; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr029780 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr029780
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptioncold shock domain-containing protein 3-like
Genome locationtig00153490:1203991..1212926
RNA-Seq ExpressionSgr029780
SyntenySgr029780
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR010666 - Zinc finger, GRF-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577083.1 DNA topoisomerase 3-alpha, partial [Cucurbita argyrosperma subsp. sororia]4.1e-12580.94Show/hide
Query:  MRIEAKRNFDFDLEDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNK
        M+ EAK NFDFDL DDDDEDFL EVAAAEARALA+KRR+IPN   DPPK AI EV  KVSPN D EG+YIAALKG+P  LSQ+SG IANS       GNK
Subjt:  MRIEAKRNFDFDLEDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNK

Query:  GFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASG
        GFISAN T  AQSEGGGSCFKCGKLGHWARDCDA G GGSF  SGNDTS+AEK+CPCG+GVC++LTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS 
Subjt:  GFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASG

Query:  TNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG
        TN+MTYGSQNRASSSSFSDL CPCGAGSCI LTAKTGENVGQQFYRCPSYQ TCGFFQWC+E  +AAKNQVS SK  G
Subjt:  TNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG

KAG7015092.1 DNA topoisomerase 3-alpha, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-12781.65Show/hide
Query:  MRIEAKRNFDFDLEDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNK
        M+ EAKRNFDFDL DDDDEDFLSEVAAAEARALA+KRR+IPN   DPPK AI EV  KVSPN D EG+YIAALKG+P  LSQ+SG IANS       GNK
Subjt:  MRIEAKRNFDFDLEDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNK

Query:  GFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASG
        GFISAN T  AQSEGGGSCFKCGKLGHWARDCDA G GGSF  SGNDTS+AEK+CPCG+GVC++LTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS 
Subjt:  GFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASG

Query:  TNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG
        TN+MTYGSQNRASSSSFSDL CPCGAGSCI LTAKTGENVGQQFYRCPSYQ TCGFFQWC+E  +AAKNQVS SK  G
Subjt:  TNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG

XP_022136561.1 DNA-binding protein HEXBP-like [Momordica charantia]7.5e-12781.52Show/hide
Query:  MRIEAKRNFDFDLEDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNK
        M+IEAKRNF+FDLEDDDDEDFLS VAAAEARALA+KRRRIPN   DPPK AI E         + EGLY+AAL+G P   SQISGG ANSR K VAA N+
Subjt:  MRIEAKRNFDFDLEDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNK

Query:  GFISANPTAQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASGTN
        GF+SANPTAQSEGGGSCFKCGKLGHWARDCDA GGGGSFGT+G D S+AEKACPCGLGVC++LTANTERNRGRKFYKCPVRQENGGCGFFEWCD+ASGTN
Subjt:  GFISANPTAQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASGTN

Query:  VMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG
        VMTYGSQNRASSS FSDL CPCGAGSCIILTAKTGENVGQQFYRCPSYQE+CGFFQWC+EPP+A KNQV+  K  G
Subjt:  VMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG

XP_022931285.1 cold shock domain-containing protein 3-like [Cucurbita moschata]1.4e-12581.36Show/hide
Query:  MRIEAKRNFDFDL-EDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGN
        M+ EAKRNFDFDL +DDDDEDFLSEVAAAEARALA+KRR+IPN   DPPK AI EV  KVSPN D EG+YIAALKG+P  LSQ+SG IANS       GN
Subjt:  MRIEAKRNFDFDL-EDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGN

Query:  KGFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS
        KGFISAN T  AQSEGGGSCFKCGKLGHWARDCDA G GGSF  SGNDTS+AEK+CPCG+GVC++LTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS
Subjt:  KGFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS

Query:  GTNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG
         TN+MTYGSQNRASSSSFSDL CPCGAGSCI LTAKTGENVGQQFYRCPSYQ TCGFFQWC+E  +AAKNQVS SK  G
Subjt:  GTNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG

XP_023552737.1 cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo]8.2e-12680.58Show/hide
Query:  MRIEAKRNFDFDLEDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNK
        M+ EAKRNFDFDL DDDDEDFLSEVAAAEARALA+KRR+IPN   DPPK A+ EV  KVSPN D EG+YIAALKG+P  LSQ+SG IANS       GNK
Subjt:  MRIEAKRNFDFDLEDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNK

Query:  GFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASG
        GFISAN T  AQSEGGGSCFKCGKLGHWARDCDA G GGSF  SGNDTS+AEK+CPCG+GVC++LTANTERNRGRKFYKC VRQENGGCGFFEWCDNAS 
Subjt:  GFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASG

Query:  TNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG
        TN+MTYGSQNRASSSSFSDL CPCGAGSCI LTAKTG+NVGQQFYRCPSYQ TCGFFQWC+EP +AAKNQ S SK  G
Subjt:  TNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG

TrEMBL top hitse value%identityAlignment
A0A0A0KVB6 Uncharacterized protein8.4e-8465.6Show/hide
Query:  AAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNKGFISANPTAQSEGGGSCFKCGKLGHW
        AAE  +L  K R +PN   D PKNA+ EV+ KV  N D  G YIA  KG+   LSQISG  A+S   +        I  N TAQSEG GSCFKCGKLGHW
Subjt:  AAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNKGFISANPTAQSEGGGSCFKCGKLGHW

Query:  ARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASGTNVMTYGSQNRASSSSFSDLPCPCGAGS
        ARDCDA GGGGSF +SGND S+ +KACPCG G+C +LTANTERNRGRKFYKCPVRQENGGCGFFEWCD+AS  NV++YGSQN   SSSFSDL CPCGAGS
Subjt:  ARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASGTNVMTYGSQNRASSSSFSDLPCPCGAGS

Query:  CIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG
        C ILTAKTG NVG+QFY CPS Q +C FF+WC EP +  KNQ S  K  G
Subjt:  CIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG

A0A6J1C4N6 DNA-binding protein HEXBP-like3.6e-12781.52Show/hide
Query:  MRIEAKRNFDFDLEDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNK
        M+IEAKRNF+FDLEDDDDEDFLS VAAAEARALA+KRRRIPN   DPPK AI E         + EGLY+AAL+G P   SQISGG ANSR K VAA N+
Subjt:  MRIEAKRNFDFDLEDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNK

Query:  GFISANPTAQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASGTN
        GF+SANPTAQSEGGGSCFKCGKLGHWARDCDA GGGGSFGT+G D S+AEKACPCGLGVC++LTANTERNRGRKFYKCPVRQENGGCGFFEWCD+ASGTN
Subjt:  GFISANPTAQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASGTN

Query:  VMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG
        VMTYGSQNRASSS FSDL CPCGAGSCIILTAKTGENVGQQFYRCPSYQE+CGFFQWC+EPP+A KNQV+  K  G
Subjt:  VMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG

A0A6J1EZ11 cold shock domain-containing protein 3-like6.8e-12681.36Show/hide
Query:  MRIEAKRNFDFDL-EDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGN
        M+ EAKRNFDFDL +DDDDEDFLSEVAAAEARALA+KRR+IPN   DPPK AI EV  KVSPN D EG+YIAALKG+P  LSQ+SG IANS       GN
Subjt:  MRIEAKRNFDFDL-EDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGN

Query:  KGFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS
        KGFISAN T  AQSEGGGSCFKCGKLGHWARDCDA G GGSF  SGNDTS+AEK+CPCG+GVC++LTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS
Subjt:  KGFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS

Query:  GTNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG
         TN+MTYGSQNRASSSSFSDL CPCGAGSCI LTAKTGENVGQQFYRCPSYQ TCGFFQWC+E  +AAKNQVS SK  G
Subjt:  GTNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG

A0A6J1JBZ0 cold shock domain-containing protein 3-like3.4e-12581Show/hide
Query:  MRIEAKRNFDFDL-EDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGN
        M+ EAKRNFDFDL +DDDDEDFLSEVAAAEARALA+KRR+IPN   +PPK AI EV +KVSPN D EG+YIAALKG+P  LSQ+SG IANS       GN
Subjt:  MRIEAKRNFDFDL-EDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGN

Query:  KGFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS
        KGFISAN T  AQS+GGGSCFKCGKLGHWARDCDA G GGSF  S NDTS+AEK+CPCG GVC++LTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS
Subjt:  KGFISANPT--AQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS

Query:  GTNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG
         TN+MTYGSQNRASSSSFSDL CPCGAGSCI LTAKTGENVGQQFYRCPSYQ TCGFFQWC+EP +AAKNQVSASK  G
Subjt:  GTNVMTYGSQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG

A0A6P3YZ85 DNA-binding protein HEXBP-like isoform X11.3e-7657.71Show/hide
Query:  MRIEAKRNF-DFDLEDDDDEDFLSEVAAAEARALAAKRRRIP-NQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAG
        M+IEAK++F +   +DDDD+DFLS+VAA EA ALA KRR++  +Q +  P +    +  K   +  V+GLY AALKGN T   Q +      RVK+VA  
Subjt:  MRIEAKRNF-DFDLEDDDDEDFLSEVAAAEARALAAKRRRIP-NQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAG

Query:  NKGFISANPTAQSEGGGSCFKCGKLGHWARDCDAS-GGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS
        N      +   +S  G SCFKCGK+GHWARDCDA+ GGGG FG    D SI EK CPCG G CL+LTANTE+NRGRKFYKCP+RQENGGCGFFEW DNAS
Subjt:  NKGFISANPTAQSEGGGSCFKCGKLGHWARDCDAS-GGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNAS

Query:  GTNVMTYG--SQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCP-SYQETCGFFQWCREPPIAAKNQVSASK
        G N M  G    N AS SS+ DL CPCGAG C+ILTAKTG+NVG+QFYRCP S   +C FF+WC E   +A   VSASK
Subjt:  GTNVMTYG--SQNRASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCP-SYQETCGFFQWCREPPIAAKNQVSASK

SwissProt top hitse value%identityAlignment
C7J0A2 DNA topoisomerase 3-alpha1.5e-0536.26Show/hide
Query:  GGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASGTNVMTYGSQNRASSSSFSDLPCPCGAG
        G  S  T  +  +  +  C      C+L TANTE NRGRKFYKC    +N  CGFF W D+   +     G + R   SS         AG
Subjt:  GGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASGTNVMTYGSQNRASSSSFSDLPCPCGAG

Q94C69 Cold shock domain-containing protein 31.7e-0441.27Show/hide
Query:  VAAGNKGFISANPTAQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKAC-PCG
        V A   G ++    +    GG+CF CG++GH A+DCD   GG SFG  G   S  E  C  CG
Subjt:  VAAGNKGFISANPTAQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKAC-PCG

Q9LVP1 DNA topoisomerase 3-alpha3.4e-0536.27Show/hide
Query:  CFKCGKLGHWARDC----DASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCD---NASGTNVMTYGSQNR
        C  C + GH + +C     AS       T+  +         CG   C+L TANTE NRGR+F+ CP +    GC FF W D   N+SG    T GS + 
Subjt:  CFKCGKLGHWARDC----DASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCD---NASGTNVMTYGSQNR

Query:  AS
         S
Subjt:  AS

Q9NG98 DNA topoisomerase 3-alpha6.8e-0625.16Show/hide
Query:  NRGRKFYKCPVRQENGGCGFFEWCD---------NASGT---NVMTYGS----------------------------------------QNRASSSSFSD
        N GR +YKCP   E   C FF+W D         N++G+   +  ++GS                                        +N A+     +
Subjt:  NRGRKFYKCPVRQENGGCGFFEWCD---------NASGT---NVMTYGS----------------------------------------QNRASSSSFSD

Query:  LPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG
        + C CG  +  +   K G N G+ FY CP+ +++CGFF+W  E     +NQ ++S   G
Subjt:  LPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIG

Arabidopsis top hitse value%identityAlignment
AT1G30540.1 Actin-like ATPase superfamily protein3.4e-1351.32Show/hide
Query:  HRNGEIWEFEREMSG----GTGGVEDVILGIDGGTTSTICVCVPFLQPQSLHLPDPLPLLARVEAGCSNHNSVGGT
        H NG + + E +  G      G V  VILG+DGG TST+CVCVPF        PDPLP+L R  AGC+N NSVG T
Subjt:  HRNGEIWEFEREMSG----GTGGVEDVILGIDGGTTSTICVCVPFLQPQSLHLPDPLPLLARVEAGCSNHNSVGGT

AT1G54930.1 GRF zinc finger / Zinc knuckle protein2.2e-0746.94Show/hide
Query:  ASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWC
        A++ S  D+ CPC AG C  +T+KT +N  ++FY CPS    CG+F+WC
Subjt:  ASSSSFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWC

AT2G17870.1 cold shock domain protein 31.2e-0541.27Show/hide
Query:  VAAGNKGFISANPTAQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKAC-PCG
        V A   G ++    +    GG+CF CG++GH A+DCD   GG SFG  G   S  E  C  CG
Subjt:  VAAGNKGFISANPTAQSEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKAC-PCG

AT3G42860.1 zinc knuckle (CCHC-type) family protein4.3e-4841.92Show/hide
Query:  DDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNKGFISANPTAQSEGGG
        D+++DFL ++AA EA A AAKR R+         ++IP            EG Y+AALKG+ +   Q S     S+ + VA    GF       +S+GGG
Subjt:  DDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNKGFISANPTAQSEGGG

Query:  SCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCD--NASGTNVMTYGSQNRASSS
                                G +G +    EK+CPCG+G+CL+LT+NT +N GRKFYKCP R+ENGGCGFF+WCD   +SGT+  T  S    + +
Subjt:  SCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCD--NASGTNVMTYGSQNRASSS

Query:  SFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASK
         F D  CPCGAG C +LTAKTGENVG+QFYRCP ++ +CGFF+WC +  +++    S +K
Subjt:  SFSDLPCPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASK

AT5G13920.1 GRF zinc finger / Zinc knuckle protein1.7e-0746.43Show/hide
Query:  NRASSSSFSDLP-----CPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWC
        N     S++D P     CPCG G C I  A T EN G++FY+CP+ Q  C FF+WC
Subjt:  NRASSSSFSDLP-----CPCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATCGAAGCTAAGAGGAACTTCGATTTCGATCTCGAAGATGACGACGATGAGGATTTCCTTTCTGAGGTGGCCGCGGCTGAAGCTCGTGCCCTCGCCGCTAAACG
CAGAAGAATCCCCAATCAAGCCTCCGATCCGCCCAAAAACGCTATCCCGGAGGTTGCGGACAAAGTTTCCCCTAATCCAGACGTGGAGGGACTCTACATCGCCGCTTTGA
AAGGAAACCCTACTTTTCTTTCTCAAATTTCAGGTGGGATAGCCAATTCGAGGGTGAAGCTCGTTGCTGCTGGCAACAAAGGGTTCATTTCTGCAAATCCTACTGCTCAA
TCGGAAGGTGGAGGCTCGTGTTTCAAATGCGGGAAATTAGGGCATTGGGCCAGAGACTGCGATGCTTCGGGAGGTGGTGGGTCTTTTGGCACTTCTGGGAATGATACGTC
CATTGCGGAGAAAGCATGCCCCTGCGGATTGGGAGTTTGTTTACTACTAACTGCGAATACGGAGAGGAATCGGGGTCGAAAATTTTACAAATGTCCTGTTCGACAGGAAA
ATGGTGGCTGCGGATTCTTTGAGTGGTGTGACAATGCTTCTGGAACTAATGTGATGACTTATGGAAGCCAAAATCGGGCATCAAGTTCATCATTTTCAGACCTTCCGTGC
CCCTGTGGTGCTGGTTCTTGCATAATTCTAACAGCCAAAACAGGGGAAAATGTTGGTCAGCAATTCTATCGTTGCCCTTCATACCAGGAAACTTGTGGGTTTTTCCAGTG
GTGCAGGGAGCCTCCCATAGCTGCCAAGAATCAAGTGAGTGCCTCTAAGGGCATTGGGCTAGAGATTGCTCGCAATCACATGCATCATCCAATCCTCCTGCAGAGTTGGG
GAGAAGTTCATCTTCATTTGGAACCTGTTTCAAATGCGGTAAGCCCGGCCATTGGGCGAGGGACTGTCCTAATTGTTAATAGTCACCTGACATTTTGCTTATTTTGCCCG
CCATCCATTGCTCCAGTTGACTGTGCCGCCAACAAGCAAATGAGAATCACATTCAAATGCTCAAATTCCGAGCACTCCTTCCCACAATCTCCAGGCGAGCATAACCAAGA
ACCATCGCCCAGCTTCCACGCCGAGTTCTTCGGACCGGTGCTCGACCGGACTACCGCCGGCGAACTATCTCCCCGGCGGCCGAAGCTTCCGACTCGCTGCTGTGGTTCGG
CTTCCGTGTCTTGGCGGAGCTTCACGACTGTGTACGCGGCTGCGCCGGCTACTGCTCCGGCGGTGGGCGCTACAATTGGCGACTGCAACAATGACGAACATGAGGACGAA
GGTGACGATGAACTCGATTACAAGCGCCCGGCAGGTGCCGACGGAGGGCACGGTGACGCCGCCGGACATGAACGGGTGGAAGACGGCCTTGAGGCTGAAAGCAGCGGAGA
TGGATCCAGAAATCTGAGCGCCGATGTAGAGCGGCAGGTGAAGCCATGGAAAGTGACGGAGAGCGGCGTAAGCTACGGTGACCGATGGATTCAAGTGAGCGCCGGAGATG
TGGCCGATGGAGAGGATTACGGCCATCACGGCCAGCCCAGCGCAGATCGCACTTGTTATCAGCCCGCTCTCCGTCGCCTGAAGGGACATGGAGTTAAAATACCTTCTGCA
GGAGAGAGAGATCAGCGAAGCAGTTGGTTCGCGGCACCATTGAAACTTAGCTCAGAAATCTCAACTACCAAGTCTTGGCCGGACGGCAGCGGAGCCGCCGTACGTCTCTG
TTTACGACGGAAGGCCGGAGATTGGCGGCGAGATTCAGAGCGTAGCTGCCAGCTGAAAATTCGGCTACTCTTCCCTGTCGTTTACCATCAATCCTTCTCTTCTCTCTCCT
CTCTCGCTCTTTCTGAGCGTATTGGTCATTCTACAGGAGGGAGGAGAGTTCTGGTTTTGCAGCGGTTTATGTGTAATCGAGAGGAGATAAAGCATCGGAATGGAGAAATC
TGGGAATTTGAGCGAGAAATGTCCGGCGGAACAGGAGGAGTTGAAGACGTGATTCTTGGAATTGATGGAGGCACGACCTCCACCATCTGCGTTTGCGTTCCGTTCTTACA
ACCGCAGTCTCTCCACCTTCCTGATCCTCTTCCTCTTCTTGCCCGAGTCGAAGCCGGCTGCTCGAATCATAACAGCGTTGGCGGTACTCTCCCCCTCTCTCTCTCTCTGT
GCCTATCACTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGATCGAAGCTAAGAGGAACTTCGATTTCGATCTCGAAGATGACGACGATGAGGATTTCCTTTCTGAGGTGGCCGCGGCTGAAGCTCGTGCCCTCGCCGCTAAACG
CAGAAGAATCCCCAATCAAGCCTCCGATCCGCCCAAAAACGCTATCCCGGAGGTTGCGGACAAAGTTTCCCCTAATCCAGACGTGGAGGGACTCTACATCGCCGCTTTGA
AAGGAAACCCTACTTTTCTTTCTCAAATTTCAGGTGGGATAGCCAATTCGAGGGTGAAGCTCGTTGCTGCTGGCAACAAAGGGTTCATTTCTGCAAATCCTACTGCTCAA
TCGGAAGGTGGAGGCTCGTGTTTCAAATGCGGGAAATTAGGGCATTGGGCCAGAGACTGCGATGCTTCGGGAGGTGGTGGGTCTTTTGGCACTTCTGGGAATGATACGTC
CATTGCGGAGAAAGCATGCCCCTGCGGATTGGGAGTTTGTTTACTACTAACTGCGAATACGGAGAGGAATCGGGGTCGAAAATTTTACAAATGTCCTGTTCGACAGGAAA
ATGGTGGCTGCGGATTCTTTGAGTGGTGTGACAATGCTTCTGGAACTAATGTGATGACTTATGGAAGCCAAAATCGGGCATCAAGTTCATCATTTTCAGACCTTCCGTGC
CCCTGTGGTGCTGGTTCTTGCATAATTCTAACAGCCAAAACAGGGGAAAATGTTGGTCAGCAATTCTATCGTTGCCCTTCATACCAGGAAACTTGTGGGTTTTTCCAGTG
GTGCAGGGAGCCTCCCATAGCTGCCAAGAATCAAGTGAGTGCCTCTAAGGGCATTGGGCTAGAGATTGCTCGCAATCACATGCATCATCCAATCCTCCTGCAGAGTTGGG
GAGAAGTTCATCTTCATTTGGAACCTGTTTCAAATGCGGTAAGCCCGGCCATTGGGCGAGGGACTGTCCTAATTGTTAATAGTCACCTGACATTTTGCTTATTTTGCCCG
CCATCCATTGCTCCAGTTGACTGTGCCGCCAACAAGCAAATGAGAATCACATTCAAATGCTCAAATTCCGAGCACTCCTTCCCACAATCTCCAGGCGAGCATAACCAAGA
ACCATCGCCCAGCTTCCACGCCGAGTTCTTCGGACCGGTGCTCGACCGGACTACCGCCGGCGAACTATCTCCCCGGCGGCCGAAGCTTCCGACTCGCTGCTGTGGTTCGG
CTTCCGTGTCTTGGCGGAGCTTCACGACTGTGTACGCGGCTGCGCCGGCTACTGCTCCGGCGGTGGGCGCTACAATTGGCGACTGCAACAATGACGAACATGAGGACGAA
GGTGACGATGAACTCGATTACAAGCGCCCGGCAGGTGCCGACGGAGGGCACGGTGACGCCGCCGGACATGAACGGGTGGAAGACGGCCTTGAGGCTGAAAGCAGCGGAGA
TGGATCCAGAAATCTGAGCGCCGATGTAGAGCGGCAGGTGAAGCCATGGAAAGTGACGGAGAGCGGCGTAAGCTACGGTGACCGATGGATTCAAGTGAGCGCCGGAGATG
TGGCCGATGGAGAGGATTACGGCCATCACGGCCAGCCCAGCGCAGATCGCACTTGTTATCAGCCCGCTCTCCGTCGCCTGAAGGGACATGGAGTTAAAATACCTTCTGCA
GGAGAGAGAGATCAGCGAAGCAGTTGGTTCGCGGCACCATTGAAACTTAGCTCAGAAATCTCAACTACCAAGTCTTGGCCGGACGGCAGCGGAGCCGCCGTACGTCTCTG
TTTACGACGGAAGGCCGGAGATTGGCGGCGAGATTCAGAGCGTAGCTGCCAGCTGAAAATTCGGCTACTCTTCCCTGTCGTTTACCATCAATCCTTCTCTTCTCTCTCCT
CTCTCGCTCTTTCTGAGCGTATTGGTCATTCTACAGGAGGGAGGAGAGTTCTGGTTTTGCAGCGGTTTATGTGTAATCGAGAGGAGATAAAGCATCGGAATGGAGAAATC
TGGGAATTTGAGCGAGAAATGTCCGGCGGAACAGGAGGAGTTGAAGACGTGATTCTTGGAATTGATGGAGGCACGACCTCCACCATCTGCGTTTGCGTTCCGTTCTTACA
ACCGCAGTCTCTCCACCTTCCTGATCCTCTTCCTCTTCTTGCCCGAGTCGAAGCCGGCTGCTCGAATCATAACAGCGTTGGCGGTACTCTCCCCCTCTCTCTCTCTCTGT
GCCTATCACTTTCTTGA
Protein sequenceShow/hide protein sequence
MRIEAKRNFDFDLEDDDDEDFLSEVAAAEARALAAKRRRIPNQASDPPKNAIPEVADKVSPNPDVEGLYIAALKGNPTFLSQISGGIANSRVKLVAAGNKGFISANPTAQ
SEGGGSCFKCGKLGHWARDCDASGGGGSFGTSGNDTSIAEKACPCGLGVCLLLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASGTNVMTYGSQNRASSSSFSDLPC
PCGAGSCIILTAKTGENVGQQFYRCPSYQETCGFFQWCREPPIAAKNQVSASKGIGLEIARNHMHHPILLQSWGEVHLHLEPVSNAVSPAIGRGTVLIVNSHLTFCLFCP
PSIAPVDCAANKQMRITFKCSNSEHSFPQSPGEHNQEPSPSFHAEFFGPVLDRTTAGELSPRRPKLPTRCCGSASVSWRSFTTVYAAAPATAPAVGATIGDCNNDEHEDE
GDDELDYKRPAGADGGHGDAAGHERVEDGLEAESSGDGSRNLSADVERQVKPWKVTESGVSYGDRWIQVSAGDVADGEDYGHHGQPSADRTCYQPALRRLKGHGVKIPSA
GERDQRSSWFAAPLKLSSEISTTKSWPDGSGAAVRLCLRRKAGDWRRDSERSCQLKIRLLFPVVYHQSFSSLSSLALSERIGHSTGGRRVLVLQRFMCNREEIKHRNGEI
WEFEREMSGGTGGVEDVILGIDGGTTSTICVCVPFLQPQSLHLPDPLPLLARVEAGCSNHNSVGGTLPLSLSLCLSLS