; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr029236 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr029236
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionNup54 domain-containing protein
Genome locationtig00153210:4357876..4361755
RNA-Seq ExpressionSgr029236
SyntenySgr029236
Gene Ontology termsGO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0036228 - protein localization to nuclear inner membrane (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR024864 - Nucleoporin Nup54/Nup57/Nup44
IPR025712 - Nucleoporin Nup54, alpha-helical domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135312.1 nuclear pore complex protein NUP54 [Cucumis sativus]9.4e-18289.51Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA
        MFGAQPSSS         AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP   QQQQQ QQ+P+F Q +
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA

Query:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE
        ATGFGFQTPF+APQS+PFPN QLTTQMAPVAPLPFSLADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+R K  GVSDIMWAEA+AKLEGMESADRE
Subjt:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE

Query:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI
        RLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALI
Subjt:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI

Query:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS
        TRQLKG GAELSRRVQNLLT+TRGQANG+  GNS Y QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMA DK+M  DAS
Subjt:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS

XP_008446043.1 PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo]6.1e-18189.77Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA
        MFGAQ SSS         AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP   QQQQQ QQ+ LF Q +
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA

Query:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE
        ATGFGFQTPF+APQS+PFPN QLTTQMAPVAPLPFSLADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAK  GVSDIMWAEA+AKLEGMESADRE
Subjt:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE

Query:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI
        RLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALI
Subjt:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI

Query:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS
        TRQLKG GAELS+RVQNLLTITRGQANG+  GNS YLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMA DK+M  DAS
Subjt:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS

XP_022151739.1 nuclear pore complex protein NUP54 [Momordica charantia]5.7e-18793.19Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPAATGFGFQTP
        MFGAQPSSSAFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPSTS+F TGFGSSLFSTPFSSQP   QQ QQQQQ+PLFQQP ATGFGFQTP
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPAATGFGFQTP

Query:  FSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQG
        F+APQS+PFPN QLTTQMAPVAPLPFS+ADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAK AGVSDIMWAEA+ KLEGMESADRERLWPQLVQG
Subjt:  FSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQG

Query:  FKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPGA
        FKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKG GA
Subjt:  FKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPGA

Query:  ELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS
        ELSRRVQNLLT TRGQANG+++GNS YLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMA DK+MT DAS
Subjt:  ELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS

XP_023542822.1 nuclear pore complex protein NUP54 [Cucurbita pepo subsp. pepo]4.3e-17989.3Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP--LQQQQQQQQQQTPLFQQPAATGFGFQT
        FG   S+ AFGTPQSTPAFGTPASTPAFGTPSASPAFGN SSTPAFGTPS+SSFATGFGSSLFSTPFSSQP   QQQQQQQQQQ+PLFQ PAATGFGFQT
Subjt:  FGAQPSSSAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP--LQQQQQQQQQQTPLFQQPAATGFGFQT

Query:  PFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQ
        PF+APQSSPFPN QLTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFK LLFSVTDPQ+RAK AGVSDIMWAEA+AKLEGMESADRERLWPQLVQ
Subjt:  PFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQ

Query:  GFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPG
        GFKDLSQRLKIQDEVILSDAERLRMTQSNVK LQRHFLADTLPW+QRL+QKEQGLQRRLLR+MR+VEALESKGCRVP+M GEAELAEKLALITRQL+G G
Subjt:  GFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPG

Query:  AELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS
        AELSRRV+NLLTIT GQANG+ AGNS YLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMA DK+M  D S
Subjt:  AELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS

XP_038893426.1 nuclear pore complex protein NUP54 [Benincasa hispida]3.1e-18591.3Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA
        MFGAQPSSS         AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP   Q QQQ QQ+PLF QPA
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA

Query:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE
        ATGFGFQTPF+APQS+PFPN QLTTQMAPVAPLPFSLADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+R K AGVSDIMWAEA+AKLEGMESADRE
Subjt:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE

Query:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI
        RLWPQLVQGFKDLSQRLKIQDEVILSD++RLRMTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI
Subjt:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI

Query:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS
        TRQLKG GAELSRRVQNLLTITRGQANG+SAGNS YLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMA D++MT DAS
Subjt:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPW8 Nup54 domain-containing protein4.5e-18289.51Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA
        MFGAQPSSS         AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP   QQQQQ QQ+P+F Q +
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA

Query:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE
        ATGFGFQTPF+APQS+PFPN QLTTQMAPVAPLPFSLADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+R K  GVSDIMWAEA+AKLEGMESADRE
Subjt:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE

Query:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI
        RLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALI
Subjt:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI

Query:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS
        TRQLKG GAELSRRVQNLLT+TRGQANG+  GNS Y QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMA DK+M  DAS
Subjt:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS

A0A1S3BE47 nuclear pore complex protein NUP542.9e-18189.77Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA
        MFGAQ SSS         AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP   QQQQQ QQ+ LF Q +
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA

Query:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE
        ATGFGFQTPF+APQS+PFPN QLTTQMAPVAPLPFSLADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAK  GVSDIMWAEA+AKLEGMESADRE
Subjt:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE

Query:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI
        RLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALI
Subjt:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI

Query:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS
        TRQLKG GAELS+RVQNLLTITRGQANG+  GNS YLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMA DK+M  DAS
Subjt:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS

A0A5A7SSX4 Nuclear pore complex protein NUP542.9e-18189.77Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA
        MFGAQ SSS         AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQP   QQQQQ QQ+ LF Q +
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPA

Query:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE
        ATGFGFQTPF+APQS+PFPN QLTTQMAPVAPLPFSLADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAK  GVSDIMWAEA+AKLEGMESADRE
Subjt:  ATGFGFQTPFSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRE

Query:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI
        RLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALI
Subjt:  RLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALI

Query:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS
        TRQLKG GAELS+RVQNLLTITRGQANG+  GNS YLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMA DK+M  DAS
Subjt:  TRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS

A0A6J1DDY9 nuclear pore complex protein NUP542.7e-18793.19Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPAATGFGFQTP
        MFGAQPSSSAFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPSTS+F TGFGSSLFSTPFSSQP   QQ QQQQQ+PLFQQP ATGFGFQTP
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPAATGFGFQTP

Query:  FSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQG
        F+APQS+PFPN QLTTQMAPVAPLPFS+ADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAK AGVSDIMWAEA+ KLEGMESADRERLWPQLVQG
Subjt:  FSAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQG

Query:  FKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPGA
        FKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKG GA
Subjt:  FKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPGA

Query:  ELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS
        ELSRRVQNLLT TRGQANG+++GNS YLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMA DK+MT DAS
Subjt:  ELSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS

A0A6J1G105 nuclear pore complex protein NUP541.7e-17688.19Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPAATGFGFQTPF
        FG   S+ AFGTPQSTPAFGTP STPAFGTPSASPAFGN SSTPAFGTPS+SSFATGFGSSLFSTPFSSQP     QQQQQQ+PLFQ PAATGFGFQTPF
Subjt:  FGAQPSSSAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPAATGFGFQTPF

Query:  SAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQGF
        +APQSSPFPN QLTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFK LLFSVTDPQ+RAK AGVSDIMWAEA+AKLEGMESADRERLWPQLVQGF
Subjt:  SAPQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQGF

Query:  KDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPGAE
        KDLSQRLKIQDEVILSDAERLRMTQSNVK LQRHFLADTLPW+QRL+QKEQGLQRRLLR+MR+VEALESKGCRVP+M GEAELAE+LALITRQL+G GAE
Subjt:  KDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPGAE

Query:  LSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS
        LSRRV+NLLTIT GQANG+ AGNS YLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMA DK+M  D S
Subjt:  LSRRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS

SwissProt top hitse value%identityAlignment
P70582 Nuclear pore complex protein Nup543.2e-0725.98Show/hide
Query:  AGVSDIMWAEALAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEA
        AGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    T+  + + ++K   L  R L+V+   E 
Subjt:  AGVSDIMWAEALAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEA

Query:  LESKGCRVPVMKGEAELAEKLALITRQLKGPGAELSRRVQNLLTITRGQAN-GTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD
            G    +   E +L  +L  I  +L  P  +   R+  L++  R Q + G       Y      I    L ++++ L+QQ E ++ L +++K D+ D
Subjt:  LESKGCRVPVMKGEAELAEKLALITRQLKGPGAELSRRVQNLLTITRGQAN-GTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD

Query:  MEII
        ++++
Subjt:  MEII

Q7Z3B4 Nucleoporin p549.2e-0725.49Show/hide
Query:  AGVSDIMWAEALAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEA
        AGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    ++  + + ++K   L  R L+V+   E 
Subjt:  AGVSDIMWAEALAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEA

Query:  LESKGCRVPVMKGEAELAEKLALITRQLKGPGAELSRRVQNLLTITRGQAN-GTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD
            G    +   E +L  +L  I  +L  P  +   R+  L++  R Q + G       Y      I    L ++++ L+QQ E ++ L +++K D+ D
Subjt:  LESKGCRVPVMKGEAELAEKLALITRQLKGPGAELSRRVQNLLTITRGQAN-GTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD

Query:  MEII
        ++++
Subjt:  MEII

Q8BTS4 Nuclear pore complex protein Nup543.2e-0725.98Show/hide
Query:  AGVSDIMWAEALAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEA
        AGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    T+  + + ++K   L  R L+V+   E 
Subjt:  AGVSDIMWAEALAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEA

Query:  LESKGCRVPVMKGEAELAEKLALITRQLKGPGAELSRRVQNLLTITRGQAN-GTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD
            G    +   E +L  +L  I  +L  P  +   R+  L++  R Q + G       Y      I    L ++++ L+QQ E ++ L +++K D+ D
Subjt:  LESKGCRVPVMKGEAELAEKLALITRQLKGPGAELSRRVQNLLTITRGQAN-GTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD

Query:  MEII
        ++++
Subjt:  MEII

Q8GYF7 Nuclear pore complex protein NUP541.1e-14071.43Show/hide
Query:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPLQQQQQQQQQQTP--LFQQPAATGFGFQTPFS----A
        FGTP S+P+FGTP+STPAFGT  +SPAFG  S+TPAFGTPS  SF++ GFGSSLFS+PFSSQ  QQQQQQQQQQ P  LFQQ  ++ FGFQ+PF+     
Subjt:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPLQQQQQQQQQQTP--LFQQPAATGFGFQTPFS----A

Query:  PQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQGFKD
         Q +PFPN QLTTQMAPVAP+P+SLADRD+QAI+EAYK++  NPKYAF+HLLFSVT+PQ+R K A VSDIMWAEA++KLEGM+S +RERLWPQLVQGFKD
Subjt:  PQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RLRQKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KGPGAELS
Subjt:  LSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPGAELS

Query:  RRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADA
        RRVQ+L TI+R QAN  +AG+S YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++A D +M  D+
Subjt:  RRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADA

Q9VDV3 Nuclear pore complex protein Nup581.2e-0640.31Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPAATGFGFQTP-
        FG   ++ AFG P +T AFG PA+TPAFG  +A+PAFG  ++TPAFG P+ +S    FG+   +T F + P   Q        P     A T F F TP 
Subjt:  FGAQPSSSAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPAATGFGFQTP-

Query:  FSAPQSSPFPNTQLTTQMAPVAPLPFSLA
         SAP ++P      TT     A +P SL+
Subjt:  FSAPQSSPFPNTQLTTQMAPVAPLPFSLA

Arabidopsis top hitse value%identityAlignment
AT1G24310.1 unknown protein7.7e-14271.43Show/hide
Query:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPLQQQQQQQQQQTP--LFQQPAATGFGFQTPFS----A
        FGTP S+P+FGTP+STPAFGT  +SPAFG  S+TPAFGTPS  SF++ GFGSSLFS+PFSSQ  QQQQQQQQQQ P  LFQQ  ++ FGFQ+PF+     
Subjt:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPLQQQQQQQQQQTP--LFQQPAATGFGFQTPFS----A

Query:  PQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQGFKD
         Q +PFPN QLTTQMAPVAP+P+SLADRD+QAI+EAYK++  NPKYAF+HLLFSVT+PQ+R K A VSDIMWAEA++KLEGM+S +RERLWPQLVQGFKD
Subjt:  PQSSPFPNTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RLRQKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KGPGAELS
Subjt:  LSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPGAELS

Query:  RRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADA
        RRVQ+L TI+R QAN  +AG+S YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++A D +M  D+
Subjt:  RRVQNLLTITRGQANGTSAGNSTYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGAGCTCAACCATCCTCCTCCGCCTTCGGCACTCCACAATCGACTCCTGCCTTTGGCACGCCGGCATCCACTCCTGCCTTCGGAACTCCGTCGGCGTCCCCCGC
ATTTGGAAACCTTTCCTCAACTCCTGCCTTCGGAACTCCGTCTACGTCGTCTTTTGCCACCGGCTTCGGATCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTTAC
AACAGCAACAGCAACAGCAACAGCAGCAAACGCCGCTGTTTCAGCAACCAGCTGCCACAGGATTCGGTTTCCAGACTCCGTTTTCAGCGCCTCAGTCCAGTCCCTTTCCA
AATACTCAATTGACCACTCAGATGGCTCCGGTGGCTCCGCTTCCTTTCTCCCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGAGGCAGGAAACCC
TAAGTATGCGTTTAAGCATTTATTGTTCAGTGTAACTGATCCTCAATTTAGGGCGAAGGCTGCTGGTGTATCAGATATAATGTGGGCTGAGGCACTGGCAAAGCTTGAAG
GCATGGAAAGCGCTGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAG
AGGCTGCGGATGACCCAAAGCAATGTCAAAATGCTTCAGAGACATTTTCTAGCTGACACTCTACCTTGGGTCCAAAGATTGCGACAAAAGGAGCAAGGTCTTCAAAGGCG
TCTCTTGAGAGTTATGAGAATTGTGGAGGCACTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCTGAGAAGTTAGCTTTAATAACGAGGC
AGTTGAAAGGACCTGGGGCCGAGCTTTCTAGGAGGGTGCAAAATTTGCTTACAATTACTCGTGGTCAAGCAAATGGCACCAGTGCTGGTAATTCCACCTATCTTCAAGGA
TCAGCAAAAATACACGAACAGAGCCTTGCGGATATGCAGGAGGTTTTGCAGCAGCAGACTGAGGCCATTGCTAGACTTGGAAATGTTTTAAAGCGGGATGTTAGAGACAT
GGAAATCATAATGGCGGTAGACAAAGATATGACGGCTGATGCGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGGAGCTCAACCATCCTCCTCCGCCTTCGGCACTCCACAATCGACTCCTGCCTTTGGCACGCCGGCATCCACTCCTGCCTTCGGAACTCCGTCGGCGTCCCCCGC
ATTTGGAAACCTTTCCTCAACTCCTGCCTTCGGAACTCCGTCTACGTCGTCTTTTGCCACCGGCTTCGGATCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTTAC
AACAGCAACAGCAACAGCAACAGCAGCAAACGCCGCTGTTTCAGCAACCAGCTGCCACAGGATTCGGTTTCCAGACTCCGTTTTCAGCGCCTCAGTCCAGTCCCTTTCCA
AATACTCAATTGACCACTCAGATGGCTCCGGTGGCTCCGCTTCCTTTCTCCCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGAGGCAGGAAACCC
TAAGTATGCGTTTAAGCATTTATTGTTCAGTGTAACTGATCCTCAATTTAGGGCGAAGGCTGCTGGTGTATCAGATATAATGTGGGCTGAGGCACTGGCAAAGCTTGAAG
GCATGGAAAGCGCTGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAG
AGGCTGCGGATGACCCAAAGCAATGTCAAAATGCTTCAGAGACATTTTCTAGCTGACACTCTACCTTGGGTCCAAAGATTGCGACAAAAGGAGCAAGGTCTTCAAAGGCG
TCTCTTGAGAGTTATGAGAATTGTGGAGGCACTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCTGAGAAGTTAGCTTTAATAACGAGGC
AGTTGAAAGGACCTGGGGCCGAGCTTTCTAGGAGGGTGCAAAATTTGCTTACAATTACTCGTGGTCAAGCAAATGGCACCAGTGCTGGTAATTCCACCTATCTTCAAGGA
TCAGCAAAAATACACGAACAGAGCCTTGCGGATATGCAGGAGGTTTTGCAGCAGCAGACTGAGGCCATTGCTAGACTTGGAAATGTTTTAAAGCGGGATGTTAGAGACAT
GGAAATCATAATGGCGGTAGACAAAGATATGACGGCTGATGCGAGTTAA
Protein sequenceShow/hide protein sequence
MFGAQPSSSAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQQQTPLFQQPAATGFGFQTPFSAPQSSPFP
NTQLTTQMAPVAPLPFSLADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKAAGVSDIMWAEALAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAE
RLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGPGAELSRRVQNLLTITRGQANGTSAGNSTYLQG
SAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAVDKDMTADAS