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Spg000018 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000018
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor GTE1
Genome locationscaffold1:158489..162299
RNA-Seq ExpressionSpg000018
SyntenySpg000018
Gene Ontology termsGO:0010030 - positive regulation of seed germination (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001487 - Bromodomain
IPR017413 - Transcription factor GTE1
IPR036427 - Bromodomain-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026375.1 Transcription factor GTE1 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-4793.58Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDF TIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLL+KFEEKWLQLLPKVAEEEKR+VEEE E QFDMQ AQEATYAN
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
        MARDISNE+
Subjt:  MARDISNEM

XP_022146614.1 transcription factor GTE1 isoform X1 [Momordica charantia]1.6e-4896.33Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDFRTIK KMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAE QFDMQLAQEATYAN
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
        MAR+ISNE+
Subjt:  MARDISNEM

XP_022146615.1 transcription factor GTE1 isoform X2 [Momordica charantia]1.6e-4896.33Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDFRTIK KMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAE QFDMQLAQEATYAN
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
        MAR+ISNE+
Subjt:  MARDISNEM

XP_022146616.1 transcription factor GTE1 isoform X3 [Momordica charantia]1.6e-4896.33Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDFRTIK KMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAE QFDMQLAQEATYAN
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
        MAR+ISNE+
Subjt:  MARDISNEM

XP_022146617.1 transcription factor GTE1 isoform X4 [Momordica charantia]1.6e-4896.33Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDFRTIK KMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAE QFDMQLAQEATYAN
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
        MAR+ISNE+
Subjt:  MARDISNEM

TrEMBL top hitse value%identityAlignment
A0A6J1CXQ8 transcription factor GTE1 isoform X27.8e-4996.33Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDFRTIK KMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAE QFDMQLAQEATYAN
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
        MAR+ISNE+
Subjt:  MARDISNEM

A0A6J1CYL1 transcription factor GTE1 isoform X17.8e-4996.33Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDFRTIK KMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAE QFDMQLAQEATYAN
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
        MAR+ISNE+
Subjt:  MARDISNEM

A0A6J1CZW9 transcription factor GTE1 isoform X37.8e-4996.33Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDFRTIK KMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAE QFDMQLAQEATYAN
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
        MAR+ISNE+
Subjt:  MARDISNEM

A0A6J1D026 transcription factor GTE1 isoform X47.8e-4996.33Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDFRTIK KMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAE QFDMQLAQEATYAN
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
        MAR+ISNE+
Subjt:  MARDISNEM

A0A6J1EEP1 transcription factor GTE1-like isoform X21.9e-4793.58Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDF TIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLL+KFEEKWLQLLPKVAEEEKR+VEEE E QFDMQ AQEATYAN
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
        MARDISNE+
Subjt:  MARDISNEM

SwissProt top hitse value%identityAlignment
Q84XV2 Transcription factor GTE14.4e-3367.27Show/hide
Query:  RVIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYA
        +VI+KPMD  TIK KME+   S Y NVREIYADVRLVFKNAMRYN+EK DV+VMA++LL+KFEEKWL ++PK+ EEEK+QV+EEAE   + QL  EA  A
Subjt:  RVIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYA

Query:  NMARDISNEM
         MARD+SNE+
Subjt:  NMARDISNEM

Q93YS6 Transcription factor GTE91.3e-0847.95Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVA
        VI+ PMD  T+KNK+ +     Y    E  ADVRL F NAM YN   NDV+VMA TL   FE +W  L  K++
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVA

Q9FT54 Transcription factor GTE62.1e-3061.47Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDF TIKN+MEAKDG+GYK+V +IYAD+RLVF+NAM YN+E +DV+ MAK LL+KFEEKW   LPKV EEEK + EEE ++  +  LA+EA++  
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
          R++ NE+
Subjt:  MARDISNEM

Q9LNC4 Transcription factor GTE42.6e-0952.31Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKW
        +I+ PMD  TIK+ +     + YK+ RE   DVRL F NAM YN E  DVH+MA TLL  FEE+W
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKW

Q9LS28 Transcription factor GTE121.7e-0846.48Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPK
        VI KPMD  T+K+K+     + Y N  E  ADVRL F NAM YN   N+VH +AK + + FE +W  L+ K
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPK

Arabidopsis top hitse value%identityAlignment
AT1G06230.1 global transcription factor group E41.9e-1052.31Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKW
        +I+ PMD  TIK+ +     + YK+ RE   DVRL F NAM YN E  DVH+MA TLL  FEE+W
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKW

AT2G34900.1 Transcription factor GTE63.2e-3467.27Show/hide
Query:  RVIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYA
        +VI+KPMD  TIK KME+   S Y NVREIYADVRLVFKNAMRYN+EK DV+VMA++LL+KFEEKWL ++PK+ EEEK+QV+EEAE   + QL  EA  A
Subjt:  RVIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYA

Query:  NMARDISNEM
         MARD+SNE+
Subjt:  NMARDISNEM

AT2G34900.2 Transcription factor GTE63.2e-3467.27Show/hide
Query:  RVIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYA
        +VI+KPMD  TIK KME+   S Y NVREIYADVRLVFKNAMRYN+EK DV+VMA++LL+KFEEKWL ++PK+ EEEK+QV+EEAE   + QL  EA  A
Subjt:  RVIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYA

Query:  NMARDISNEM
         MARD+SNE+
Subjt:  NMARDISNEM

AT3G52280.1 general transcription factor group E61.5e-3161.47Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDF TIKN+MEAKDG+GYK+V +IYAD+RLVF+NAM YN+E +DV+ MAK LL+KFEEKW   LPKV EEEK + EEE ++  +  LA+EA++  
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
          R++ NE+
Subjt:  MARDISNEM

AT3G52280.2 general transcription factor group E61.5e-3161.47Show/hide
Query:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN
        VIDKPMDF TIKN+MEAKDG+GYK+V +IYAD+RLVF+NAM YN+E +DV+ MAK LL+KFEEKW   LPKV EEEK + EEE ++  +  LA+EA++  
Subjt:  VIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEAESQFDMQLAQEATYAN

Query:  MARDISNEM
          R++ NE+
Subjt:  MARDISNEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGCTTCAAGTCCAGTCAGAGAATCCAGAAGAGTCAGAAGCCAAAGAATCCAGAGAATTCAGAAGGATTCGAGTTATTGACAAACCAATGGATTTTAGAACAAT
TAAAAACAAAATGGAAGCTAAAGATGGTTCTGGGTACAAGAATGTCCGTGAGATATATGCTGATGTGAGATTGGTTTTTAAGAATGCGATGAGATATAACGATGAAAAGA
ATGATGTTCATGTGATGGCAAAAACCTTGCTGGATAAATTTGAAGAGAAGTGGCTGCAGCTTTTGCCCAAAGTTGCCGAAGAGGAAAAAAGACAAGTGGAGGAGGAAGCC
GAGTCACAGTTTGATATGCAGCTTGCACAGGAGGCAACTTATGCTAACATGGCAAGAGACATAAGCAATGAGATGGTTGTGAGGGCCGGCGGTGCAAGATTTCTCGATGG
AGATGACGGTAGAGTAGCAGAAGAAGTGGCAACTAGAGTTCTTTTTCACGTGAAGAAGATAACTCTTGGGTTTGGATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGCTTCAAGTCCAGTCAGAGAATCCAGAAGAGTCAGAAGCCAAAGAATCCAGAGAATTCAGAAGGATTCGAGTTATTGACAAACCAATGGATTTTAGAACAAT
TAAAAACAAAATGGAAGCTAAAGATGGTTCTGGGTACAAGAATGTCCGTGAGATATATGCTGATGTGAGATTGGTTTTTAAGAATGCGATGAGATATAACGATGAAAAGA
ATGATGTTCATGTGATGGCAAAAACCTTGCTGGATAAATTTGAAGAGAAGTGGCTGCAGCTTTTGCCCAAAGTTGCCGAAGAGGAAAAAAGACAAGTGGAGGAGGAAGCC
GAGTCACAGTTTGATATGCAGCTTGCACAGGAGGCAACTTATGCTAACATGGCAAGAGACATAAGCAATGAGATGGTTGTGAGGGCCGGCGGTGCAAGATTTCTCGATGG
AGATGACGGTAGAGTAGCAGAAGAAGTGGCAACTAGAGTTCTTTTTCACGTGAAGAAGATAACTCTTGGGTTTGGATCCTGA
Protein sequenceShow/hide protein sequence
MKKLQVQSENPEESEAKESREFRRIRVIDKPMDFRTIKNKMEAKDGSGYKNVREIYADVRLVFKNAMRYNDEKNDVHVMAKTLLDKFEEKWLQLLPKVAEEEKRQVEEEA
ESQFDMQLAQEATYANMARDISNEMVVRAGGARFLDGDDGRVAEEVATRVLFHVKKITLGFGS