; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000002 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000002
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor GTE1 isoform X3
Genome locationscaffold1:173902..179766
RNA-Seq ExpressionSpg000002
SyntenySpg000002
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR036427 - Bromodomain-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026375.1 Transcription factor GTE1 [Cucurbita argyrosperma subsp. argyrosperma]4.4e-4180.87Show/hide
Query:  ATSFWMAFSELNLQ---LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFM
        A  F     E+++Q   LEKRVIEIEQFYL R DAQQNISK SSTLKD+DKEKHITSIRKQQQD+SRREGAAAKRMQELMRQFATIFRQI+QHKWAWPF+
Subjt:  ATSFWMAFSELNLQ---LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFM

Query:  DPVDVVGLGLRDYYE
        DPVDV GLGL DYYE
Subjt:  DPVDVVGLGLRDYYE

XP_022146614.1 transcription factor GTE1 isoform X1 [Momordica charantia]1.1e-4191.92Show/hide
Query:  QLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE
        +LEKRVIEIEQFYL R DA QNISKGSSTLKD+DKEKHIT IRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDV GLGL DYYE
Subjt:  QLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE

XP_022146615.1 transcription factor GTE1 isoform X2 [Momordica charantia]1.1e-4191.92Show/hide
Query:  QLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE
        +LEKRVIEIEQFYL R DA QNISKGSSTLKD+DKEKHIT IRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDV GLGL DYYE
Subjt:  QLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE

XP_022146616.1 transcription factor GTE1 isoform X3 [Momordica charantia]2.3e-4292Show/hide
Query:  LQLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE
        +QLEKRVIEIEQFYL R DA QNISKGSSTLKD+DKEKHIT IRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDV GLGL DYYE
Subjt:  LQLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE

XP_023003632.1 transcription factor GTE1-like isoform X2 [Cucurbita maxima]4.4e-4180.87Show/hide
Query:  ATSFWMAFSELNLQ---LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFM
        A  F     E+++Q   LEKRVIEIEQFYL R DAQQNISK SSTLKD+DKEKHITSIRKQQQD+SRREGAAAKRMQELMRQFATIFRQI+QHKWAWPF+
Subjt:  ATSFWMAFSELNLQ---LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFM

Query:  DPVDVVGLGLRDYYE
        DPVDV GLGL DYYE
Subjt:  DPVDVVGLGLRDYYE

TrEMBL top hitse value%identityAlignment
A0A6J1CXQ8 transcription factor GTE1 isoform X25.6e-4291.92Show/hide
Query:  QLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE
        +LEKRVIEIEQFYL R DA QNISKGSSTLKD+DKEKHIT IRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDV GLGL DYYE
Subjt:  QLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE

A0A6J1CYL1 transcription factor GTE1 isoform X15.6e-4291.92Show/hide
Query:  QLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE
        +LEKRVIEIEQFYL R DA QNISKGSSTLKD+DKEKHIT IRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDV GLGL DYYE
Subjt:  QLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE

A0A6J1CZW9 transcription factor GTE1 isoform X31.1e-4292Show/hide
Query:  LQLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE
        +QLEKRVIEIEQFYL R DA QNISKGSSTLKD+DKEKHIT IRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDV GLGL DYYE
Subjt:  LQLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE

A0A6J1EEP1 transcription factor GTE1-like isoform X22.1e-4180.87Show/hide
Query:  ATSFWMAFSELNLQ---LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFM
        A  F     E+++Q   LEKRVIEIEQFYL R DAQQNISK SSTLKD+DKEKHITSIRKQQQD+SRREGAAAKRMQELMRQFATIFRQI+QHKWAWPF+
Subjt:  ATSFWMAFSELNLQ---LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFM

Query:  DPVDVVGLGLRDYYE
        DPVDV GLGL DYYE
Subjt:  DPVDVVGLGLRDYYE

A0A6J1KTW0 transcription factor GTE1-like isoform X22.1e-4180.87Show/hide
Query:  ATSFWMAFSELNLQ---LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFM
        A  F     E+++Q   LEKRVIEIEQFYL R DAQQNISK SSTLKD+DKEKHITSIRKQQQD+SRREGAAAKRMQELMRQFATIFRQI+QHKWAWPF+
Subjt:  ATSFWMAFSELNLQ---LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFM

Query:  DPVDVVGLGLRDYYE
        DPVDV GLGL DYYE
Subjt:  DPVDVVGLGLRDYYE

SwissProt top hitse value%identityAlignment
Q7Y214 Transcription factor GTE71.5e-0428.95Show/hide
Query:  KDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE----------AKEDLDP--LLSGCDFARSVW
        K + ++K+++ +++  Q     +  + K +  ++   + I  ++ +HKWAW F  PVDVVGLGL DY++           K +LD    +S  DFA  V 
Subjt:  KDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE----------AKEDLDP--LLSGCDFARSVW

Query:  SLFFEVFGFQFTGQ
          F     +   GQ
Subjt:  SLFFEVFGFQFTGQ

Q84XV2 Transcription factor GTE13.5e-1742.5Show/hide
Query:  QLEKRVIEIEQFYLGRVDA------------------QQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWP
        QLE++V+E+E FY  +  A                  Q N SKG+S  K++ K KH++S                    +LMRQFAT+FRQI QHKWAWP
Subjt:  QLEKRVIEIEQFYLGRVDA------------------QQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWP

Query:  FMDPVDVVGLGLRDYYEAKE
        F++PVDV GLGL DYY+  E
Subjt:  FMDPVDVVGLGLRDYYEAKE

Q9FT54 Transcription factor GTE62.5e-2358.16Show/hide
Query:  LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE
        LE ++ E+E+FY     +   +S   S  KD +K +H+  IRK QQ+A+RRE  AAKRMQ+LMRQF TIFRQITQHK AWPFM PV+V GLGL DY+E
Subjt:  LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE

Q9LXA7 Transcription factor GTE24.0e-0534.48Show/hide
Query:  KRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE----------AKEDLDPLL--SGCDFARSVWSLFFEVFGFQFTGQ
        K ++ +M     I  ++ +HKW+W F++PVDVVGLGL DY+            K +L+  L  S  DFA  V   F     +   GQ
Subjt:  KRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE----------AKEDLDPLL--SGCDFARSVWSLFFEVFGFQFTGQ

Arabidopsis top hitse value%identityAlignment
AT2G34900.1 Transcription factor GTE62.5e-1842.5Show/hide
Query:  QLEKRVIEIEQFYLGRVDA------------------QQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWP
        QLE++V+E+E FY  +  A                  Q N SKG+S  K++ K KH++S                    +LMRQFAT+FRQI QHKWAWP
Subjt:  QLEKRVIEIEQFYLGRVDA------------------QQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWP

Query:  FMDPVDVVGLGLRDYYEAKE
        F++PVDV GLGL DYY+  E
Subjt:  FMDPVDVVGLGLRDYYEAKE

AT2G34900.2 Transcription factor GTE64.1e-1376.92Show/hide
Query:  MRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYEAKE
        MRQFAT+FRQI QHKWAWPF++PVDV GLGL DYY+  E
Subjt:  MRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYEAKE

AT3G52280.1 general transcription factor group E61.8e-2458.16Show/hide
Query:  LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE
        LE ++ E+E+FY     +   +S   S  KD +K +H+  IRK QQ+A+RRE  AAKRMQ+LMRQF TIFRQITQHK AWPFM PV+V GLGL DY+E
Subjt:  LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE

AT3G52280.2 general transcription factor group E61.8e-2458.16Show/hide
Query:  LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE
        LE ++ E+E+FY     +   +S   S  KD +K +H+  IRK QQ+A+RRE  AAKRMQ+LMRQF TIFRQITQHK AWPFM PV+V GLGL DY+E
Subjt:  LEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQDASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE

AT5G10550.1 global transcription factor group E22.8e-0634.48Show/hide
Query:  KRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE----------AKEDLDPLL--SGCDFARSVWSLFFEVFGFQFTGQ
        K ++ +M     I  ++ +HKW+W F++PVDVVGLGL DY+            K +L+  L  S  DFA  V   F     +   GQ
Subjt:  KRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYE----------AKEDLDPLL--SGCDFARSVWSLFFEVFGFQFTGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGCATCAACACGGCTGATGTGCTTCAATGAAAATCCCCTGGGATTGCTCTTTCCCGTAGCTGCTGCTGCTTCTGTTATAGGGATCAAGAAACCCAAATCCACCTT
TTCAGCAACTGCCCTTTGCTTCAATCGTATGGGACTTCTTGCAACAAGCTTTTGGATGGCATTCTCTGAGCTAAACTTGCAGCTTGAGAAGAGAGTGATTGAAATTGAAC
AATTCTACTTGGGTAGAGTTGATGCTCAGCAGAATATTTCAAAAGGTAGTTCAACTTTGAAGGATAGAGACAAGGAAAAACATATAACCAGTATCAGGAAGCAACAGCAA
GATGCATCACGCAGGGAAGGAGCGGCTGCAAAGAGAATGCAAGAGCTTATGCGTCAGTTTGCTACAATTTTCCGCCAGATCACTCAACACAAGTGGGCATGGCCCTTTAT
GGATCCTGTCGATGTTGTAGGTCTTGGCTTACGTGACTATTATGAGGCGAAAGAAGATCTTGATCCTTTGCTGTCGGGTTGTGATTTTGCTCGCTCAGTCTGGAGCCTCT
TCTTTGAGGTTTTCGGTTTTCAGTTTACTGGTCAGTGTTGTTGTAGTGAGATGATCAAGGTGTTCCTCCTCCATCCGCCGTTCTGGGAGAAAGGAAGATGCGCAAGACCG
ATCTTTCTTTCTTCCCAGTGTTGGCACGAGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATGCATCAACACGGCTGATGTGCTTCAATGAAAATCCCCTGGGATTGCTCTTTCCCGTAGCTGCTGCTGCTTCTGTTATAGGGATCAAGAAACCCAAATCCACCTT
TTCAGCAACTGCCCTTTGCTTCAATCGTATGGGACTTCTTGCAACAAGCTTTTGGATGGCATTCTCTGAGCTAAACTTGCAGCTTGAGAAGAGAGTGATTGAAATTGAAC
AATTCTACTTGGGTAGAGTTGATGCTCAGCAGAATATTTCAAAAGGTAGTTCAACTTTGAAGGATAGAGACAAGGAAAAACATATAACCAGTATCAGGAAGCAACAGCAA
GATGCATCACGCAGGGAAGGAGCGGCTGCAAAGAGAATGCAAGAGCTTATGCGTCAGTTTGCTACAATTTTCCGCCAGATCACTCAACACAAGTGGGCATGGCCCTTTAT
GGATCCTGTCGATGTTGTAGGTCTTGGCTTACGTGACTATTATGAGGCGAAAGAAGATCTTGATCCTTTGCTGTCGGGTTGTGATTTTGCTCGCTCAGTCTGGAGCCTCT
TCTTTGAGGTTTTCGGTTTTCAGTTTACTGGTCAGTGTTGTTGTAGTGAGATGATCAAGGTGTTCCTCCTCCATCCGCCGTTCTGGGAGAAAGGAAGATGCGCAAGACCG
ATCTTTCTTTCTTCCCAGTGTTGGCACGAGGAGTAG
Protein sequenceShow/hide protein sequence
MHASTRLMCFNENPLGLLFPVAAAASVIGIKKPKSTFSATALCFNRMGLLATSFWMAFSELNLQLEKRVIEIEQFYLGRVDAQQNISKGSSTLKDRDKEKHITSIRKQQQ
DASRREGAAAKRMQELMRQFATIFRQITQHKWAWPFMDPVDVVGLGLRDYYEAKEDLDPLLSGCDFARSVWSLFFEVFGFQFTGQCCCSEMIKVFLLHPPFWEKGRCARP
IFLSSQCWHEE