; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr029705 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr029705
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptioncold shock domain-containing protein 3
Genome locationtig00153449:2001685..2002467
RNA-Seq ExpressionSgr029705
SyntenySgr029705
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR002059 - Cold-shock protein, DNA-binding
IPR011129 - Cold shock domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR019844 - Cold-shock (CSD) domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596667.1 Cold shock protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.0e-12390.94Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA GDDGKSKA+EVVALDGSSGNRRDNF  GGGRGGRGGG G+G 
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG

Query:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGSS-GGGGGAGAGACYNCGGFGHLARECNRGGAGGG
        GGWRGGDRRNGSSG GG GCY CGEQGHLARDC RA+NRGGGG  GGGCFTCGEVGHLARDCPRG+S GGGGGAG G CYNCGGFGHLAR+CNRGGAGGG
Subjt:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGSS-GGGGGAGAGACYNCGGFGHLARECNRGGAGGG

Query:  SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP
        S GGGGGGGCFNCGEYGHLARDC NESRNSG  GRFGGGG GGGANTCFNCGKSGHFARECPDAP
Subjt:  SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP

KAG7028203.1 Cold shock protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-12290.94Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA GDDGKSKA+EVVALDGSSGNRRDNF  GGGRGGRGGG G+G 
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG

Query:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGSS-GGGGGAGAGACYNCGGFGHLARECNRGGAGGG
        GGWRGGDRRNGSSG GG GCY CGEQGHLARDC RA+NRGGGG  GGGCFTCGEVGHLARDCPRG+S GGGGGAG G CYNCGGFGHLAR+CNRGGAGGG
Subjt:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGSS-GGGGGAGAGACYNCGGFGHLARECNRGGAGGG

Query:  SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP
        S GGGGGGGCFNCGEYGHLARDC NESRNSG  GRFGGGG GGGANTCFNCGKSGHFARECPDAP
Subjt:  SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP

XP_022145255.1 cold shock domain-containing protein 3 [Momordica charantia]6.0e-13292.78Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF---GGGRGGRGGGYGFG
        MAEERLTGVVQWF+DSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKA+EVV+LDGSSGNRRDNF   GGGRGGRGGGYGFG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF---GGGRGGRGGGYGFG

Query:  GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGGAGGGSG
        G GWRGGDRRNGSSG GGAGCYHCGEQGHLARDC RA+NRGGGGGGGCFTCGE+GHLARDCPRG+SGGGGGAGAGACYNCGGFGHLAR+CNRGGAGGGS 
Subjt:  GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGGAGGGSG

Query:  GGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP
        GGGGGGGCFNCGEYGHLAR+CPNESRNSG  GRFGGGG GGG+NTCFNCGKSGHFARECPDAP
Subjt:  GGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP

XP_022948847.1 cold shock protein 1-like [Cucurbita moschata]1.1e-12290.19Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG
        M EERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA GDDGKSKA+EVVALDGSSGNRRDNF  GGGRGGRGGG G+G 
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG

Query:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGSS-GGGGGAGAGACYNCGGFGHLARECNRGGAGGG
        GGWRGGDRRNGSSG GG GCY CGEQGHLARDC RA+NRGGGG  GGGCFTCGEVGHLARDCPRG+S GGGGGAG G CYNCGGFGHLAR+CNRGGAGGG
Subjt:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGSS-GGGGGAGAGACYNCGGFGHLARECNRGGAGGG

Query:  SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP
        S  GGGGGGCFNCGEYGHLARDC NESRNSG  GRFGGGG GGGANTCFNCGKSGHFARECPDAP
Subjt:  SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP

XP_023540854.1 cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo]1.8e-12390.6Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA GDDGKSKA+EVVALDGSSGNRRDNF  GGGRGGRGGG G+G 
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG

Query:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGSS-GGGGGAGAGACYNCGGFGHLARECNRGGAGGG
        GGWRGGDRRNGSSG GG GCY CGEQGHLARDC R +NRGGGG  GGGCFTCGEVGHLARDCPRG+S GGGGGAG G CYNCGGFGHLAR+CNRGGAGGG
Subjt:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGSS-GGGGGAGAGACYNCGGFGHLARECNRGGAGGG

Query:  S-GGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP
        S GGGGGGGGCFNCGEYGHLARDC NESRNSG  GRFGGGG GGGANTCFNCGKSGHFARECPDAP
Subjt:  S-GGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP

TrEMBL top hitse value%identityAlignment
A0A0A0L4X7 Uncharacterized protein6.1e-12286.76Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGR-----GGGYG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKA+EVVALDGSSGNRRDNFGGG GGR     GGG G
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGR-----GGGYG

Query:  FGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNR--GGGGGGGCFTCGEVGHLARDCPRGSS---GGGGGAGAGACYNCGGFGHLARECNRG
        +G GGWRGGDRRNG+SG GG GCY CGEQGHLARDC R +NR  GGGGGGGCFTCGEVGHLARDCPRG+S   GGGGG G GACYNCGGFGHLAR+CNRG
Subjt:  FGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNR--GGGGGGGCFTCGEVGHLARDCPRGSS---GGGGGAGAGACYNCGGFGHLARECNRG

Query:  GAGGGSGGGGGGGGCFNCGEYGHLARDCPNESRNS--GSAGRF-GGGGVGGGANTCFNCGKSGHFARECPDA
        GAGGGSGGGGGGGGCFNCGEYGH+ARDC NESR S  G  GRF GGGG GGG+NTCFNCGKSGHFARECPDA
Subjt:  GAGGGSGGGGGGGGCFNCGEYGHLARDCPNESRNS--GSAGRF-GGGGVGGGANTCFNCGKSGHFARECPDA

A0A6J1CTY3 cold shock domain-containing protein 32.9e-13292.78Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF---GGGRGGRGGGYGFG
        MAEERLTGVVQWF+DSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKA+EVV+LDGSSGNRRDNF   GGGRGGRGGGYGFG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF---GGGRGGRGGGYGFG

Query:  GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGGAGGGSG
        G GWRGGDRRNGSSG GGAGCYHCGEQGHLARDC RA+NRGGGGGGGCFTCGE+GHLARDCPRG+SGGGGGAGAGACYNCGGFGHLAR+CNRGGAGGGS 
Subjt:  GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGGAGGGSG

Query:  GGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP
        GGGGGGGCFNCGEYGHLAR+CPNESRNSG  GRFGGGG GGG+NTCFNCGKSGHFARECPDAP
Subjt:  GGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP

A0A6J1E5N5 cold shock domain-containing protein 3-like9.8e-12089.39Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGR-GGGYGFG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKA+EVVALDGSSGNRRDNF  GGGRGGR GGG G+G
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGR-GGGYGFG

Query:  GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNR-GGGGGGGCFTCGEVGHLARDCPRGSS--GGGGGAGAGACYNCGGFGHLARECNRGGAGG
         GGWRGGDRRNGSSG GG GCY CGEQGHLARDC RA+NR GGGGGGGCFTCGEVGHLARDCPRG+S  GGGGGAG GACYNCGGFGHLAR+CNRGGAGG
Subjt:  GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNR-GGGGGGGCFTCGEVGHLARDCPRGSS--GGGGGAGAGACYNCGGFGHLARECNRGGAGG

Query:  GSGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPD
        GS  GGGGGGCFNCGEYGHLARDC NESR SG  GRFG    GGGANTCFNCGKSGHFARECPD
Subjt:  GSGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPD

A0A6J1GAE9 cold shock protein 1-like5.5e-12390.19Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG
        M EERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA GDDGKSKA+EVVALDGSSGNRRDNF  GGGRGGRGGG G+G 
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG

Query:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGSS-GGGGGAGAGACYNCGGFGHLARECNRGGAGGG
        GGWRGGDRRNGSSG GG GCY CGEQGHLARDC RA+NRGGGG  GGGCFTCGEVGHLARDCPRG+S GGGGGAG G CYNCGGFGHLAR+CNRGGAGGG
Subjt:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGSS-GGGGGAGAGACYNCGGFGHLARECNRGGAGGG

Query:  SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP
        S  GGGGGGCFNCGEYGHLARDC NESRNSG  GRFGGGG GGGANTCFNCGKSGHFARECPDAP
Subjt:  SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP

A0A6J1KVQ4 cold shock domain-containing protein 3-like3.0e-12189.1Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA GDDGKSKA+EVVALDGSSGNRRDNF  GGGRGGRGGG G+G 
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNF--GGGRGGRGGGYGFGG

Query:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGS--SGGGGGAGAGACYNCGGFGHLARECNRGGAGG
        GGWRGGDRRNGSSG GG GCY CGEQGHLARDC R +NRGGGG  GGGCFTCGEVGHLARDC RG+   GGGGGAG G CYNCGGFGHLAR+CNRGGAGG
Subjt:  GGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGG--GGGCFTCGEVGHLARDCPRGS--SGGGGGAGAGACYNCGGFGHLARECNRGGAGG

Query:  GSGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP
        G GGGGGGGGCFNCGEYGHLARDC NESRNS   GRFGGGG GGGANTCFNCGKSGHFARECPDAP
Subjt:  GSGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP

SwissProt top hitse value%identityAlignment
O65639 Cold shock protein 13.2e-5148.97Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGRGGG----YGFG---
        R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+KAV V A  G S  + +N  G    RGGG    Y  G   
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGRGGG----YGFG---

Query:  --------GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATN---RGG--GGGGGCFTCGEVGHLARDCPRGSSGGGGGAGA-----GACYNCGG
                GGG  GG+RR+     GG GCY+CG+ GH ARDC  A N   RG   GG  GC+TCG+VGH+ARDC + S G G   GA       CY CG 
Subjt:  --------GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATN---RGG--GGGGGCFTCGEVGHLARDCPRGSSGGGGGAGA-----GACYNCGG

Query:  FGHLAREC-NRGGAGGGSGGGGGGGGCFNCGEYGHLARDCPNESRNS------GSAGRFG------GGGVGGGANTCFNCGKSGHFAREC
         GH AR+C  +  AG    GGGG G C++CG  GH+ARDC  + + S      G +G         G G GG  N C+ CGK GHFAREC
Subjt:  FGHLAREC-NRGGAGGGSGGGGGGGGCFNCGEYGHLARDCPNESRNS------GSAGRFG------GGGVGGGANTCFNCGKSGHFAREC

P27484 Glycine-rich protein 22.7e-4248.65Show/hide
Query:  MAEE---RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGRGGGYGFG
        MAEE   R  G V+WF+D KGFGFI PD  G DLFVHQS I+S+G+RSL  G+ VEF++  G DG++KAV+V   DG++        GGRGG GGG G G
Subjt:  MAEE---RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGRGGGYGFG

Query:  GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGGAGGGSG
        GGG+ G     GS G GG G               R  +RG GGG G +                 GGGGG G G+ Y  GG G+       GG G G G
Subjt:  GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGGAGGGSG

Query:  GGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFAREC
        G GGG GCF CGE GH ARDC ++S   G  GRFGGGG GGG   C+ CG+ GHFAREC
Subjt:  GGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFAREC

Q38896 Cold shock domain-containing protein 41.0e-3347.44Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGRGGGYGFGGGGWRG
        +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+ KA+EV   DG+        GG  GGRG   GFGGGG RG
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGRGGGYGFGGGGWRG

Query:  GDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGGAGGGSGGGGGGG
        G R  GS G GG G    G +G            GGGG   CF CGE GH+AR+C +G  G  GG G G                R G+GGG GGGGGG 
Subjt:  GDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGGAGGGSGGGGGGG

Query:  GCFNCGEYGHLARDC
         C++CGE GH ARDC
Subjt:  GCFNCGEYGHLARDC

Q41188 Cold shock protein 21.4e-3546.55Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGS---------SGNRRDNFGGGRG---GRG
        ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ + KA++V   DG+         S   R  FGGGRG   G G
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGS---------SGNRRDNFGGGRG---GRG

Query:  GGYGFGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGG
        GGYG GGGG+ G     G  G GG+ CY CGE GH+ARDC+      GGGGGG                   GGGGG G G     GG+G          
Subjt:  GGYGFGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGG

Query:  AGGGSGGGGGGGGCFNCGEYGHLARDCPNESR
         GGG GGGGGGG C++CGE GH ARDC +  R
Subjt:  AGGGSGGGGGGGGCFNCGEYGHLARDCPNESR

Q94C69 Cold shock domain-containing protein 32.5e-5649.34Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGR--------------
        R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+KA+EV A  G S N+++N   G GG               
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGR--------------

Query:  ---GGGYGFGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRA--TNRGGGGGGG--CFTCGEVGHLARDCPRGSS----GGGGGAGAG--ACYNC
            GG  FGG    GG RR+G  G     CY CG+ GH ARDC ++   N GGGGGGG  C++CGEVGHLA+DC  GS     GGGGG G+G   CY C
Subjt:  ---GGGYGFGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRA--TNRGGGGGGG--CFTCGEVGHLARDCPRGSS----GGGGGAGAG--ACYNC

Query:  GGFGHLARECNRGGAG------------GG-------------SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHF
        GG GH AR+C + G G            GG             SGGGGGG  C+ CG  GHLARDC  + R SGS+G       GGG+N CF CGK GHF
Subjt:  GGFGHLARECNRGGAG------------GG-------------SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHF

Query:  AREC
        AREC
Subjt:  AREC

Arabidopsis top hitse value%identityAlignment
AT2G17870.1 cold shock domain protein 31.8e-5749.34Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGR--------------
        R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+KA+EV A  G S N+++N   G GG               
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGR--------------

Query:  ---GGGYGFGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRA--TNRGGGGGGG--CFTCGEVGHLARDCPRGSS----GGGGGAGAG--ACYNC
            GG  FGG    GG RR+G  G     CY CG+ GH ARDC ++   N GGGGGGG  C++CGEVGHLA+DC  GS     GGGGG G+G   CY C
Subjt:  ---GGGYGFGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRA--TNRGGGGGGG--CFTCGEVGHLARDCPRGSS----GGGGGAGAG--ACYNC

Query:  GGFGHLARECNRGGAG------------GG-------------SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHF
        GG GH AR+C + G G            GG             SGGGGGG  C+ CG  GHLARDC  + R SGS+G       GGG+N CF CGK GHF
Subjt:  GGFGHLARECNRGGAG------------GG-------------SGGGGGGGGCFNCGEYGHLARDCPNESRNSGSAGRFGGGGVGGGANTCFNCGKSGHF

Query:  AREC
        AREC
Subjt:  AREC

AT2G21060.1 glycine-rich protein 2B7.3e-3547.44Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGRGGGYGFGGGGWRG
        +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+ KA+EV   DG+        GG  GGRG   GFGGGG RG
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGRGGGYGFGGGGWRG

Query:  GDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGGAGGGSGGGGGGG
        G R  GS G GG G    G +G            GGGG   CF CGE GH+AR+C +G  G  GG G G                R G+GGG GGGGGG 
Subjt:  GDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGGAGGGSGGGGGGG

Query:  GCFNCGEYGHLARDC
         C++CGE GH ARDC
Subjt:  GCFNCGEYGHLARDC

AT2G36120.1 Glycine-rich protein family3.5e-0544.51Show/hide
Query:  GGGRGGRGGGYGFGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHL
        GGG GG GGG G GGGG  GG    GS   GGAG Y  GE G            GGGGGGG    G  G  A     G  GGG GAGAG  Y  GG G  
Subjt:  GGGRGGRGGGYGFGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHL

Query:  ARECNRGGAGGGSGGGGGGGGCFNCGEY--GHLARDCPNESRNSGS-AGRFGGGGVGGGANTCFNCGKSGHFA
              GG GGG  GGGGGGG    G +  G+ A     E    G+ AG  GGGG GGG +     G  G+ A
Subjt:  ARECNRGGAGGGSGGGGGGGGCFNCGEY--GHLARDCPNESRNSGS-AGRFGGGGVGGGANTCFNCGKSGHFA

AT4G36020.1 cold shock domain protein 12.3e-5248.97Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGRGGG----YGFG---
        R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+KAV V A  G S  + +N  G    RGGG    Y  G   
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGRGGG----YGFG---

Query:  --------GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATN---RGG--GGGGGCFTCGEVGHLARDCPRGSSGGGGGAGA-----GACYNCGG
                GGG  GG+RR+     GG GCY+CG+ GH ARDC  A N   RG   GG  GC+TCG+VGH+ARDC + S G G   GA       CY CG 
Subjt:  --------GGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATN---RGG--GGGGGCFTCGEVGHLARDCPRGSSGGGGGAGA-----GACYNCGG

Query:  FGHLAREC-NRGGAGGGSGGGGGGGGCFNCGEYGHLARDCPNESRNS------GSAGRFG------GGGVGGGANTCFNCGKSGHFAREC
         GH AR+C  +  AG    GGGG G C++CG  GH+ARDC  + + S      G +G         G G GG  N C+ CGK GHFAREC
Subjt:  FGHLAREC-NRGGAGGGSGGGGGGGGCFNCGEYGHLARDCPNESRNS------GSAGRFG------GGGVGGGANTCFNCGKSGHFAREC

AT4G38680.1 glycine rich protein 21.0e-3646.55Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGS---------SGNRRDNFGGGRG---GRG
        ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ + KA++V   DG+         S   R  FGGGRG   G G
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGS---------SGNRRDNFGGGRG---GRG

Query:  GGYGFGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGG
        GGYG GGGG+ G     G  G GG+ CY CGE GH+ARDC+      GGGGGG                   GGGGG G G     GG+G          
Subjt:  GGYGFGGGGWRGGDRRNGSSGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGG

Query:  AGGGSGGGGGGGGCFNCGEYGHLARDCPNESR
         GGG GGGGGGG C++CGE GH ARDC +  R
Subjt:  AGGGSGGGGGGGGCFNCGEYGHLARDCPNESR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAGAGATTGACTGGTGTGGTTCAGTGGTTTAACGACTCGAAAGGATTTGGCTTCATCAAGCCTGATGTTGAAGGCCCGGATCTGTTTGTTCATCAATCATC
GATTAAGTCTGATGGCTACCGTAGCCTTGTCGTCGGAGACCACGTGGAGTTTCAGATCGCCCCGGGTGATGATGGCAAATCAAAAGCCGTTGAGGTCGTTGCCCTTGATG
GGTCTTCGGGCAACAGGAGAGATAACTTTGGTGGTGGAAGGGGTGGCCGTGGCGGCGGTTATGGTTTTGGTGGCGGTGGTTGGAGAGGCGGTGATAGGCGCAACGGTAGC
AGTGGACCCGGTGGGGCTGGGTGCTATCACTGCGGGGAGCAAGGTCATTTGGCCAGAGACTGCAATCGTGCTACTAATCGCGGCGGCGGCGGCGGCGGGGGTTGTTTTAC
TTGCGGTGAAGTTGGGCACCTAGCGAGGGATTGCCCACGAGGAAGCAGCGGCGGAGGTGGCGGTGCCGGTGCTGGGGCTTGCTATAATTGTGGTGGTTTTGGTCACTTGG
CCAGGGAATGTAACCGGGGTGGGGCTGGAGGTGGAAGTGGTGGTGGAGGTGGAGGTGGTGGTTGCTTTAATTGCGGGGAATATGGACATTTAGCCAGAGATTGCCCGAAT
GAAAGCCGTAACAGTGGCAGCGCCGGAAGATTTGGCGGCGGCGGCGTCGGCGGCGGCGCAAACACCTGCTTCAATTGTGGGAAATCGGGGCATTTTGCCAGGGAGTGTCC
TGATGCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAGAGAGATTGACTGGTGTGGTTCAGTGGTTTAACGACTCGAAAGGATTTGGCTTCATCAAGCCTGATGTTGAAGGCCCGGATCTGTTTGTTCATCAATCATC
GATTAAGTCTGATGGCTACCGTAGCCTTGTCGTCGGAGACCACGTGGAGTTTCAGATCGCCCCGGGTGATGATGGCAAATCAAAAGCCGTTGAGGTCGTTGCCCTTGATG
GGTCTTCGGGCAACAGGAGAGATAACTTTGGTGGTGGAAGGGGTGGCCGTGGCGGCGGTTATGGTTTTGGTGGCGGTGGTTGGAGAGGCGGTGATAGGCGCAACGGTAGC
AGTGGACCCGGTGGGGCTGGGTGCTATCACTGCGGGGAGCAAGGTCATTTGGCCAGAGACTGCAATCGTGCTACTAATCGCGGCGGCGGCGGCGGCGGGGGTTGTTTTAC
TTGCGGTGAAGTTGGGCACCTAGCGAGGGATTGCCCACGAGGAAGCAGCGGCGGAGGTGGCGGTGCCGGTGCTGGGGCTTGCTATAATTGTGGTGGTTTTGGTCACTTGG
CCAGGGAATGTAACCGGGGTGGGGCTGGAGGTGGAAGTGGTGGTGGAGGTGGAGGTGGTGGTTGCTTTAATTGCGGGGAATATGGACATTTAGCCAGAGATTGCCCGAAT
GAAAGCCGTAACAGTGGCAGCGCCGGAAGATTTGGCGGCGGCGGCGTCGGCGGCGGCGCAAACACCTGCTTCAATTGTGGGAAATCGGGGCATTTTGCCAGGGAGTGTCC
TGATGCACCTTGA
Protein sequenceShow/hide protein sequence
MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAVEVVALDGSSGNRRDNFGGGRGGRGGGYGFGGGGWRGGDRRNGS
SGPGGAGCYHCGEQGHLARDCNRATNRGGGGGGGCFTCGEVGHLARDCPRGSSGGGGGAGAGACYNCGGFGHLARECNRGGAGGGSGGGGGGGGCFNCGEYGHLARDCPN
ESRNSGSAGRFGGGGVGGGANTCFNCGKSGHFARECPDAP