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Sgr029726 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr029726
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionDNA-directed RNA polymerase subunit
Genome locationtig00153449:2193975..2194244
RNA-Seq ExpressionSgr029726
SyntenySgr029726
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052935.1 DNA-directed RNA polymerase II subunit 1 [Cucumis melo var. makuwa]4.2e-0861.54Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVILY----HLNFVLFCLIVCLNVDGSFGGEKALHFYE
        MDLRFPYSPAEVAKVRMVQFGILSPDEIVIL       +F+L   ++ L   G    + ALH YE
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVILY----HLNFVLFCLIVCLNVDGSFGGEKALHFYE

KAF7809617.1 DNA-directed RNA polymerase II subunit 1 [Senna tora]6.7e-0690.32Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVIL
        MD+RFPYSPAEV+KVR+VQFGILSPDEIVIL
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVIL

KAG6596260.1 DNA-directed RNA polymerase II subunit rpb1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-05100Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI
        MDLRFPYSPAEVAKVRMVQFGILSPDEI
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI

OWM68245.1 hypothetical protein CDL15_Pgr004727 [Punica granatum]6.7e-0696.67Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVI
        MDLRFP+SPAEVAKVRMVQFGILSPDEIVI
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVI

TYK11392.1 DNA-directed RNA polymerase II subunit 1 [Cucumis melo var. makuwa]4.2e-0861.54Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVILY----HLNFVLFCLIVCLNVDGSFGGEKALHFYE
        MDLRFPYSPAEVAKVRMVQFGILSPDEIVIL       +F+L   ++ L   G    + ALH YE
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVILY----HLNFVLFCLIVCLNVDGSFGGEKALHFYE

TrEMBL top hitse value%identityAlignment
A0A061DGE8 DNA-directed RNA polymerase subunit5.5e-06100Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI
        MDLRFPYSPAEVAKVRMVQFGILSPDEI
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI

A0A218W651 DNA-directed RNA polymerase subunit3.2e-0696.67Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVI
        MDLRFP+SPAEVAKVRMVQFGILSPDEIVI
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVI

A0A5A7UGR7 DNA-directed RNA polymerase subunit2.0e-0861.54Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVILY----HLNFVLFCLIVCLNVDGSFGGEKALHFYE
        MDLRFPYSPAEVAKVRMVQFGILSPDEIVIL       +F+L   ++ L   G    + ALH YE
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVILY----HLNFVLFCLIVCLNVDGSFGGEKALHFYE

A0A5D3CJC8 DNA-directed RNA polymerase subunit2.0e-0861.54Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVILY----HLNFVLFCLIVCLNVDGSFGGEKALHFYE
        MDLRFPYSPAEVAKVRMVQFGILSPDEIVIL       +F+L   ++ L   G    + ALH YE
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEIVILY----HLNFVLFCLIVCLNVDGSFGGEKALHFYE

A0A6J1I682 DNA-directed RNA polymerase subunit5.5e-06100Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI
        MDLRFPYSPAEVAKVRMVQFGILSPDEI
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI

SwissProt top hitse value%identityAlignment
P18616 DNA-directed RNA polymerase II subunit RPB11.1e-0685.71Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI
        MD RFP+SPAEV+KVR+VQFGILSPDEI
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI

Arabidopsis top hitse value%identityAlignment
AT4G35800.1 RNA polymerase II large subunit7.6e-0885.71Show/hide
Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI
        MD RFP+SPAEV+KVR+VQFGILSPDEI
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGCGATTCCCATACTCGCCGGCGGAGGTCGCCAAAGTCCGCATGGTTCAGTTTGGCATACTTAGCCCTGACGAGATTGTAATTCTCTATCACCTGAATTTCGT
TCTTTTTTGTTTGATAGTCTGTTTGAATGTCGATGGGTCGTTCGGGGGTGAGAAAGCTTTACATTTCTATGAACTGAGTATACTTTATGCTGTGGGCAGTGGCTTAATTT
GCCTTTTTGCTGCGTATTGTGTTATTGATGCTCTCTCTGCTTGTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGCGATTCCCATACTCGCCGGCGGAGGTCGCCAAAGTCCGCATGGTTCAGTTTGGCATACTTAGCCCTGACGAGATTGTAATTCTCTATCACCTGAATTTCGT
TCTTTTTTGTTTGATAGTCTGTTTGAATGTCGATGGGTCGTTCGGGGGTGAGAAAGCTTTACATTTCTATGAACTGAGTATACTTTATGCTGTGGGCAGTGGCTTAATTT
GCCTTTTTGCTGCGTATTGTGTTATTGATGCTCTCTCTGCTTGTTTATGA
Protein sequenceShow/hide protein sequence
MDLRFPYSPAEVAKVRMVQFGILSPDEIVILYHLNFVLFCLIVCLNVDGSFGGEKALHFYELSILYAVGSGLICLFAAYCVIDALSACL