; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr030405 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr030405
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionDNA-directed RNA polymerase subunit beta
Genome locationtig00153640:3326598..3330167
RNA-Seq ExpressionSgr030405
SyntenySgr030405
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB3502390.1 unnamed protein product [Digitaria exilis]6.1e-1127.27Show/hide
Query:  QPAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAHVH-----------IDGAVDVLNHDDRPIRRLNKKRSELGVVG--NFSKLQIVHIITEKIR
        +PA   H  VD V      E +  L     G  P     H              +  V+VL+ D+RP   + ++R+E+   G     ++ +V +++E+ R
Subjt:  QPAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAHVH-----------IDGAVDVLNHDDRPIRRLNKKRSELGVVG--NFSKLQIVHIITEKIR

Query:  HCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRRVSKRHGDPPRFIGAAAMAVVGEKPPLPGDSLELLRRGRNVI
        H   +   + +GG ++QV   P AA + +      EG ++  D  L+LG+     +R RV +  G PPR   AAA   VG +P LP   L L+  G +V+
Subjt:  HCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRRVSKRHGDPPRFIGAAAMAVVGEKPPLPGDSLELLRRGRNVI

Query:  EIQREKLVATVAIEGVVNSVVRGDGEGDPIGGFGAGESEAAA
        ++  +             +VV  D E + +G  G G  EA A
Subjt:  EIQREKLVATVAIEGVVNSVVRGDGEGDPIGGFGAGESEAAA

GER27960.1 DNA-directed RNA polymerase subunit beta' [Striga asiatica]7.0e-1541.84Show/hide
Query:  IDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITEKIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSF
        I+GAVDVLN++DR  RR++KK  ELGVV + S+L+IVH++ EKI H     R +    P ++V  FP  ++  I +L   E  +I+ D++L  G+ GQS 
Subjt:  IDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITEKIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSF

Query:  KRRRVSKRHGDP-PRFIGAAAMAVVGEKPPLP---GDSLEL
        +  RV + H  P  R + AA   VVG + P P   GD L L
Subjt:  KRRRVSKRHGDP-PRFIGAAAMAVVGEKPPLP---GDSLEL

PON69208.1 hypothetical protein PanWU01x14_089310, partial [Parasponia andersonii]9.5e-1242.28Show/hide
Query:  VLPRRRIPIFRRTHHQHALRRP-----HYASRFFIFRRRLLSTTAAGQNPRLQGGDHLPHGDVGVPPVPQQNLPDLSRRQPAAGPHAAVDHVEQRMRVEP
        +LPRRR+PI RR   Q  LRRP     H    F +     L    + Q PRL G  HLPH  + + P+PQQ L D+ R +  A PHAAV  + QR+  + 
Subjt:  VLPRRRIPIFRRTHHQHALRRP-----HYASRFFIFRRRLLSTTAAGQNPRLQGGDHLPHGDVGVPPVPQQNLPDLSRRQPAAGPHAAVDHVEQRMRVEP

Query:  QIVLDQRSE--GVRPARAEAHVH
        Q+VL Q SE  G   A A+  VH
Subjt:  QIVLDQRSE--GVRPARAEAHVH

PON75966.1 hypothetical protein PanWU01x14_039170 [Parasponia andersonii]4.8e-1633.14Show/hide
Query:  PVPQQNLPDLSRRQPAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAHV---HIDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITE
        PV +   P    R PAA   A +       R  P +  D R +   P           +DGAVDVL++DD    RL+++  EL V  +  +LQIV ++ E
Subjt:  PVPQQNLPDLSRRQPAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAHV---HIDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITE

Query:  KIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRRVSKRHGDP---PRFIGAAA-------------------
        ++RHC D AR     G +++V   P  A   ++ L  GE  ++L      +G+ G+  +   V + HG P   P   GAA                    
Subjt:  KIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRRVSKRHGDP---PRFIGAAA-------------------

Query:  ---MAVVGEKP---PLPGDSLE--LLRRGRNVIEIQREKLVATV------AIEGVVNSVVRGDGEGDPIGGFGAGESEAAAGGGGGVEGVEVEGDMAVEV
           + V GE     PLP    E  L+ R R+  E     L   V      A+EG+ + V+ G+ EGD  G  GA ++EAAA  GGG  G EVE D  VE+
Subjt:  ---MAVVGEKP---PLPGDSLE--LLRRGRNVIEIQREKLVATV------AIEGVVNSVVRGDGEGDPIGGFGAGESEAAAGGGGGVEGVEVEGDMAVEV

Query:  VEVDGAVAVELGDVEV---GEGSEEILKGVVEG-VEEREEVGGEEVLEDGEEA
        V VD   AV+L  VEV   GE  E++++ +  G  E R E G EE L +GE+A
Subjt:  VEVDGAVAVELGDVEV---GEGSEEILKGVVEG-VEEREEVGGEEVLEDGEEA

PON97916.1 hypothetical protein TorRG33x02_062310 [Trema orientale]2.8e-1633.33Show/hide
Query:  PVPQQNLPDLSRRQPAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAH------VHIDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHI
        PV +   P    R PAA   A +       R  P +  D R E   PA A A         +DGAVDVL+ DD    RL+++  EL V  +  +LQIV +
Subjt:  PVPQQNLPDLSRRQPAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAH------VHIDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHI

Query:  ITEKIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRRVSKRHGDP---PRFIGAAAMAVVGEK---------
        + E++RHC D AR     G +++V   P  A+  ++ L  GE  +++    L +G+ G+  +   V + HG P   P   GAAA   V E          
Subjt:  ITEKIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRRVSKRHGDP---PRFIGAAAMAVVGEK---------

Query:  PPLPGDSLELLRRGRNVIEI---------------QREKLVATV----------AIEGVVNSVVRGDGEGDPIGGFGAGESEAAAGGGGGVEGVEVEGDM
         PL GD +E+      ++ +                RE L   +          A+EGV + V+ G+ EGD     GA ++EAAA  GGG  G EVE D 
Subjt:  PPLPGDSLELLRRGRNVIEI---------------QREKLVATV----------AIEGVVNSVVRGDGEGDPIGGFGAGESEAAAGGGGGVEGVEVEGDM

Query:  AVEVVEVDGAVAVELGDVEV---GEGSEEILKGVVEG-VEEREEVGGEEVLEDGEEA
         VE+V VD   AV+L  VEV   GE  E++++ +  G  E R E G EE L +GE+A
Subjt:  AVEVVEVDGAVAVELGDVEV---GEGSEEILKGVVEG-VEEREEVGGEEVLEDGEEA

TrEMBL top hitse value%identityAlignment
A0A0A0L9K8 Uncharacterized protein9.5e-1841.8Show/hide
Query:  PAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAHVHIDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITEKIRHCSDQARFSRSGGP
        P   P +     + R R  P ++L   +   R  R      ++  +++ NH+ RP+RRLNKKR++L ++ N  + QI+HI+ E+IRHC +QARF RS   
Subjt:  PAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAHVHIDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITEKIRHCSDQARFSRSGGP

Query:  IKQVPTFPRAANSAIKLLPAGE
        IKQ+PTFP  ANS IKL P G+
Subjt:  IKQVPTFPRAANSAIKLLPAGE

A0A1D1YTK9 Uncharacterized protein (Fragment)5.2e-1633.33Show/hide
Query:  VDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITEKIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRR
        V+VL+HDDRP  RL ++  E+G V +  ++Q+V ++ E++ H   +A  + +GGP+++V   P AA + +  L   EG ++  D +L++GL     +RRR
Subjt:  VDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITEKIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRR

Query:  VSKRHGDPPRFIGAAAMAVVGEKPPLPGDSLELLRRGRNVIEIQREK----LVATVAIEGVVNSVVRGDG---EGDPIG-------------------GF
        V + H  PP    AA + V  EK  LP   L+L+  G +V+E+  E     L A    EG V  V  GDG   EG P G                   G 
Subjt:  VSKRHGDPPRFIGAAAMAVVGEKPPLPGDSLELLRRGRNVIEIQREK----LVATVAIEGVVNSVVRGDG---EGDPIG-------------------GF

Query:  GAGESEAAAGGGGGVEGVEVEGDMAVEVVEVDGAVAVELGDVEVGEGSEEILKGVVEGVEEREE-VGGEEVLE
        G GE     G   G EG +V G  AVE V +   V    GD+ V    E +L        +RE+  GGE  L+
Subjt:  GAGESEAAAGGGGGVEGVEVEGDMAVEVVEVDGAVAVELGDVEVGEGSEEILKGVVEGVEEREE-VGGEEVLE

A0A2P5DRP6 Uncharacterized protein2.3e-1633.14Show/hide
Query:  PVPQQNLPDLSRRQPAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAHV---HIDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITE
        PV +   P    R PAA   A +       R  P +  D R +   P           +DGAVDVL++DD    RL+++  EL V  +  +LQIV ++ E
Subjt:  PVPQQNLPDLSRRQPAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAHV---HIDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITE

Query:  KIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRRVSKRHGDP---PRFIGAAA-------------------
        ++RHC D AR     G +++V   P  A   ++ L  GE  ++L      +G+ G+  +   V + HG P   P   GAA                    
Subjt:  KIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRRVSKRHGDP---PRFIGAAA-------------------

Query:  ---MAVVGEKP---PLPGDSLE--LLRRGRNVIEIQREKLVATV------AIEGVVNSVVRGDGEGDPIGGFGAGESEAAAGGGGGVEGVEVEGDMAVEV
           + V GE     PLP    E  L+ R R+  E     L   V      A+EG+ + V+ G+ EGD  G  GA ++EAAA  GGG  G EVE D  VE+
Subjt:  ---MAVVGEKP---PLPGDSLE--LLRRGRNVIEIQREKLVATV------AIEGVVNSVVRGDGEGDPIGGFGAGESEAAAGGGGGVEGVEVEGDMAVEV

Query:  VEVDGAVAVELGDVEV---GEGSEEILKGVVEG-VEEREEVGGEEVLEDGEEA
        V VD   AV+L  VEV   GE  E++++ +  G  E R E G EE L +GE+A
Subjt:  VEVDGAVAVELGDVEV---GEGSEEILKGVVEG-VEEREEVGGEEVLEDGEEA

A0A2P5FJI5 Uncharacterized protein1.4e-1633.33Show/hide
Query:  PVPQQNLPDLSRRQPAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAH------VHIDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHI
        PV +   P    R PAA   A +       R  P +  D R E   PA A A         +DGAVDVL+ DD    RL+++  EL V  +  +LQIV +
Subjt:  PVPQQNLPDLSRRQPAAGPHAAVDHVEQRMRVEPQIVLDQRSEGVRPARAEAH------VHIDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHI

Query:  ITEKIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRRVSKRHGDP---PRFIGAAAMAVVGEK---------
        + E++RHC D AR     G +++V   P  A+  ++ L  GE  +++    L +G+ G+  +   V + HG P   P   GAAA   V E          
Subjt:  ITEKIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSFKRRRVSKRHGDP---PRFIGAAAMAVVGEK---------

Query:  PPLPGDSLELLRRGRNVIEI---------------QREKLVATV----------AIEGVVNSVVRGDGEGDPIGGFGAGESEAAAGGGGGVEGVEVEGDM
         PL GD +E+      ++ +                RE L   +          A+EGV + V+ G+ EGD     GA ++EAAA  GGG  G EVE D 
Subjt:  PPLPGDSLELLRRGRNVIEI---------------QREKLVATV----------AIEGVVNSVVRGDGEGDPIGGFGAGESEAAAGGGGGVEGVEVEGDM

Query:  AVEVVEVDGAVAVELGDVEV---GEGSEEILKGVVEG-VEEREEVGGEEVLEDGEEA
         VE+V VD   AV+L  VEV   GE  E++++ +  G  E R E G EE L +GE+A
Subjt:  AVEVVEVDGAVAVELGDVEV---GEGSEEILKGVVEG-VEEREEVGGEEVLEDGEEA

A0A5A7P5A9 DNA-directed RNA polymerase subunit beta3.4e-1541.84Show/hide
Query:  IDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITEKIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSF
        I+GAVDVLN++DR  RR++KK  ELGVV + S+L+IVH++ EKI H     R +    P ++V  FP  ++  I +L   E  +I+ D++L  G+ GQS 
Subjt:  IDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITEKIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQILRDLLLQLGLKGQSF

Query:  KRRRVSKRHGDP-PRFIGAAAMAVVGEKPPLP---GDSLEL
        +  RV + H  P  R + AA   VVG + P P   GD L L
Subjt:  KRRRVSKRHGDP-PRFIGAAAMAVVGEKPPLP---GDSLEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGCGGAGCTTTCGGCAGTTCGGCGCTTCTTTCCTCTTCTTCTCCGTCCCGTACTTCCCCGGCGACGAATCCCAATTTTCCGGCGAACCCACCACCAGCACGCTCT
CCGGCGACCTCATTACGCCAGCCGTTTCTTCATATTCCGCCGCCGCCTGCTCTCCACCACAGCCGCCGGACAAAATCCGCGATTGCAAGGCGGAGACCACCTCCCTCATG
GCGACGTCGGCGTCCCGCCGGTTCCTCAACAGAATCTCCCCGATCTGAGCCGGCGTCAGCCCGCCGCTGGACCTCATGCAGCTGTCGACCACGTCGAACAGCGCATGCGA
GTGGAGCCCCAAATAGTTCTTGACCAGAGATCGGAAGGCGTTCGGCCCGCACGTGCCGAGGCTCACGTGCACATCGACGGAGCAGTCGATGTCCTCAATCACGATGATCG
ACCGATTCGTCGTCTGAATAAGAAGCGATCGGAGCTCGGAGTTGTCGGAAACTTTAGTAAGCTCCAAATCGTACACATCATAACAGAGAAAATTCGCCATTGCAGCGATC
AAGCTCGATTTTCCCGATCCGGGGGGCCCATAAAGCAAGTACCCACGTTTCCACGCGCGGCCAACTCTGCGATAAAACTCCTTCCCGCCGGCGAAGGCCGTCAAATCCTC
CGTGATCTGCTTCTTCAGCTCGGGCTCAAGGGCCAGAGTTTCAAACGTAGAAGGGTGTCGAAACGGCACGGAGACCCACCCAGATTCATAGGAGCTGCCGCCATGGCCGT
TGTTGGTGAAAAGCCGCCGCTCCCGGGAGATTCGCTCGAACTCCTCCGCCGTGGACGTAACGTGATCGAGATACAGAGAGAGAAGCTCGTGGCGACGGTGGCCATTGAAG
GAGTCGTGAACAGTGTGGTTAGGGGCGACGGTGAAGGAGATCCGATTGGAGGATTTGGAGCGGGAGAGAGTGAGGCGGCGGCAGGGGGCGGCGGAGGGGTTGAGGGAGTT
GAGGTAGAGGGAGACATGGCGGTAGAGGTCGTTGAGGTCGACGGCGCAGTAGCCGTTGAACTCGGGGACGTCGAAGTAGGAGAAGGGAGTGAAGAAATCTTGAAGGGAGT
CGTAGAAGGAGTGGAGGAGAGAGAGGAAGTGGGAGGGGAGGAGGTTCTGGAGGACGGTGAGGAGGCCAAGGAAGGACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGCGGAGCTTTCGGCAGTTCGGCGCTTCTTTCCTCTTCTTCTCCGTCCCGTACTTCCCCGGCGACGAATCCCAATTTTCCGGCGAACCCACCACCAGCACGCTCT
CCGGCGACCTCATTACGCCAGCCGTTTCTTCATATTCCGCCGCCGCCTGCTCTCCACCACAGCCGCCGGACAAAATCCGCGATTGCAAGGCGGAGACCACCTCCCTCATG
GCGACGTCGGCGTCCCGCCGGTTCCTCAACAGAATCTCCCCGATCTGAGCCGGCGTCAGCCCGCCGCTGGACCTCATGCAGCTGTCGACCACGTCGAACAGCGCATGCGA
GTGGAGCCCCAAATAGTTCTTGACCAGAGATCGGAAGGCGTTCGGCCCGCACGTGCCGAGGCTCACGTGCACATCGACGGAGCAGTCGATGTCCTCAATCACGATGATCG
ACCGATTCGTCGTCTGAATAAGAAGCGATCGGAGCTCGGAGTTGTCGGAAACTTTAGTAAGCTCCAAATCGTACACATCATAACAGAGAAAATTCGCCATTGCAGCGATC
AAGCTCGATTTTCCCGATCCGGGGGGCCCATAAAGCAAGTACCCACGTTTCCACGCGCGGCCAACTCTGCGATAAAACTCCTTCCCGCCGGCGAAGGCCGTCAAATCCTC
CGTGATCTGCTTCTTCAGCTCGGGCTCAAGGGCCAGAGTTTCAAACGTAGAAGGGTGTCGAAACGGCACGGAGACCCACCCAGATTCATAGGAGCTGCCGCCATGGCCGT
TGTTGGTGAAAAGCCGCCGCTCCCGGGAGATTCGCTCGAACTCCTCCGCCGTGGACGTAACGTGATCGAGATACAGAGAGAGAAGCTCGTGGCGACGGTGGCCATTGAAG
GAGTCGTGAACAGTGTGGTTAGGGGCGACGGTGAAGGAGATCCGATTGGAGGATTTGGAGCGGGAGAGAGTGAGGCGGCGGCAGGGGGCGGCGGAGGGGTTGAGGGAGTT
GAGGTAGAGGGAGACATGGCGGTAGAGGTCGTTGAGGTCGACGGCGCAGTAGCCGTTGAACTCGGGGACGTCGAAGTAGGAGAAGGGAGTGAAGAAATCTTGAAGGGAGT
CGTAGAAGGAGTGGAGGAGAGAGAGGAAGTGGGAGGGGAGGAGGTTCTGGAGGACGGTGAGGAGGCCAAGGAAGGACCATAA
Protein sequenceShow/hide protein sequence
MGAELSAVRRFFPLLLRPVLPRRRIPIFRRTHHQHALRRPHYASRFFIFRRRLLSTTAAGQNPRLQGGDHLPHGDVGVPPVPQQNLPDLSRRQPAAGPHAAVDHVEQRMR
VEPQIVLDQRSEGVRPARAEAHVHIDGAVDVLNHDDRPIRRLNKKRSELGVVGNFSKLQIVHIITEKIRHCSDQARFSRSGGPIKQVPTFPRAANSAIKLLPAGEGRQIL
RDLLLQLGLKGQSFKRRRVSKRHGDPPRFIGAAAMAVVGEKPPLPGDSLELLRRGRNVIEIQREKLVATVAIEGVVNSVVRGDGEGDPIGGFGAGESEAAAGGGGGVEGV
EVEGDMAVEVVEVDGAVAVELGDVEVGEGSEEILKGVVEGVEEREEVGGEEVLEDGEEAKEGP