| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008446018.1 PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo] | 6.5e-184 | 89.77 | Show/hide |
Query: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPSEGENALATVGPRPMEWSTVPY PQGPGPNGKQ+ +FNP GNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Subjt: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
LHWT DGS +V+ASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI TGGID
Subjt: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
Query: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
ND+KVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVYIWDT
Subjt: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIV SCSSD+QIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| XP_022151978.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Momordica charantia] | 1.1e-186 | 89.86 | Show/hide |
Query: MQVVPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
MQVVPSEG NALATVGPRPMEWSTVPY+APQGPGPNGKQ+ +FNPAG+VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
Subjt: MQVVPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
Query: VLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTG
VLDLHWTTDG +VTASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI TG
Subjt: VLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTG
Query: GIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYI
GIDND+KVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVY+
Subjt: GIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYI
Query: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSD+QIYLGEI
Subjt: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| XP_022945717.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita moschata] | 1.5e-185 | 90.06 | Show/hide |
Query: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPS GENALATVGPRPMEWSTVPY APQGPGPNGKQ+ +FNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLD
Subjt: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
LHWTTDGS +V+ASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI TGGID
Subjt: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
Query: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
ND+KVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVY+WDT
Subjt: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSD+QIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| XP_022966914.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita maxima] | 1.5e-185 | 90.06 | Show/hide |
Query: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPS GENALATVGPRPMEWSTVPY APQGPGPNGKQ+ +FNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLD
Subjt: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
LHWTTDGS +V+ASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI TGGID
Subjt: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
Query: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
ND+KVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVY+WDT
Subjt: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSD+QIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| XP_023542336.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita pepo subsp. pepo] | 4.5e-185 | 89.77 | Show/hide |
Query: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPS GENALATVGPRPMEWSTVPY APQGPGPNGKQ+ +FNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLD
Subjt: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
LHWTTDGS +V+ASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI TGGID
Subjt: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
Query: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
ND+KVWDLRKGEVM+TLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVY+WDT
Subjt: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSD+QIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BDK5 U5 small nuclear ribonucleoprotein 40 kDa protein | 3.2e-184 | 89.77 | Show/hide |
Query: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPSEGENALATVGPRPMEWSTVPY PQGPGPNGKQ+ +FNP GNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Subjt: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
LHWT DGS +V+ASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI TGGID
Subjt: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
Query: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
ND+KVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVYIWDT
Subjt: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIV SCSSD+QIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| A0A5A7SYI1 U5 small nuclear ribonucleoprotein 40 kDa protein | 3.2e-184 | 89.77 | Show/hide |
Query: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPSEGENALATVGPRPMEWSTVPY PQGPGPNGKQ+ +FNP GNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Subjt: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
LHWT DGS +V+ASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI TGGID
Subjt: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
Query: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
ND+KVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVYIWDT
Subjt: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIV SCSSD+QIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| A0A6J1DDM1 U5 small nuclear ribonucleoprotein 40 kDa protein | 5.2e-187 | 89.86 | Show/hide |
Query: MQVVPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
MQVVPSEG NALATVGPRPMEWSTVPY+APQGPGPNGKQ+ +FNPAG+VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
Subjt: MQVVPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
Query: VLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTG
VLDLHWTTDG +VTASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI TG
Subjt: VLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTG
Query: GIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYI
GIDND+KVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVY+
Subjt: GIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYI
Query: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSD+QIYLGEI
Subjt: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| A0A6J1G1Q0 U5 small nuclear ribonucleoprotein 40 kDa protein | 7.5e-186 | 90.06 | Show/hide |
Query: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPS GENALATVGPRPMEWSTVPY APQGPGPNGKQ+ +FNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLD
Subjt: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
LHWTTDGS +V+ASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI TGGID
Subjt: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
Query: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
ND+KVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVY+WDT
Subjt: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSD+QIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| A0A6J1HV60 U5 small nuclear ribonucleoprotein 40 kDa protein | 7.5e-186 | 90.06 | Show/hide |
Query: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPS GENALATVGPRPMEWSTVPY APQGPGPNGKQ+ +FNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLD
Subjt: VPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQR--------------------QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
LHWTTDGS +V+ASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKI TGGID
Subjt: LHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGID
Query: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
ND+KVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVY+WDT
Subjt: NDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSD+QIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| SwissProt top hits | e value | %identity | Alignment |
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| Q2HJH6 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.9e-114 | 60.92 | Show/hide |
Query: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
+F+P G+ +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDGS + +AS DKT+ WD ETG+++K++ H+SFVNSC P RRGP L+ +GSD
Subjt: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
Query: DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR
DGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I++GGIDNDIKVWDLR+ ++ T++GH D +TG+ LS +GSYLL+N MD + +WD+RP+AP+ R
Subjt: DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR
Query: CVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
CV+IF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VY+WDTTSRRILYKLPGH GS+NE FHP EPI+ S SSD+++Y+GEI
Subjt: CVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| Q55AR8 U5 small nuclear ribonucleoprotein 40 kDa protein | 5.9e-103 | 57.54 | Show/hide |
Query: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
+FN G +ASG DKEIFLWNV+G+C N+ VL+GHK +L+LHW+TD + + TA DK++ WD G+ IK++ EHS VNSCCP RRGPPL+ SGSD
Subjt: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
Query: DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGE-VMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQN
D +A+++D R +G+ F KY +T+V FSDASD+++TGGIDN I+VWD+R E + TL HQD IT +S DG+YLL+N MD IWD+RPYAP N
Subjt: DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGE-VMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQN
Query: RCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
R +K F G Q+NFEKNL+K SWS DG ++ GSSDR VYIWDT ++++ Y LPGH+G+VNE FHP+EPI+ SCSSD+ IYLGEI
Subjt: RCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| Q5RF51 U5 small nuclear ribonucleoprotein 40 kDa protein | 8.2e-113 | 60.56 | Show/hide |
Query: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
+F+P G+ +AS D+ I LWNV+GDC N+ L+G+ AV++LH+ TDGS + +AS DKT+ WD ETG+++K++ H+SFVNSC P RRGP L+ +GSD
Subjt: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
Query: DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR
DGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I++GGIDNDIKVWDLR+ ++ T++GH D +TG+ LS +GSYLL+N MD + +WD+RP+AP+ R
Subjt: DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR
Query: CVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
CVKIF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR V +WDTTSRRILYKLPGH GS+NE FHP EPI+ S SSD+++Y+GEI
Subjt: CVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| Q6PE01 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.5e-114 | 60.56 | Show/hide |
Query: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
+F+P G+ +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDGS + +AS DKT+ WD ETG+++K++ H+SFVNSC P RRGP L+ +GSD
Subjt: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
Query: DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR
DGT KLWD+R++ A+QTF + YQ+ AV+F+D SD+I++GGIDNDIKVWDLR+ ++ T++GH D +TG+ LS +GSYLL+N MD + +WD+RP+AP+ R
Subjt: DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR
Query: CVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
CVKIF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VY+WDTTSRR+LYKLPGH GS+NE FHP EPI+ S SSD+++Y+GEI
Subjt: CVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| Q96DI7 U5 small nuclear ribonucleoprotein 40 kDa protein | 8.7e-115 | 61.27 | Show/hide |
Query: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
+F+P G+ +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDGS + +AS DKT+ WD ETG+++K++ H+SFVNSC P RRGP L+ +GSD
Subjt: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
Query: DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR
DGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I++GGIDNDIKVWDLR+ ++ T++GH D +TG+ LS +GSYLL+N MD + +WD+RP+AP+ R
Subjt: DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNR
Query: CVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
CVKIF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VY+WDTTSRRILYKLPGH GS+NE FHP EPI+ S SSD+++Y+GEI
Subjt: CVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G10580.1 Transducin/WD40 repeat-like superfamily protein | 2.3e-25 | 24.91 | Show/hide |
Query: RQFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHS-SFVNSCCPTRRGPPLIVSG
R F G+++ S D ++ +W+V+ K GH AV D+ ++ DGS +TA DK ++ WD ETG+ I + +V P ++++G
Subjt: RQFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHS-SFVNSCCPTRRGPPLIVSG
Query: SDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYA
D WD+ Q + + ++F D + + +T D ++VW+ V+ + + H + + + P+G++L +D ++ I+ R
Subjt: SDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYA
Query: PQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPI-VGSCSSD
N+ K F G H + ++SPDG V +G + + WD S ++ L H G +HP E V +C D
Subjt: PQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPI-VGSCSSD
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| AT2G41500.1 WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related | 1.9e-24 | 27.05 | Show/hide |
Query: FNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDD
F+P + +A+ S D+ LW G GH + + + + G ++ T S DKT R WD+ TG ++ HS V + G L S D
Subjt: FNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDD
Query: GTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSP-DGSYLLTNGMDCKLCIWDMRPYAPQN
A++WD+R +I F + + +V+FS + +GG DN ++WDLR + + + H ++++ ++ P +G +L T D K+ IW R ++
Subjt: GTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSP-DGSYLLTNGMDCKLCIWDMRPYAPQN
Query: RCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTT
VK GH E + + D S + S DR + +W ++
Subjt: RCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTT
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| AT2G43770.1 Transducin/WD40 repeat-like superfamily protein | 1.9e-173 | 80.29 | Show/hide |
Query: MQVVPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQ--------------------RQFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
M+++ E E AL+ GPRPMEWSTVP++A QGPGPNGK + +FNPAG +IASGSHD+EIFLW VHGDCKNFMVL+GHKNA
Subjt: MQVVPSEGENALATVGPRPMEWSTVPYTAPQGPGPNGKQQ--------------------RQFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
Query: VLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTG
+LDLHWT+DGS +V+ASPDKT+RAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI+SGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDA+DKI TG
Subjt: VLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKILTG
Query: GIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYI
G+DND+KVWDLRKGE MTL+GHQD ITGM LSPDGSYLLTNGMD KLC+WDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDG+KVTAGSSDRMV+I
Subjt: GIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYI
Query: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
WDTTSRR +YKLPGHTGSVNECVFHP+EPI+GSCSSD+ IYLGEI
Subjt: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQIYLGEI
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| AT3G49660.1 Transducin/WD40 repeat-like superfamily protein | 1.7e-36 | 28.77 | Show/hide |
Query: QFNPAGNVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIV
+F+ G ++AS S DK I + ++ + GH+N + D+ +++D +V+AS DKTL+ WDVETG IK + H+++ C +IV
Subjt: QFNPAGNVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIV
Query: SGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRP
SGS D T ++WD+ ++ P +TAV F+ I++ D ++WD G + TL ++ ++ SP+G ++L +D L +W++
Subjt: SGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRP
Query: YAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQI
+ +K + GH N + + +G ++ +GS D V++W+ S+++L KL GHT +V HP+E ++ S S D+ +
Subjt: YAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQI
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| AT5G64730.1 Transducin/WD40 repeat-like superfamily protein | 1.7e-25 | 26.41 | Show/hide |
Query: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
+FN GN + D+ I LWN H + H V D+H T+D + + D+ + WDV TG+ I+K H VN+ ++VS
Subjt: QFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSHMVTASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSD
Query: DGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPY
D + ++WD R I TF D T +S +I+ G +D ++ +D+R G M G + + +S DG+ +L +D L + D
Subjt: DGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDASDKILTGGIDNDIKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPY
Query: APQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQI
+++++GH K C + + V GS D +V+ WD ++L K H V +HP E + + S D I
Subjt: APQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDRQI
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