; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000010 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000010
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionArp2/3 complex 34 kDa subunit
Genome locationscaffold1:115693..118513
RNA-Seq ExpressionSpg000010
SyntenySpg000010
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0005200 - structural constituent of cytoskeleton (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR007188 - Actin-related protein 2/3 complex subunit 2
IPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052409.1 actin-related protein 2/3 complex subunit 2A [Cucumis melo var. makuwa]6.3e-7092.67Show/hide
Query:  SLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHAILV
        SLEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDEDNRH +LV
Subjt:  SLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHAILV

Query:  KVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
        K+ASIREVVLGAPLR ILKQLGSRVVASDVN+LVA+VH PKESFFLV Q+
Subjt:  KVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

XP_004134509.1 actin-related protein 2/3 complex subunit 2A [Cucumis sativus]1.3e-7092.16Show/hide
Query:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA
        R ++LEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDEDNRH 
Subjt:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA

Query:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
        ILVKVASIREVVLGAPLR ILKQLGSRVVASDVN+LVA+VH PKESFFLV Q+
Subjt:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

XP_008439412.1 PREDICTED: actin-related protein 2/3 complex subunit 2A [Cucumis melo]2.2e-7089.68Show/hide
Query:  MCRFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNR
        + R ++LEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDEDNR
Subjt:  MCRFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNR

Query:  HAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
        H +LVK+ASIREVVLGAPLR ILKQLGSRVVASDVN+LVA+VH PKESFFLV Q+
Subjt:  HAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

XP_022990855.1 actin-related protein 2/3 complex subunit 2A [Cucurbita maxima]3.7e-7091.5Show/hide
Query:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA
        R  +LEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLP DEDNRHA
Subjt:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA

Query:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
         LVKVASIREVVLGAPLRVILKQLGSR++ SDVNRLVA+VH PKESFFLV Q+
Subjt:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

XP_038877487.1 actin-related protein 2/3 complex subunit 2A isoform X2 [Benincasa hispida]6.3e-7090.85Show/hide
Query:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA
        R ++LEK VEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSAD VFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA
Subjt:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA

Query:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
        +LVKVASIREVVLGAPLR ILKQLGSRVVASDVNR+VA+VH PKESFFLV Q+
Subjt:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

TrEMBL top hitse value%identityAlignment
A0A0A0KIL8 Arp2/3 complex 34 kDa subunit6.2e-7192.16Show/hide
Query:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA
        R ++LEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDEDNRH 
Subjt:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA

Query:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
        ILVKVASIREVVLGAPLR ILKQLGSRVVASDVN+LVA+VH PKESFFLV Q+
Subjt:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

A0A1S3AYP0 Arp2/3 complex 34 kDa subunit1.1e-7089.68Show/hide
Query:  MCRFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNR
        + R ++LEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDEDNR
Subjt:  MCRFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNR

Query:  HAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
        H +LVK+ASIREVVLGAPLR ILKQLGSRVVASDVN+LVA+VH PKESFFLV Q+
Subjt:  HAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

A0A5A7UG04 Arp2/3 complex 34 kDa subunit3.1e-7092.67Show/hide
Query:  SLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHAILV
        SLEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDEDNRH +LV
Subjt:  SLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHAILV

Query:  KVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
        K+ASIREVVLGAPLR ILKQLGSRVVASDVN+LVA+VH PKESFFLV Q+
Subjt:  KVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

A0A6J1HA86 Arp2/3 complex 34 kDa subunit5.2e-7090.85Show/hide
Query:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA
        R  +LEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLP DEDNRH 
Subjt:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA

Query:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
         LVKVASIREVVLGAPLRVILKQLGSR++ SDVNRLVA+VH PKESFFLV Q+
Subjt:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

A0A6J1JR90 Arp2/3 complex 34 kDa subunit1.8e-7091.5Show/hide
Query:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA
        R  +LEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLP DEDNRHA
Subjt:  RFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHA

Query:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
         LVKVASIREVVLGAPLRVILKQLGSR++ SDVNRLVA+VH PKESFFLV Q+
Subjt:  ILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

SwissProt top hitse value%identityAlignment
F4IVU1 Actin-related protein 2/3 complex subunit 2B9.6e-1328.38Show/hide
Query:  EKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHAILVKV
        EK +EVD ++ EF  + YH++ S+ + ++  +S S  + +   V    + S   E IK     ++ I+DPPR GF LTL LNL  +P  ++    I+ ++
Subjt:  EKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHAILVKV

Query:  ASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHCPKESFFLVRQ
        + ++ ++L + L+ +L+ L  +  +  +N + + +V+ P E F++ +Q
Subjt:  ASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHCPKESFFLVRQ

Q8LGI3 Actin-related protein 2/3 complex subunit 2A2.3e-4661.94Show/hide
Query:  MCRFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNR
        + R  +L+KAVE+DY W+EFDDVRYHVQV+MKN +L LLSVSLP P  + +   GLP GAIEAIK  YG   QILDPPRDGF+LTLKLN SK+  DE+  
Subjt:  MCRFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNR

Query:  HAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
          +L K+ASIREVV+GAPL++I K L SR VA +++RLVA++H P E+FFLV Q+
Subjt:  HAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

Arabidopsis top hitse value%identityAlignment
AT1G30825.1 Arp2/3 complex, 34 kD subunit p34-Arc1.6e-4761.94Show/hide
Query:  MCRFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNR
        + R  +L+KAVE+DY W+EFDDVRYHVQV+MKN +L LLSVSLP P  + +   GLP GAIEAIK  YG   QILDPPRDGF+LTLKLN SK+  DE+  
Subjt:  MCRFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNR

Query:  HAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS
          +L K+ASIREVV+GAPL++I K L SR VA +++RLVA++H P E+FFLV Q+
Subjt:  HAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQS

AT2G33385.1 actin-related protein C2B6.8e-1428.38Show/hide
Query:  EKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHAILVKV
        EK +EVD ++ EF  + YH++ S+ + ++  +S S  + +   V    + S   E IK     ++ I+DPPR GF LTL LNL  +P  ++    I+ ++
Subjt:  EKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHAILVKV

Query:  ASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHCPKESFFLVRQ
        + ++ ++L + L+ +L+ L  +  +  +N + + +V+ P E F++ +Q
Subjt:  ASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHCPKESFFLVRQ

AT2G33385.2 actin-related protein C2B6.8e-1428.38Show/hide
Query:  EKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHAILVKV
        EK +EVD ++ EF  + YH++ S+ + ++  +S S  + +   V    + S   E IK     ++ I+DPPR GF LTL LNL  +P  ++    I+ ++
Subjt:  EKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHAILVKV

Query:  ASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHCPKESFFLVRQ
        + ++ ++L + L+ +L+ L  +  +  +N + + +V+ P E F++ +Q
Subjt:  ASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHCPKESFFLVRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCGCTTCAATTCTCTTGAAAAAGCAGTGGAAGTGGATTACAACTGGGTGGAATTTGATGATGTGCGTTACCATGTCCAGGTCTCAATGAAGAACACCCATCTCTT
CCTGCTATCCGTATCATTGCCCATCCCTTCTGCAGATACTGTTTTTTGTGGTGGGCTTCCATCTGGAGCTATAGAAGCTATTAAAGCTGCATATGGCGTGCTTGTACAGA
TTCTTGATCCTCCAAGAGATGGTTTTAATCTCACATTAAAATTGAATCTTTCGAAACTTCCTCTTGATGAAGATAATAGGCACGCTATTTTGGTAAAAGTTGCATCTATT
AGGGAAGTGGTTCTTGGTGCTCCATTAAGAGTAATTCTTAAACAACTCGGGTCAAGGGTTGTTGCTTCCGACGTCAATAGGCTTGTTGCAATGGTACATTGTCCAAAAGA
GTCATTTTTTCTTGTCCGTCAGTCTTTGAGACAGATGGAAAGCAATTGTAGTTCTTATGCTCATGGAAATTATCTTCTGGAAGAAAGGAAAAGGTGTCGTTCTTATTTCG
TCAAACTTCATTGTAAACTTGATATTTGTATGCCTAAGGTAAGGGTTTATGAAGCTTCTTCCGTCATAAAGGATTTGGGGGCTCCTCCATCTTTACCTAAGCAAGACTCT
TTACCTCATCCAAGTTTTATTGGTGATGAAATTTCTTCAAAAAATTTCTGGATTAGAAAAGAAAAGGAGGTGGCAAAGCTTTGCCCAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTCGCTTCAATTCTCTTGAAAAAGCAGTGGAAGTGGATTACAACTGGGTGGAATTTGATGATGTGCGTTACCATGTCCAGGTCTCAATGAAGAACACCCATCTCTT
CCTGCTATCCGTATCATTGCCCATCCCTTCTGCAGATACTGTTTTTTGTGGTGGGCTTCCATCTGGAGCTATAGAAGCTATTAAAGCTGCATATGGCGTGCTTGTACAGA
TTCTTGATCCTCCAAGAGATGGTTTTAATCTCACATTAAAATTGAATCTTTCGAAACTTCCTCTTGATGAAGATAATAGGCACGCTATTTTGGTAAAAGTTGCATCTATT
AGGGAAGTGGTTCTTGGTGCTCCATTAAGAGTAATTCTTAAACAACTCGGGTCAAGGGTTGTTGCTTCCGACGTCAATAGGCTTGTTGCAATGGTACATTGTCCAAAAGA
GTCATTTTTTCTTGTCCGTCAGTCTTTGAGACAGATGGAAAGCAATTGTAGTTCTTATGCTCATGGAAATTATCTTCTGGAAGAAAGGAAAAGGTGTCGTTCTTATTTCG
TCAAACTTCATTGTAAACTTGATATTTGTATGCCTAAGGTAAGGGTTTATGAAGCTTCTTCCGTCATAAAGGATTTGGGGGCTCCTCCATCTTTACCTAAGCAAGACTCT
TTACCTCATCCAAGTTTTATTGGTGATGAAATTTCTTCAAAAAATTTCTGGATTAGAAAAGAAAAGGAGGTGGCAAAGCTTTGCCCAAATTAA
Protein sequenceShow/hide protein sequence
MCRFNSLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEDNRHAILVKVASI
REVVLGAPLRVILKQLGSRVVASDVNRLVAMVHCPKESFFLVRQSLRQMESNCSSYAHGNYLLEERKRCRSYFVKLHCKLDICMPKVRVYEASSVIKDLGAPPSLPKQDS
LPHPSFIGDEISSKNFWIRKEKEVAKLCPN