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Sgr029528 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr029528
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptiontranscription initiation factor TFIID subunit 13
Genome locationtig00153403:1640569..1654225
RNA-Seq ExpressionSgr029528
SyntenySgr029528
Gene Ontology termsGO:0006366 - transcription by RNA polymerase II (biological process)
GO:0006413 - translational initiation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0009960 - endosperm development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003195 - Transcription initiation factor IID, subunit 13
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK18217.1 transcription initiation factor TFIID subunit 13 [Cucumis melo var. makuwa]1.3e-3693.55Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
        G +  PLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKD RKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDK+D
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD

XP_004136002.1 transcription initiation factor TFIID subunit 13 [Cucumis sativus]1.3e-3693.55Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
        G +  PLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKD RKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDK+D
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD

XP_008451497.1 PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo]1.3e-3693.55Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
        G +  PLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKD RKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDK+D
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD

XP_022144527.1 transcription initiation factor TFIID subunit 13 [Momordica charantia]7.3e-3794.62Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
        G +  PLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKD RKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD

XP_038899215.1 transcription initiation factor TFIID subunit 13-like [Benincasa hispida]3.6e-3692.47Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
        G +  PLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYL+RKD RKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDK+D
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD

TrEMBL top hitse value%identityAlignment
A0A0A0KB69 Uncharacterized protein6.1e-3793.55Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
        G +  PLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKD RKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDK+D
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD

A0A1S3BRL0 transcription initiation factor TFIID subunit 136.1e-3793.55Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
        G +  PLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKD RKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDK+D
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD

A0A5A7TZC2 Transcription initiation factor TFIID subunit 136.1e-3793.55Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
        G +  PLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKD RKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDK+D
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD

A0A5D3D2Q2 Transcription initiation factor TFIID subunit 136.1e-3793.55Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
        G +  PLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKD RKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDK+D
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD

A0A6J1CTQ0 transcription initiation factor TFIID subunit 133.6e-3794.62Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
        G +  PLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKD RKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEEDKLD

SwissProt top hitse value%identityAlignment
P61216 Transcription initiation factor TFIID subunit 131.4e-1447.19Show/hide
Query:  LFSHQFLADQKYSGSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFE
        LFS +        G ++ P  ESV ++ED+V+E+ITE+ +KA  IG ++G++ VED ++L+RKD RK  R  +LL+MNEELK+AR+AF+
Subjt:  LFSHQFLADQKYSGSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFE

Q148M7 Transcription initiation factor TFIID subunit 131.4e-1447.19Show/hide
Query:  LFSHQFLADQKYSGSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFE
        LFS +        G ++ P  ESV ++ED+V+E+ITE+ +KA  IG ++G++ VED ++L+RKD RK  R  +LL+MNEELK+AR+AF+
Subjt:  LFSHQFLADQKYSGSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFE

Q15543 Transcription initiation factor TFIID subunit 131.4e-1447.19Show/hide
Query:  LFSHQFLADQKYSGSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFE
        LFS +        G ++ P  ESV ++ED+V+E+ITE+ +KA  IG ++G++ VED ++L+RKD RK  R  +LL+MNEELK+AR+AF+
Subjt:  LFSHQFLADQKYSGSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFE

Q5R9W6 Transcription initiation factor TFIID subunit 131.4e-1447.19Show/hide
Query:  LFSHQFLADQKYSGSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFE
        LFS +        G ++ P  ESV ++ED+V+E+ITE+ +KA  IG ++G++ VED ++L+RKD RK  R  +LL+MNEELK+AR+AF+
Subjt:  LFSHQFLADQKYSGSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFE

Q6NQH4 Transcription initiation factor TFIID subunit 133.0e-2571.95Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKL
        G E+ PLPESVAL+EDIVVEY+T+L +KAQEIGSKRG+L V+DFLYL+RKD  KLNR  ELL+M EELKQAR+AF++DE +L
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKL

Arabidopsis top hitse value%identityAlignment
AT1G02680.1 TBP-associated factor 132.1e-2671.95Show/hide
Query:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKL
        G E+ PLPESVAL+EDIVVEY+T+L +KAQEIGSKRG+L V+DFLYL+RKD  KLNR  ELL+M EELKQAR+AF++DE +L
Subjt:  GSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTCCTACGAAAGCGCGTGGGTGGACCACCCGCTGCTTCAAAAGTTTCTGGAGCAATCCAAATTGGCCACGTCATGGGGCGCGTGCACATCACAGCTCAGAAAAC
AACACAGATCCCTGACGTGTCCGCAAAATCTACGTTCCTATCTTTCGGCATTACACAGCGTTGGTACGCTTTACACGACTTCTCATTAAGATCATCCCCCGACTCGCCTG
CGACTACAGACAAAAATGAAACTCGCCCGCTCTGGGCCGACGCCTTGCCATCGGAAGTCCTACGTGGCAGGCTTGCGAGCCGTCCGATTTATATGAGACGGCGATTCCAT
GACAAGAATTTTACTGTGTTCTCTCTCTTTAGTCATCAATTCTTAGCAGATCAGAAGTACAGTGGGAGTGAGGAAAAACCCCTTCCAGAGTCTGTAGCACTTATGGAGGA
CATTGTTGTGGAGTACATCACCGAACTTGTGTACAAAGCCCAGGAAATCGGATCAAAAAGGGGAAAGCTGTCAGTAGAAGACTTTTTGTATTTAATGCGCAAGGACTCGC
GCAAACTTAACCGCTCTACCGAACTGTTGTCCATGAACGAAGAGCTGAAACAGGCAAGGAGAGCTTTTGAGATAGATGAAGATAAGCTGAAAAAGGCTTTTGAAGAAGAA
GACAAATTGGATCATTACCAGGGTGATGGTGACAGTGGCGTGCAAGTCATTGCCTTCCCTTCTGAAGACGTCATGTGGTGCAGTGTGGATGCGGAACTGTTAAACATAAA
GATGATACTTCAGCGCGAGCTTCCTATAAGCCCTTTTGATCTGCTCGTCCGACGCACCCCGCGGCACTTGCAGTATATCATAGTAGCTTTTCCTGAATACAAAACAAGAA
AATTTAGCACAAAGCGAGATGAAATAGCCATTGCAGTGAAGCTACAAAGACGACCGGAGTCGTCCCCTGAACTTGGTCGTCGAGTCGATTCCACGAAACAAAATGTGGCC
GAAGCAAACGACTTTCCCAGTCACTACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTTCCTACGAAAGCGCGTGGGTGGACCACCCGCTGCTTCAAAAGTTTCTGGAGCAATCCAAATTGGCCACGTCATGGGGCGCGTGCACATCACAGCTCAGAAAAC
AACACAGATCCCTGACGTGTCCGCAAAATCTACGTTCCTATCTTTCGGCATTACACAGCGTTGGTACGCTTTACACGACTTCTCATTAAGATCATCCCCCGACTCGCCTG
CGACTACAGACAAAAATGAAACTCGCCCGCTCTGGGCCGACGCCTTGCCATCGGAAGTCCTACGTGGCAGGCTTGCGAGCCGTCCGATTTATATGAGACGGCGATTCCAT
GACAAGAATTTTACTGTGTTCTCTCTCTTTAGTCATCAATTCTTAGCAGATCAGAAGTACAGTGGGAGTGAGGAAAAACCCCTTCCAGAGTCTGTAGCACTTATGGAGGA
CATTGTTGTGGAGTACATCACCGAACTTGTGTACAAAGCCCAGGAAATCGGATCAAAAAGGGGAAAGCTGTCAGTAGAAGACTTTTTGTATTTAATGCGCAAGGACTCGC
GCAAACTTAACCGCTCTACCGAACTGTTGTCCATGAACGAAGAGCTGAAACAGGCAAGGAGAGCTTTTGAGATAGATGAAGATAAGCTGAAAAAGGCTTTTGAAGAAGAA
GACAAATTGGATCATTACCAGGGTGATGGTGACAGTGGCGTGCAAGTCATTGCCTTCCCTTCTGAAGACGTCATGTGGTGCAGTGTGGATGCGGAACTGTTAAACATAAA
GATGATACTTCAGCGCGAGCTTCCTATAAGCCCTTTTGATCTGCTCGTCCGACGCACCCCGCGGCACTTGCAGTATATCATAGTAGCTTTTCCTGAATACAAAACAAGAA
AATTTAGCACAAAGCGAGATGAAATAGCCATTGCAGTGAAGCTACAAAGACGACCGGAGTCGTCCCCTGAACTTGGTCGTCGAGTCGATTCCACGAAACAAAATGTGGCC
GAAGCAAACGACTTTCCCAGTCACTACGCTTAG
Protein sequenceShow/hide protein sequence
MNFLRKRVGGPPAASKVSGAIQIGHVMGRVHITAQKTTQIPDVSAKSTFLSFGITQRWYALHDFSLRSSPDSPATTDKNETRPLWADALPSEVLRGRLASRPIYMRRRFH
DKNFTVFSLFSHQFLADQKYSGSEEKPLPESVALMEDIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDSRKLNRSTELLSMNEELKQARRAFEIDEDKLKKAFEEE
DKLDHYQGDGDSGVQVIAFPSEDVMWCSVDAELLNIKMILQRELPISPFDLLVRRTPRHLQYIIVAFPEYKTRKFSTKRDEIAIAVKLQRRPESSPELGRRVDSTKQNVA
EANDFPSHYA