CuGenDBv2

Gene ID	Sgr029592
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	Ribosomal protein
Genome location	tig00153403:2269352..2269675
RNA-Seq Expression	Sgr029592
Synteny	Sgr029592
Gene Ontology terms	GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006412 - translation (biological process) GO:0016020 - membrane (cellular component) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058588.1 50S ribosomal protein L1 [Cucumis melo var. makuwa]

2.0e-33

75.47

Show/hide

Query:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS
        MATC+PT  SS  MAHTSSVHPQD  SLLS RP AASST NIFSLCHPLILQ +GGRS NWVDL F RE R HLVVAALAA +EVAEVVEENGEEG  G+
Subjt:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS

Query:  AIQLCP
        A    P
Subjt:  AIQLCP

XP_004135947.2 50S ribosomal protein L1, chloroplastic [Cucumis sativus]

4.5e-33

75.47

Show/hide

Query:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS
        MATC+PT  SSL MAHTSSVHPQD  SLLS RP AASST NIFSLCHPLILQ +GGRSINWVDL F RE R HLVVAALAA +EV E VEENGEEG  G+
Subjt:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS

Query:  AIQLCP
        A  + P
Subjt:  AIQLCP

XP_016902660.1 PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Cucumis melo]

1.7e-32

74.53

Show/hide

Query:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS
        MATC+PT  SS  MAHTSSVHPQD  SLLS RP AASST NIFSLCHPLILQ +GGRS NWVDL F RE R HLVVAALAA +EVAEVVEEN EEG  G+
Subjt:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS

Query:  AIQLCP
        A    P
Subjt:  AIQLCP

XP_022152504.1 50S ribosomal protein L1, chloroplastic-like [Momordica charantia]

1.6e-38

81.13

Show/hide

Query:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS
        MATCSPTARSSL MAHTSSVHPQD+PSLLS RP AASST  IFSLCHPL +Q +GGRSINWVDLNFRRE+R HLVVAALAA +EVAEVVEENGEEGV G 
Subjt:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS

Query:  AIQLCP
        A  + P
Subjt:  AIQLCP

XP_038897614.1 50S ribosomal protein L1, chloroplastic-like [Benincasa hispida]

1.1e-34

78.3

Show/hide

Query:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS
        MATC+PT  SSL MAHTSSVHPQDL    SLRP A SST NIFSLCHPLILQ +GGRSINWVDLNFRRE+R HLVVAALAA +EVAEVVEENGEEG  GS
Subjt:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS

Query:  AIQLCP
        A  + P
Subjt:  AIQLCP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K886 Ribosomal protein

2.2e-33

75.47

Show/hide

Query:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS
        MATC+PT  SSL MAHTSSVHPQD  SLLS RP AASST NIFSLCHPLILQ +GGRSINWVDL F RE R HLVVAALAA +EV E VEENGEEG  G+
Subjt:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS

Query:  AIQLCP
        A  + P
Subjt:  AIQLCP

A0A1S4E3V7 Ribosomal protein

8.3e-33

74.53

Show/hide

Query:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS
        MATC+PT  SS  MAHTSSVHPQD  SLLS RP AASST NIFSLCHPLILQ +GGRS NWVDL F RE R HLVVAALAA +EVAEVVEEN EEG  G+
Subjt:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS

Query:  AIQLCP
        A    P
Subjt:  AIQLCP

A0A5D3CGN7 Ribosomal protein

9.8e-34

75.47

Show/hide

Query:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS
        MATC+PT  SS  MAHTSSVHPQD  SLLS RP AASST NIFSLCHPLILQ +GGRS NWVDL F RE R HLVVAALAA +EVAEVVEENGEEG  G+
Subjt:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS

Query:  AIQLCP
        A    P
Subjt:  AIQLCP

A0A6J1DG73 Ribosomal protein

7.8e-39

81.13

Show/hide

Query:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS
        MATCSPTARSSL MAHTSSVHPQD+PSLLS RP AASST  IFSLCHPL +Q +GGRSINWVDLNFRRE+R HLVVAALAA +EVAEVVEENGEEGV G 
Subjt:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS

Query:  AIQLCP
        A  + P
Subjt:  AIQLCP

A0A6J1JXL6 Ribosomal protein

1.5e-29

70.75

Show/hide

Query:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS
        MA  SPT  S L MA TSSVHP DL SL ++RP AASST +IFSLCHPLILQ +GGRSINWVDLNFRRE+R HLVVAALAA +EVAEVV+ENGE+   G 
Subjt:  MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGS

Query:  AIQLCP
        A  + P
Subjt:  AIQLCP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCACTTGTAGTCCCACTGCGCGGTCGTCCCTTATGATGGCGCACACTTCTTCAGTACACCCACAAGACCTTCCCTCCCTTCTCTCCCTCAGGCCCAGGGCT
GCCTCTTCCACCACCAACATCTTCTCTTTATGCCACCCCTTAATTCTGCAGCCCAAGGGAGGGAGGTCAATTAATTGGGTCGACCTTAATTTTAGGAGAGAAGCT
AGGTATCATTTGGTTGTCGCTGCTTTGGCAGCCGCAGTTGAGGTGGCTGAGGTTGTGGAAGAGAATGGAGAGGAGGGAGTTACTGGATCAGCTATTCAACTGTGC
CCAAGCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MATCSPTARSSLMMAHTSSVHPQDLPSLLSLRPRAASSTTNIFSLCHPLILQPKGGRSINWVDLNFRREARYHLVVAALAAAVEVAEVVEENGEEGVTGSAIQLC
PS

Sgr029592 (gene) of Monk fruit (Qingpiguo) v1 genome