGCAATGATTCGAATGAAGTAGGAGATATTCCACATACTGTGGAGAAGCCGCTGAACCAGACTGAGAAAATTAATGAAGGAAAGGAGGAAGCTGAAA
AATCTGAGAGATGGTTTAAAAGGGTTGCGGAGCTGCACAATGTGACAGATCTTGCTAGTGCAATTTCTGATGAAGACTTCCCTGAGATCATGCCAATGCGCAAGGGAGAA
AACAGATTTGTAGTTAGTAAAAAGAAAGACCGCTCTTTAACGTCTCCAGCTATAAGAGGCGTGCAGCCATGGAGCAAGCTGGCAGTTCCAACTTGTCCCCTTTGTTCCCT
TCCCACCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVEKEAHLFIVYGSEPSAARPRNATRAAASVGFNSIPLTTASLRHNGRSHQVLRPTLRSSTSHSPPPPFLSPPRLSLPQLLPTFSLLFLASPHQRLPSSSNLISSFHPIS
ASRHVHSQVSTVGDDCGSLEASGSGYGAFSPDSCTWQEWSKFLESLEALATSVARILRVKTGMLIEEDEIVFTSSEIQVLDSDKARTIDLFKFILSYARNPTFLPKVTCT
VEICNPDPKLLETVNQFSDKYGQSRGPYGPKVEMKRGDWICPRAPSLSNININSGLGNDKGSHATKVDIDSKLAANEEKAQRWFSKISQLDCTSDPGTSITDEDFPEIMP
LRKGVNRFVVSTRKTPLERRLANAQYRRNLGNDDVPENNSSKLAGANNSLDKTISQSLDDILGRTSSNSQSTNVGNEQGTGINYGSSSSSGSLQYESLKGSNSSYVPFVP
LPPDMFAKKPKNSSMESEIGVSDVNKSVSSGSNEPIGSASHSNDSNEVGDIPHTVEKPLNQTEKINEGKEEAEKSERWFKRVAELHNVTDLASAISDEDFPEIMPMRKGE
NRFVVSKKKDRSLTSPAIRGVQPWSKLAVPTCPLCSLPT

Sgr028426 (gene) of Monk fruit (Qingpiguo) v1 genome