CuGenDBv2

Gene ID	Sgr028520
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	DNA polymerase epsilon catalytic subunit A, putative
Genome location	tig00153204:1890123..1890760
RNA-Seq Expression	Sgr028520
Synteny	Sgr028520
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004152691.1 uncharacterized protein LOC101215562 [Cucumis sativus]

2.6e-46

71.62

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTA-KADF--------------R
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLE+EHLRA+S+PVD   D ETVG+DYKRSSSFPPA +  A +A F              +
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTA-KADF--------------R

Query:  RAMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA
           WTRSNSAFLNEPPVLDGA+KA  S YGVA+VAS KLNHS NGVGA
Subjt:  RAMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA

XP_008444729.1 PREDICTED: uncharacterized protein LOC103487979 [Cucumis melo]

3.4e-46

71.43

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR
        MGSLM GW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAIS+PVDR+ DRE VGIDYKRSSSFPPA +   ++ F              + 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR

Query:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA
          WTRSNSAFLNEPPVLDGA+KA  S YGVA+VAS KLNH +NGVGA
Subjt:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA

XP_022144322.1 uncharacterized protein LOC111014033 [Momordica charantia]

2.8e-48

76.35

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTA------KADFRRA-------
        MGSLMAGWNSPV DPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVD HVDR+ VGIDYKRSSSFPP ANGTA      ++DF R        
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTA------KADFRRA-------

Query:  --MWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA
           WTRSNSAFLNEPPVLDGAAKAYA        ASFKLNHS NG+GA
Subjt:  --MWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA

XP_023002545.1 uncharacterized protein LOC111496358 [Cucurbita maxima]

9.2e-44

73.53

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VDR+TVGIDYKRSSSFP A     K  F              + 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR

Query:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASF
          W RSNSAFLNEPPVLDGAAKAYASQYGV +VASF
Subjt:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASF

XP_038886573.1 uncharacterized protein LOC120076743 [Benincasa hispida]

7.8e-51

74.15

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR
        MGSLM+GWNSPVLDPKSVKFKRNRSLTK+EIEAYW+SK+K EEEHLRAISMPVDR++DRETVGIDYKRSSSFPPA + +A+A+F              + 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR

Query:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA
          WTRSNSAFLNEPPVLDGA K YAS YGVA+VAS KLNHS NGVG+
Subjt:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LRI3 Uncharacterized protein

1.3e-46

71.62

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTA-KADF--------------R
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLE+EHLRA+S+PVD   D ETVG+DYKRSSSFPPA +  A +A F              +
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTA-KADF--------------R

Query:  RAMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA
           WTRSNSAFLNEPPVLDGA+KA  S YGVA+VAS KLNHS NGVGA
Subjt:  RAMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA

A0A1S3BBS7 uncharacterized protein LOC103487979

1.6e-46

71.43

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR
        MGSLM GW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAIS+PVDR+ DRE VGIDYKRSSSFPPA +   ++ F              + 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR

Query:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA
          WTRSNSAFLNEPPVLDGA+KA  S YGVA+VAS KLNH +NGVGA
Subjt:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA

A0A5A7VD66 Putative DNA polymerase epsilon catalytic subunit A

1.6e-46

71.43

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR
        MGSLM GW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAIS+PVDR+ DRE VGIDYKRSSSFPPA +   ++ F              + 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR

Query:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA
          WTRSNSAFLNEPPVLDGA+KA  S YGVA+VAS KLNH +NGVGA
Subjt:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA

A0A6J1CTD0 uncharacterized protein LOC111014033

1.3e-48

76.35

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTA------KADFRRA-------
        MGSLMAGWNSPV DPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVD HVDR+ VGIDYKRSSSFPP ANGTA      ++DF R        
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTA------KADFRRA-------

Query:  --MWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA
           WTRSNSAFLNEPPVLDGAAKAYA        ASFKLNHS NG+GA
Subjt:  --MWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASFKLNHSDNGVGA

A0A6J1KP90 uncharacterized protein LOC111496358

4.5e-44

73.53

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VDR+TVGIDYKRSSSFP A     K  F              + 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADF--------------RR

Query:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASF
          W RSNSAFLNEPPVLDGAAKAYASQYGV +VASF
Subjt:  AMWTRSNSAFLNEPPVLDGAAKAYASQYGVANVASF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G19530.1 unknown protein

1.3e-14

40.5

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRK-LEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADFRRAMWTRSNSAFLNE
        MGSLM+GW+S V DPKSV  +R +SLT+EEI+ +W++K+K  EEEH++A S    + V +E      K   S        +K+      W ++  AFLNE
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRK-LEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADFRRAMWTRSNSAFLNE

Query:  PPVLDGAAKAYASQYGVANVA
        P   +G    Y SQ+ VA++A
Subjt:  PPVLDGAAKAYASQYGVANVA

Sequences

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CDS sequence

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ATGGGTTCTCTAATGGCCGGATGGAACTCTCCCGTTCTCGATCCTAAATCAGTGAAGTTCAAGAGAAATCGGTCGCTTACGAAGGAGGAAATCGAAGCTTACTGGAGATC
GAAGAGGAAGTTGGAGGAAGAACATCTCAGAGCCATTTCTATGCCGGTGGATCGTCATGTTGATCGCGAGACGGTCGGAATAGACTACAAAAGATCGAGTTCGTTTCCGC
CGGCGGCGAACGGTACGGCGAAAGCAGATTTTCGGAGAGCGATGTGGACGAGGAGCAACTCGGCTTTTCTGAATGAACCGCCGGTCCTCGACGGCGCTGCCAAAGCTTAC
GCGTCGCAGTACGGCGTCGCGAACGTGGCCTCGTTCAAGTTGAATCACAGCGATAATGGAGTCGGTGCTTGA

mRNA sequence

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Protein sequence

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MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRHVDRETVGIDYKRSSSFPPAANGTAKADFRRAMWTRSNSAFLNEPPVLDGAAKAY
ASQYGVANVASFKLNHSDNGVGA

Sgr028520 (gene) of Monk fruit (Qingpiguo) v1 genome