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Spg000011 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000011
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationscaffold1:260803..266474
RNA-Seq ExpressionSpg000011
SyntenySpg000011
Gene Ontology termsGO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19563.1 uncharacterized protein E5676_scaffold416G00660 [Cucumis melo var. makuwa]8.1e-1853.16Show/hide
Query:  VEFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHEAWYLVKYNVSLWALVTRLFC
        V  A  R +R   E F+ HPPF+E+G+FLW A +CAI+W +WGERN+R FRG +RD  E   LV+++VSLW  V++LFC
Subjt:  VEFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHEAWYLVKYNVSLWALVTRLFC

XP_016900613.1 PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]6.9e-1738.4Show/hide
Query:  DFREMIQEFLLHPLFRDKGRFLWLAGMFGVCLARNNKWSSTVE-----FARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLE
        DF  +   FLLH +  D      L  + G     +  W + ++     +AR R +R  IEEFL + P  E+G+FLW+A +CAI+W LW E N R F G+E
Subjt:  DFREMIQEFLLHPLFRDKGRFLWLAGMFGVCLARNNKWSSTVE-----FARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLE

Query:  RDSHEAWYLVKYNVSLWALVTRLFC
        R + E W +++Y+VSLW  +++ FC
Subjt:  RDSHEAWYLVKYNVSLWALVTRLFC

XP_022978597.1 uncharacterized protein LOC111478534 [Cucurbita maxima]9.9e-1691.67Show/hide
Query:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP
        MPP+LPGYYYD QKNRYFPLKGPIPGSSRTSSSSSSAPHHKR SK TP
Subjt:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP

XP_023544797.1 uncharacterized protein LOC111804281 [Cucurbita pepo subsp. pepo]9.9e-1691.67Show/hide
Query:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP
        MPP+LPGYYYD QKNRYFPLKGPIPGSSRTSSSSSSAPHHKR SK TP
Subjt:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP

XP_038877526.1 uncharacterized protein LOC120069787 [Benincasa hispida]1.5e-1695.83Show/hide
Query:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP
        MPPDLPGYYYDAQKNRYF LKGP+PGSSRTSSSSSSAPHHKRVSKSTP
Subjt:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909763.3e-1738.4Show/hide
Query:  DFREMIQEFLLHPLFRDKGRFLWLAGMFGVCLARNNKWSSTVE-----FARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLE
        DF  +   FLLH +  D      L  + G     +  W + ++     +AR R +R  IEEFL + P  E+G+FLW+A +CAI+W LW E N R F G+E
Subjt:  DFREMIQEFLLHPLFRDKGRFLWLAGMFGVCLARNNKWSSTVE-----FARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLE

Query:  RDSHEAWYLVKYNVSLWALVTRLFC
        R + E W +++Y+VSLW  +++ FC
Subjt:  RDSHEAWYLVKYNVSLWALVTRLFC

A0A5D3D7T2 Uncharacterized protein3.9e-1853.16Show/hide
Query:  VEFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHEAWYLVKYNVSLWALVTRLFC
        V  A  R +R   E F+ HPPF+E+G+FLW A +CAI+W +WGERN+R FRG +RD  E   LV+++VSLW  V++LFC
Subjt:  VEFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHEAWYLVKYNVSLWALVTRLFC

A0A6J1CYF0 uncharacterized protein LOC111015736 isoform X31.8e-1591.67Show/hide
Query:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP
        MPPDLPGYYYDAQKNRYFPLKGPIPG+SRTSSSSSSA  HKR+SKSTP
Subjt:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP

A0A6J1CYV5 uncharacterized protein LOC111015736 isoform X21.8e-1591.67Show/hide
Query:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP
        MPPDLPGYYYDAQKNRYFPLKGPIPG+SRTSSSSSSA  HKR+SKSTP
Subjt:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP

A0A6J1ILI1 uncharacterized protein LOC1114785344.8e-1691.67Show/hide
Query:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP
        MPP+LPGYYYD QKNRYFPLKGPIPGSSRTSSSSSSAPHHKR SK TP
Subjt:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G17370.1 Transducin/WD40 repeat-like superfamily protein8.1e-0851.06Show/hide
Query:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKST
        M P+LPG+YYD +KNRYFP+KGPIPG+  +SSS +      +  + T
Subjt:  MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACTCCTTGACTTTCCCGACGACCGCCGGCTGCCGTCGGCCAGTGAAGCCCGGCTAGTCGGTAGTCGGCATCGGCACTTCCAGTTCCCTGACCATCCGAACCACCG
CTTCGAACTCTACCATCTCTTCCTTCGCAACGCTGCTTCCATCCCCACCGTCACCACTTTCGGAAGAGTCATGCCACCAGATCTCCCTGGCTATTACTACGATGCCCAGA
AGAACAGGTATTTCCCTCTCAAAGGCCCAATACCTGGCTCTTCTCGCACTTCCTCCTCCTCCTCTTCAGCCCCTCATCATAAACGAGTTTCTAAGTCCACCCCGGCGAGA
CGATTCAGAGACTTCAGGGAGATGATCCAGGAGTTCCTCCTCCATCCGCTGTTTCGCGATAAAGGGAGATTTTTATGGTTAGCTGGGATGTTTGGTGTTTGCTTAGCTAG
GAACAACAAGTGGAGCTCTACAGTGGAGTTTGCCAGACCCAGAGGCCTTAGAGAGACGATCGAGGAGTTCCTCCCCCATCCTCCCTTTAGGGAGCAGGGGAAGTTTTTGT
GGCAAGCTGGGATTTGTGCCATTATTTGGGGGCTTTGGGGTGAGAGAAACAATAGAACGTTTAGAGGGTTGGAGAGGGATTCTCATGAGGCTTGGTACCTTGTTAAATAT
AATGTTTCTCTTTGGGCGTTGGTGACGCGCTTATTTTGCTGTAGGGATGAGACGAGTTATGCAGATCATAGGGAGATGATTGAGGAGTTCCTCCTCCATCCGTTGATTCG
TGAGAAGACGAGATTTTTGTGGCAAGCGGGGATCTGTGATGGGACAGTTTTGCCCTCACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGACTCCTTGACTTTCCCGACGACCGCCGGCTGCCGTCGGCCAGTGAAGCCCGGCTAGTCGGTAGTCGGCATCGGCACTTCCAGTTCCCTGACCATCCGAACCACCG
CTTCGAACTCTACCATCTCTTCCTTCGCAACGCTGCTTCCATCCCCACCGTCACCACTTTCGGAAGAGTCATGCCACCAGATCTCCCTGGCTATTACTACGATGCCCAGA
AGAACAGGTATTTCCCTCTCAAAGGCCCAATACCTGGCTCTTCTCGCACTTCCTCCTCCTCCTCTTCAGCCCCTCATCATAAACGAGTTTCTAAGTCCACCCCGGCGAGA
CGATTCAGAGACTTCAGGGAGATGATCCAGGAGTTCCTCCTCCATCCGCTGTTTCGCGATAAAGGGAGATTTTTATGGTTAGCTGGGATGTTTGGTGTTTGCTTAGCTAG
GAACAACAAGTGGAGCTCTACAGTGGAGTTTGCCAGACCCAGAGGCCTTAGAGAGACGATCGAGGAGTTCCTCCCCCATCCTCCCTTTAGGGAGCAGGGGAAGTTTTTGT
GGCAAGCTGGGATTTGTGCCATTATTTGGGGGCTTTGGGGTGAGAGAAACAATAGAACGTTTAGAGGGTTGGAGAGGGATTCTCATGAGGCTTGGTACCTTGTTAAATAT
AATGTTTCTCTTTGGGCGTTGGTGACGCGCTTATTTTGCTGTAGGGATGAGACGAGTTATGCAGATCATAGGGAGATGATTGAGGAGTTCCTCCTCCATCCGTTGATTCG
TGAGAAGACGAGATTTTTGTGGCAAGCGGGGATCTGTGATGGGACAGTTTTGCCCTCACTTTAG
Protein sequenceShow/hide protein sequence
MRLLDFPDDRRLPSASEARLVGSRHRHFQFPDHPNHRFELYHLFLRNAASIPTVTTFGRVMPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSKSTPAR
RFRDFREMIQEFLLHPLFRDKGRFLWLAGMFGVCLARNNKWSSTVEFARPRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDSHEAWYLVKY
NVSLWALVTRLFCCRDETSYADHREMIEEFLLHPLIREKTRFLWQAGICDGTVLPSL