; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr030005 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr030005
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionDNA-directed RNA polymerase III subunit rpc4-like
Genome locationtig00153554:2028453..2032997
RNA-Seq ExpressionSgr030005
SyntenySgr030005
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0006412 - translation (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007811 - DNA-directed RNA polymerase III subunit RPC4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044650.1 DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo var. makuwa]1.3e-13073.28Show/hide
Query:  MENPDPSPPRRKVKFAPKGTPRKRPPPVP--KTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNS
        M+N D SPPRRKVKFAPK + R+RPPP P  KTEDEDG+   AQT+ LLRRA ENLGKR NKVE+KSSVQVAFGPGA S SSSIRTYGVPKV N SRKN 
Subjt:  MENPDPSPPRRKVKFAPKGTPRKRPPPVP--KTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNS

Query:  IEPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQ
        IEPEV +DEE +LP+ MD+ EDG  FDKK +DG ++SS   ++A+VTKTK+DYKEPW+Y +SYYP TLPLR                   + LD+AEFGQ
Subjt:  IEPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQ

Query:  DAMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV
        DAM+REYDE++VIPALDLGL +EN   T YFFQLPARLPLPKQSS ATGKEKVG SRSSNST +S+L DLKKL+ GCMGKLLIYKSGAIKLRLGD LYDV
Subjt:  DAMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV

Query:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL
        SSGSDCSF QHVVAINTE+GQCCDLGDIGKRVVVTPDISSLLNSVT+L
Subjt:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL

XP_008453902.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo]3.5e-13173.56Show/hide
Query:  MENPDPSPPRRKVKFAPKGTPRKRPPPVP--KTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNS
        M+N D SPPRRKVKFAPK + R+RPPP P  KTEDEDG+   AQT+ LLRRA ENLGKR NKVEKKSSVQVAFGPGA S SSSIRTYGVPKV N SRKN 
Subjt:  MENPDPSPPRRKVKFAPKGTPRKRPPPVP--KTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNS

Query:  IEPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQ
        IEPEV +DEE +LP+ MD+ EDG  FDKK +DG ++SS   ++A+VTKTK+DYKEPW+Y +SYYP TLPLR                   + LD+AEFGQ
Subjt:  IEPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQ

Query:  DAMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV
        DAM+REYDE++VIPALDLGL +EN   T YFFQLPARLPLPKQSS ATGKEKVG SRSSNST +S+L DLKKL+ GCMGKLLIYKSGAIKLRLGD LYDV
Subjt:  DAMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV

Query:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL
        SSGSDCSF QHVVAINTE+GQCCDLGDIGKRVVVTPDISSLLNSVT+L
Subjt:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL

XP_022141050.1 DNA-directed RNA polymerase III subunit RPC4-like isoform X1 [Momordica charantia]2.2e-14178.67Show/hide
Query:  MENPDPSP-PRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSI
        M+NPDPS  PRRKVKFAPK TPRKRPPP PK EDEDG++NAAQT+ LLRRATENLGKRG KVEKK SVQVAFGPGAAS SSSIRTYGVPKV NSSRKN+I
Subjt:  MENPDPSP-PRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSI

Query:  EPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQD
        EPE++DDEESILPLP+D+EEDG IFD+K+EDGT +S++ATNA V+TK KKDY+EPW+YHHSYYPNTLPLR      + Y          +LLDKAEFG D
Subjt:  EPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQD

Query:  AMDREYDEDTVIPALDLGLL-EENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV
        A DREYDE+  IPALDL LL EE   KTMYFFQLPA LPLPKQSS AT KEKVG SRSSNS GTSELGDLKKL GG MGKLLIYKSGA+KLRLG+TLYDV
Subjt:  AMDREYDEDTVIPALDLGLL-EENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV

Query:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTD
        SSGS+CSF QHVVAINTEEG CCDLGD+GKRVVVTPDISSLLN+VTD
Subjt:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTD

XP_022141051.1 DNA-directed RNA polymerase III subunit RPC4-like isoform X2 [Momordica charantia]9.0e-14378.9Show/hide
Query:  MENPDPSP-PRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSI
        M+NPDPS  PRRKVKFAPK TPRKRPPP PK EDEDG++NAAQT+ LLRRATENLGKRG KVEKK SVQVAFGPGAAS SSSIRTYGVPKV NSSRKN+I
Subjt:  MENPDPSP-PRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSI

Query:  EPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQD
        EPE++DDEESILPLP+D+EEDG IFD+K+EDGT +S++ATNA V+TK KKDY+EPW+YHHSYYPNTLPLR      + Y          +LLDKAEFG D
Subjt:  EPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQD

Query:  AMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVS
        A DREYDE+  IPALDL LLEE   KTMYFFQLPA LPLPKQSS AT KEKVG SRSSNS GTSELGDLKKL GG MGKLLIYKSGA+KLRLG+TLYDVS
Subjt:  AMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVS

Query:  SGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTD
        SGS+CSF QHVVAINTEEG CCDLGD+GKRVVVTPDISSLLN+VTD
Subjt:  SGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTD

XP_038879339.1 DNA-directed RNA polymerase III subunit rpc4-like [Benincasa hispida]3.0e-13876.08Show/hide
Query:  MENPDPSPPRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSIE
        M+NPD SPPRRKVKFAPK  PR+RPPPV K EDEDGD   AQT+ LLRRATENLGKRGNKV++KSSVQVAFGPGAAS SSSIRTYGVPKV NSSRKN IE
Subjt:  MENPDPSPPRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSIE

Query:  PEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQDA
        P+V +DEE ILPLPMD+EE+G IFDKK +DG ++SS   ++A+VTKTKKDYKEPW+YH+S YP TLP+R                   + LD+AEFGQDA
Subjt:  PEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQDA

Query:  MDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSS
         DREYDED+VIPALDLGLL+E    T YFFQLPARLPLPKQSS ATGKEKVG  RSS S G+SELGDLKKL+ GCMGKLLIYKSGAIKLRLGDTLYDVSS
Subjt:  MDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSS

Query:  GSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDLG
        GSDCSF QHVVAINT+EGQCCDLGDIGKRV+VTPDISSLLNS+T+LG
Subjt:  GSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDLG

TrEMBL top hitse value%identityAlignment
A0A0A0KZ61 Uncharacterized protein1.5e-13073.28Show/hide
Query:  MENPDPSPPRRKVKFAPKGTPRKRPPPVP--KTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNS
        M+N DPSPPRRKVKFAPK + RKRPPP P  KTEDEDG+   AQT+ LLRRA ENLGKR NKVEKKSSVQVAFGPGA S SSSIRTYGVPKV N SRKN 
Subjt:  MENPDPSPPRRKVKFAPKGTPRKRPPPVP--KTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNS

Query:  IEPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQ
        IEPEV +DEE +LP+  D+ EDG  FDKK +DG ++SS   ++A+ TKTK+DYKEPW+Y +SYYP TLPLR                   + LD+AEFGQ
Subjt:  IEPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQ

Query:  DAMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV
        D M+REYDE++VIPALDLGLL+EN   T YFFQLPARLPLPKQSS ATGKEKVG SRSSNST +S+L DLKKL+ GCMGKLLIYKSGAIKLRLGD LYDV
Subjt:  DAMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV

Query:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL
        SSGS+CSF QHVVAINTEEGQCCDLGDIG RVVVTPDISSLLNSVT+L
Subjt:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL

A0A1S3BYJ9 DNA-directed RNA polymerase III subunit rpc4-like1.7e-13173.56Show/hide
Query:  MENPDPSPPRRKVKFAPKGTPRKRPPPVP--KTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNS
        M+N D SPPRRKVKFAPK + R+RPPP P  KTEDEDG+   AQT+ LLRRA ENLGKR NKVEKKSSVQVAFGPGA S SSSIRTYGVPKV N SRKN 
Subjt:  MENPDPSPPRRKVKFAPKGTPRKRPPPVP--KTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNS

Query:  IEPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQ
        IEPEV +DEE +LP+ MD+ EDG  FDKK +DG ++SS   ++A+VTKTK+DYKEPW+Y +SYYP TLPLR                   + LD+AEFGQ
Subjt:  IEPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQ

Query:  DAMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV
        DAM+REYDE++VIPALDLGL +EN   T YFFQLPARLPLPKQSS ATGKEKVG SRSSNST +S+L DLKKL+ GCMGKLLIYKSGAIKLRLGD LYDV
Subjt:  DAMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV

Query:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL
        SSGSDCSF QHVVAINTE+GQCCDLGDIGKRVVVTPDISSLLNSVT+L
Subjt:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL

A0A5A7TN83 DNA-directed RNA polymerase III subunit rpc4-like6.5e-13173.28Show/hide
Query:  MENPDPSPPRRKVKFAPKGTPRKRPPPVP--KTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNS
        M+N D SPPRRKVKFAPK + R+RPPP P  KTEDEDG+   AQT+ LLRRA ENLGKR NKVE+KSSVQVAFGPGA S SSSIRTYGVPKV N SRKN 
Subjt:  MENPDPSPPRRKVKFAPKGTPRKRPPPVP--KTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNS

Query:  IEPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQ
        IEPEV +DEE +LP+ MD+ EDG  FDKK +DG ++SS   ++A+VTKTK+DYKEPW+Y +SYYP TLPLR                   + LD+AEFGQ
Subjt:  IEPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQ

Query:  DAMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV
        DAM+REYDE++VIPALDLGL +EN   T YFFQLPARLPLPKQSS ATGKEKVG SRSSNST +S+L DLKKL+ GCMGKLLIYKSGAIKLRLGD LYDV
Subjt:  DAMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV

Query:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL
        SSGSDCSF QHVVAINTE+GQCCDLGDIGKRVVVTPDISSLLNSVT+L
Subjt:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL

A0A6J1CGV5 DNA-directed RNA polymerase III subunit RPC4-like isoform X11.1e-14178.67Show/hide
Query:  MENPDPSP-PRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSI
        M+NPDPS  PRRKVKFAPK TPRKRPPP PK EDEDG++NAAQT+ LLRRATENLGKRG KVEKK SVQVAFGPGAAS SSSIRTYGVPKV NSSRKN+I
Subjt:  MENPDPSP-PRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSI

Query:  EPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQD
        EPE++DDEESILPLP+D+EEDG IFD+K+EDGT +S++ATNA V+TK KKDY+EPW+YHHSYYPNTLPLR      + Y          +LLDKAEFG D
Subjt:  EPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQD

Query:  AMDREYDEDTVIPALDLGLL-EENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV
        A DREYDE+  IPALDL LL EE   KTMYFFQLPA LPLPKQSS AT KEKVG SRSSNS GTSELGDLKKL GG MGKLLIYKSGA+KLRLG+TLYDV
Subjt:  AMDREYDEDTVIPALDLGLL-EENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDV

Query:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTD
        SSGS+CSF QHVVAINTEEG CCDLGD+GKRVVVTPDISSLLN+VTD
Subjt:  SSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTD

A0A6J1CHV0 DNA-directed RNA polymerase III subunit RPC4-like isoform X24.3e-14378.9Show/hide
Query:  MENPDPSP-PRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSI
        M+NPDPS  PRRKVKFAPK TPRKRPPP PK EDEDG++NAAQT+ LLRRATENLGKRG KVEKK SVQVAFGPGAAS SSSIRTYGVPKV NSSRKN+I
Subjt:  MENPDPSP-PRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSI

Query:  EPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQD
        EPE++DDEESILPLP+D+EEDG IFD+K+EDGT +S++ATNA V+TK KKDY+EPW+YHHSYYPNTLPLR      + Y          +LLDKAEFG D
Subjt:  EPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQD

Query:  AMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVS
        A DREYDE+  IPALDL LLEE   KTMYFFQLPA LPLPKQSS AT KEKVG SRSSNS GTSELGDLKKL GG MGKLLIYKSGA+KLRLG+TLYDVS
Subjt:  AMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVS

Query:  SGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTD
        SGS+CSF QHVVAINTEEG CCDLGD+GKRVVVTPDISSLLN+VTD
Subjt:  SGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTD

SwissProt top hitse value%identityAlignment
P05423 DNA-directed RNA polymerase III subunit RPC42.0e-0741.56Show/hide
Query:  LKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDCSFAQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN
        L  LT G +GKLLI KSG ++L LG    DV+ G+ CSF Q +V++   ++  G+   LG +  ++V +PD  SLL+
Subjt:  LKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDCSFAQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN

P25441 DNA-directed RNA polymerase III subunit RPC41.2e-0425.14Show/hide
Query:  LYFFLERNSRKLLDK-AEFGQDAMDREYDE-DTVIPALDLGLLE-------------ENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNS----
        L  +LE   R++ +K A+ G   +++E+   D    A +L LL               N  +    FQLP RLP  ++ +    KE +    S  S    
Subjt:  LYFFLERNSRKLLDK-AEFGQDAMDREYDE-DTVIPALDLGLLE-------------ENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNS----

Query:  ----TGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDCSFAQHVVAIN-TEEGQCCD-LGDIGKRVVVTPDI
              T +    ++L G  +G + ++KSG + +++G+ + D+  G++ +F Q V+A++  ++    + LG +  ++VVTP I
Subjt:  ----TGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDCSFAQHVVAIN-TEEGQCCD-LGDIGKRVVVTPDI

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC47.4e-0741.56Show/hide
Query:  LKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDCSFAQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN
        L  LT G +GKLLI KSG ++L LG    DV+ G+ CSF Q +V++   ++  G    LG I  ++V +P+  SLL+
Subjt:  LKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDCSFAQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN

Q8T1V7 DNA-directed RNA polymerase III subunit rpc44.5e-0435.06Show/hide
Query:  LKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDCSFAQHVVAINTEEG-----QCCDLGDIGKRVVVTPDISSL
        +K++  G +G L IYKSG   L++G   YD+SSG    F + V    T+ G      C  LG   + +V  P IS +
Subjt:  LKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDCSFAQHVVAINTEEG-----QCCDLGDIGKRVVVTPDISSL

Q91WD1 DNA-directed RNA polymerase III subunit RPC41.5e-0741.56Show/hide
Query:  LKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDCSFAQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN
        L  LT G +GKLLI KSG ++L LG    DV+ G+ CSF Q +V++   ++  G+   LG +  ++V +PD  SLL+
Subjt:  LKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDCSFAQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC42.2e-3836.13Show/hide
Query:  PSPPRRKVKFAPKGTPRKRPP--PVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSIEPEV
        P+PPR          P +R P  P   TE E+ +EN   ++   RR    +G+R     K SS +VAF P  + +  +IR++GVPK  +    + + P  
Subjt:  PSPPRRKVKFAPKGTPRKRPP--PVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSIEPEV

Query:  ADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSR--KLLDKAEFGQDAM
             SILP    +           EDG    +       VT+T  DY EPW+Y +SYYP  LPLR              + NS   +LLD+ EFG+ A 
Subjt:  ADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSR--KLLDKAEFGQDAM

Query:  DREYDEDTVIPALDLGLLE-ENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSS
        +R+YDE+T+  A +LGL   ++  K M+ F++P  LP+ KQ++ AT K  V       S+G S     + L  G MGK+L+YKSGA+KL++GD L+DVS 
Subjt:  DREYDEDTVIPALDLGLLE-ENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSS

Query:  GSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL
        G        VVAI+ +   C  +G   K V VTPD+ SLLN  +D+
Subjt:  GSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL

AT5G09380.1 RNA polymerase III RPC43.0e-3533.33Show/hide
Query:  DPSPPRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSIEPEVA
        +  PP RK+KFAPK  P++ P P  K E  + + N+AQ   LLRR  E   ++    +K  + QVA+  G               V+NS+R N       
Subjt:  DPSPPRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGKRGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSIEPEVA

Query:  DDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQDAMDRE
                               N    +  S +T        + +YKEPW+Y +SYYP TLP+R      + Y          ++LD  EF Q      
Subjt:  DDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTLPLRCLTLETQVYLYFFLERNSRKLLDKAEFGQDAMDRE

Query:  YDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDC
        + ED++  A +LGL+E++  + M+F +LP+ +PL     A+T  E +    +       +  DLK L  G MGKLL+YKSGA+K++LG+ LYDVS G   
Subjt:  YDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDC

Query:  SFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL
         FAQ V+ +NTE+  CC +GD+ K  V+TPDI S+L  + ++
Subjt:  SFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATCTCACCACCAAAACGCCGTTGTTTCGGGCCAAAGATCCCTACACCTTTTACTACCCGACTCTGGAAGGCATCTCCGTCGGAAAACACGGTTCGAACCTCCAT
TTTTATCTTTTTCACCATTTCCCCCCTTCCCCTTGTCTTCAACCTCGACCTCATGGAGAATCCCGATCCATCTCCTCCACGCCGAAAGGTCAAATTCGCCCCGAAAGGCA
CACCACGCAAAAGGCCACCCCCCGTACCAAAAACCGAAGACGAAGATGGCGATGAAAATGCTGCCCAAACGCAGTCTCTCTTACGCCGCGCCACCGAGAATCTTGGGAAA
CGTGGGAACAAGGTCGAGAAAAAATCTTCAGTGCAAGTTGCATTCGGTCCTGGTGCGGCATCGGTATCATCTTCCATAAGAACATATGGAGTTCCCAAAGTGATAAACAG
TAGTAGAAAAAATAGCATTGAGCCTGAAGTTGCTGACGATGAGGAATCTATCTTGCCTCTGCCTATGGATATCGAAGAAGATGGGACGATCTTCGATAAAAAAAACGAAG
ATGGAACATCGAAATCCTCTATAGCTACCAATGCTGCTGTAGTAACCAAGACCAAGAAGGATTACAAAGAACCTTGGGAGTACCATCATTCTTACTATCCTAATACGCTT
CCTCTACGATGCCTTACTCTGGAGACCCAGGTATACCTCTATTTTTTCCTGGAGAGGAATAGCAGAAAACTACTTGATAAAGCTGAGTTCGGGCAGGATGCGATGGATAG
GGAGTATGACGAGGACACTGTAATACCTGCCTTAGATCTTGGATTGCTGGAGGAAAATGTGGGGAAGACTATGTACTTTTTTCAGCTTCCTGCCCGTCTTCCTTTACCCA
AACAATCATCTGCTGCAACAGGAAAGGAGAAAGTAGGATGTTCGAGATCTTCAAACAGCACGGGCACATCAGAGCTCGGTGATCTGAAGAAACTGACTGGTGGATGCATG
GGGAAACTACTGATATACAAGAGTGGAGCTATTAAGTTGAGGCTAGGAGATACTCTTTACGACGTTTCTTCTGGTTCAGACTGCAGTTTTGCTCAACATGTTGTGGCAAT
CAACACAGAAGAGGGACAGTGCTGTGATCTAGGAGATATTGGCAAACGAGTTGTCGTGACGCCCGATATTAGTTCCCTCTTGAATTCAGTGACTGACTTGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAATCTCACCACCAAAACGCCGTTGTTTCGGGCCAAAGATCCCTACACCTTTTACTACCCGACTCTGGAAGGCATCTCCGTCGGAAAACACGGTTCGAACCTCCAT
TTTTATCTTTTTCACCATTTCCCCCCTTCCCCTTGTCTTCAACCTCGACCTCATGGAGAATCCCGATCCATCTCCTCCACGCCGAAAGGTCAAATTCGCCCCGAAAGGCA
CACCACGCAAAAGGCCACCCCCCGTACCAAAAACCGAAGACGAAGATGGCGATGAAAATGCTGCCCAAACGCAGTCTCTCTTACGCCGCGCCACCGAGAATCTTGGGAAA
CGTGGGAACAAGGTCGAGAAAAAATCTTCAGTGCAAGTTGCATTCGGTCCTGGTGCGGCATCGGTATCATCTTCCATAAGAACATATGGAGTTCCCAAAGTGATAAACAG
TAGTAGAAAAAATAGCATTGAGCCTGAAGTTGCTGACGATGAGGAATCTATCTTGCCTCTGCCTATGGATATCGAAGAAGATGGGACGATCTTCGATAAAAAAAACGAAG
ATGGAACATCGAAATCCTCTATAGCTACCAATGCTGCTGTAGTAACCAAGACCAAGAAGGATTACAAAGAACCTTGGGAGTACCATCATTCTTACTATCCTAATACGCTT
CCTCTACGATGCCTTACTCTGGAGACCCAGGTATACCTCTATTTTTTCCTGGAGAGGAATAGCAGAAAACTACTTGATAAAGCTGAGTTCGGGCAGGATGCGATGGATAG
GGAGTATGACGAGGACACTGTAATACCTGCCTTAGATCTTGGATTGCTGGAGGAAAATGTGGGGAAGACTATGTACTTTTTTCAGCTTCCTGCCCGTCTTCCTTTACCCA
AACAATCATCTGCTGCAACAGGAAAGGAGAAAGTAGGATGTTCGAGATCTTCAAACAGCACGGGCACATCAGAGCTCGGTGATCTGAAGAAACTGACTGGTGGATGCATG
GGGAAACTACTGATATACAAGAGTGGAGCTATTAAGTTGAGGCTAGGAGATACTCTTTACGACGTTTCTTCTGGTTCAGACTGCAGTTTTGCTCAACATGTTGTGGCAAT
CAACACAGAAGAGGGACAGTGCTGTGATCTAGGAGATATTGGCAAACGAGTTGTCGTGACGCCCGATATTAGTTCCCTCTTGAATTCAGTGACTGACTTGGGATGA
Protein sequenceShow/hide protein sequence
MPISPPKRRCFGPKIPTPFTTRLWKASPSENTVRTSIFIFFTISPLPLVFNLDLMENPDPSPPRRKVKFAPKGTPRKRPPPVPKTEDEDGDENAAQTQSLLRRATENLGK
RGNKVEKKSSVQVAFGPGAASVSSSIRTYGVPKVINSSRKNSIEPEVADDEESILPLPMDIEEDGTIFDKKNEDGTSKSSIATNAAVVTKTKKDYKEPWEYHHSYYPNTL
PLRCLTLETQVYLYFFLERNSRKLLDKAEFGQDAMDREYDEDTVIPALDLGLLEENVGKTMYFFQLPARLPLPKQSSAATGKEKVGCSRSSNSTGTSELGDLKKLTGGCM
GKLLIYKSGAIKLRLGDTLYDVSSGSDCSFAQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTDLG