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Sgr029846 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr029846
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionDNA ligase
Genome locationtig00153533:1969868..1971160
RNA-Seq ExpressionSgr029846
SyntenySgr029846
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0050896 - response to stimulus (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149862.1 DNA ligase 4 isoform X1 [Momordica charantia]3.2e-3842.11Show/hide
Query:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR
        L+S ID ETP ASE  ENQ+ISSP+N YKDQG+NEAASGQHMLL++TERSGGKK                                    E D       
Subjt:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR

Query:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS
        K        G  C                     KG+E     STE++GEKKR  RPT    AR MQKGKAG ++ +R + R A GSAKIG VESDSSD+
Subjt:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS

Query:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------
        TD+KTNAE  GVEK NIGT                         +EQ+D AE KS+V     PE+EI                                 
Subjt:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------

Query:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW
              + S+VLEEKQPV NNSEP KKKVSYKDVASELLKDW
Subjt:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW

XP_022149863.1 DNA ligase 4 isoform X2 [Momordica charantia]3.2e-3842.11Show/hide
Query:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR
        L+S ID ETP ASE  ENQ+ISSP+N YKDQG+NEAASGQHMLL++TERSGGKK                                    E D       
Subjt:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR

Query:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS
        K        G  C                     KG+E     STE++GEKKR  RPT    AR MQKGKAG ++ +R + R A GSAKIG VESDSSD+
Subjt:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS

Query:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------
        TD+KTNAE  GVEK NIGT                         +EQ+D AE KS+V     PE+EI                                 
Subjt:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------

Query:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW
              + S+VLEEKQPV NNSEP KKKVSYKDVASELLKDW
Subjt:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW

XP_022149864.1 DNA ligase 4 isoform X3 [Momordica charantia]3.2e-3842.11Show/hide
Query:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR
        L+S ID ETP ASE  ENQ+ISSP+N YKDQG+NEAASGQHMLL++TERSGGKK                                    E D       
Subjt:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR

Query:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS
        K        G  C                     KG+E     STE++GEKKR  RPT    AR MQKGKAG ++ +R + R A GSAKIG VESDSSD+
Subjt:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS

Query:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------
        TD+KTNAE  GVEK NIGT                         +EQ+D AE KS+V     PE+EI                                 
Subjt:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------

Query:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW
              + S+VLEEKQPV NNSEP KKKVSYKDVASELLKDW
Subjt:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW

XP_022149865.1 DNA ligase 4 isoform X4 [Momordica charantia]3.2e-3842.11Show/hide
Query:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR
        L+S ID ETP ASE  ENQ+ISSP+N YKDQG+NEAASGQHMLL++TERSGGKK                                    E D       
Subjt:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR

Query:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS
        K        G  C                     KG+E     STE++GEKKR  RPT    AR MQKGKAG ++ +R + R A GSAKIG VESDSSD+
Subjt:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS

Query:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------
        TD+KTNAE  GVEK NIGT                         +EQ+D AE KS+V     PE+EI                                 
Subjt:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------

Query:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW
              + S+VLEEKQPV NNSEP KKKVSYKDVASELLKDW
Subjt:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW

XP_022149866.1 DNA ligase 4 isoform X5 [Momordica charantia]3.2e-3842.11Show/hide
Query:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR
        L+S ID ETP ASE  ENQ+ISSP+N YKDQG+NEAASGQHMLL++TERSGGKK                                    E D       
Subjt:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR

Query:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS
        K        G  C                     KG+E     STE++GEKKR  RPT    AR MQKGKAG ++ +R + R A GSAKIG VESDSSD+
Subjt:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS

Query:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------
        TD+KTNAE  GVEK NIGT                         +EQ+D AE KS+V     PE+EI                                 
Subjt:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------

Query:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW
              + S+VLEEKQPV NNSEP KKKVSYKDVASELLKDW
Subjt:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW

TrEMBL top hitse value%identityAlignment
A0A6J1D6X8 DNA ligase1.5e-3842.11Show/hide
Query:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR
        L+S ID ETP ASE  ENQ+ISSP+N YKDQG+NEAASGQHMLL++TERSGGKK                                    E D       
Subjt:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR

Query:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS
        K        G  C                     KG+E     STE++GEKKR  RPT    AR MQKGKAG ++ +R + R A GSAKIG VESDSSD+
Subjt:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS

Query:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------
        TD+KTNAE  GVEK NIGT                         +EQ+D AE KS+V     PE+EI                                 
Subjt:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------

Query:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW
              + S+VLEEKQPV NNSEP KKKVSYKDVASELLKDW
Subjt:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW

A0A6J1D7W8 DNA ligase1.5e-3842.11Show/hide
Query:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR
        L+S ID ETP ASE  ENQ+ISSP+N YKDQG+NEAASGQHMLL++TERSGGKK                                    E D       
Subjt:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR

Query:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS
        K        G  C                     KG+E     STE++GEKKR  RPT    AR MQKGKAG ++ +R + R A GSAKIG VESDSSD+
Subjt:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS

Query:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------
        TD+KTNAE  GVEK NIGT                         +EQ+D AE KS+V     PE+EI                                 
Subjt:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------

Query:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW
              + S+VLEEKQPV NNSEP KKKVSYKDVASELLKDW
Subjt:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW

A0A6J1D8A6 DNA ligase1.5e-3842.11Show/hide
Query:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR
        L+S ID ETP ASE  ENQ+ISSP+N YKDQG+NEAASGQHMLL++TERSGGKK                                    E D       
Subjt:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR

Query:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS
        K        G  C                     KG+E     STE++GEKKR  RPT    AR MQKGKAG ++ +R + R A GSAKIG VESDSSD+
Subjt:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS

Query:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------
        TD+KTNAE  GVEK NIGT                         +EQ+D AE KS+V     PE+EI                                 
Subjt:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------

Query:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW
              + S+VLEEKQPV NNSEP KKKVSYKDVASELLKDW
Subjt:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW

A0A6J1D962 DNA ligase1.5e-3842.11Show/hide
Query:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR
        L+S ID ETP ASE  ENQ+ISSP+N YKDQG+NEAASGQHMLL++TERSGGKK                                    E D       
Subjt:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR

Query:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS
        K        G  C                     KG+E     STE++GEKKR  RPT    AR MQKGKAG ++ +R + R A GSAKIG VESDSSD+
Subjt:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS

Query:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------
        TD+KTNAE  GVEK NIGT                         +EQ+D AE KS+V     PE+EI                                 
Subjt:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------

Query:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW
              + S+VLEEKQPV NNSEP KKKVSYKDVASELLKDW
Subjt:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW

A0A6J1D9Q4 DNA ligase IV1.5e-3842.11Show/hide
Query:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR
        L+S ID ETP ASE  ENQ+ISSP+N YKDQG+NEAASGQHMLL++TERSGGKK                                    E D       
Subjt:  LSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKK------------------------------------EEDLPQGGSR

Query:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS
        K        G  C                     KG+E     STE++GEKKR  RPT    AR MQKGKAG ++ +R + R A GSAKIG VESDSSD+
Subjt:  K--------GIRC---------------------KGLEQY---STEKSGEKKR-ERPT----ARRMQKGKAGGKKVRRIQPRIAMGSAKIGEVESDSSDS

Query:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------
        TD+KTNAE  GVEK NIGT                         +EQ+D AE KS+V     PE+EI                                 
Subjt:  TDEKTNAEA-GVEKANIGT------------------------AVEQNDPAELKSDVQFGKFPEVEI---------------------------------

Query:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW
              + S+VLEEKQPV NNSEP KKKVSYKDVASELLKDW
Subjt:  ------AESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTCATCCTAGGGAAGCCCTTAAGTTCTGGCATAGATTTGGAGACACCATGGGCCTCTGAAGGTATAGAAAACCAGCAAATTTCCTCTCCAGCCAATGAGTATAA
GGATCAAGGAAAAAATGAAGCTGCTTCAGGACAACACATGCTCTTATATGCAACTGAGAGATCTGGTGGAAAGAAAGAAGAAGACCTACCACAAGGAGGATCCAGAAAGG
GAATCAGGTGTAAGGGCCTTGAACAATATTCAACTGAGAAATCTGGTGAAAAGAAAAGAGAAAGGCCTACTGCAAGGAGAATGCAGAAAGGGAAAGCAGGCGGCAAAAAA
GTTCGAAGAATTCAGCCACGTATTGCCATGGGGTCTGCAAAAATAGGTGAAGTTGAGTCAGACAGTAGTGACTCTACTGACGAGAAAACAAATGCAGAAGCTGGAGTGGA
GAAAGCAAATATTGGAACAGCCGTTGAACAAAATGATCCTGCAGAGTTGAAATCTGATGTTCAGTTTGGTAAATTTCCAGAAGTTGAAATAGCTGAAAGTTCTGTTCTTG
AGGAGAAGCAACCAGTTCATAACAATTCTGAGCCAGCTAAGAAGAAAGTGAGCTACAAGGACGTTGCCAGTGAGCTCCTCAAGGATTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTCATCCTAGGGAAGCCCTTAAGTTCTGGCATAGATTTGGAGACACCATGGGCCTCTGAAGGTATAGAAAACCAGCAAATTTCCTCTCCAGCCAATGAGTATAA
GGATCAAGGAAAAAATGAAGCTGCTTCAGGACAACACATGCTCTTATATGCAACTGAGAGATCTGGTGGAAAGAAAGAAGAAGACCTACCACAAGGAGGATCCAGAAAGG
GAATCAGGTGTAAGGGCCTTGAACAATATTCAACTGAGAAATCTGGTGAAAAGAAAAGAGAAAGGCCTACTGCAAGGAGAATGCAGAAAGGGAAAGCAGGCGGCAAAAAA
GTTCGAAGAATTCAGCCACGTATTGCCATGGGGTCTGCAAAAATAGGTGAAGTTGAGTCAGACAGTAGTGACTCTACTGACGAGAAAACAAATGCAGAAGCTGGAGTGGA
GAAAGCAAATATTGGAACAGCCGTTGAACAAAATGATCCTGCAGAGTTGAAATCTGATGTTCAGTTTGGTAAATTTCCAGAAGTTGAAATAGCTGAAAGTTCTGTTCTTG
AGGAGAAGCAACCAGTTCATAACAATTCTGAGCCAGCTAAGAAGAAAGTGAGCTACAAGGACGTTGCCAGTGAGCTCCTCAAGGATTGGTAA
Protein sequenceShow/hide protein sequence
MFVILGKPLSSGIDLETPWASEGIENQQISSPANEYKDQGKNEAASGQHMLLYATERSGGKKEEDLPQGGSRKGIRCKGLEQYSTEKSGEKKRERPTARRMQKGKAGGKK
VRRIQPRIAMGSAKIGEVESDSSDSTDEKTNAEAGVEKANIGTAVEQNDPAELKSDVQFGKFPEVEIAESSVLEEKQPVHNNSEPAKKKVSYKDVASELLKDW