; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000029 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000029
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionycf3-interacting protein 1, chloroplastic
Genome locationscaffold1:206331..211678
RNA-Seq ExpressionSpg000029
SyntenySpg000029
Gene Ontology termsGO:0048564 - photosystem I assembly (biological process)
GO:0080183 - response to photooxidative stress (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR040340 - Chloroplast enhancing stress tolerance protein
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034827.1 hypothetical protein SDJN02_04559, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1892.73Show/hide
Query:  VEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
        VEAPKKKRSKSLYA  TDTGVNPREAAKRLNIDWDTAAE+EDADLS+DPEVPAAV
Subjt:  VEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV

XP_004134512.1 ycf3-interacting protein 1, chloroplastic isoform X1 [Cucumis sativus]2.7e-6941.12Show/hide
Query:  MPIMAFQLRHFPLSPSSSSTSIEHSYR-AHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR
        M +MA QLRHFPLS S SS SIEH+Y  + RFR+L LPSH    HLPVPS+RNRR +ACVGKEDTQLRQ SST DEQP+AQDLEY+RQIQRVLELLKKNR
Subjt:  MPIMAFQLRHFPLSPSSSSTSIEHSYR-AHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR

Query:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLERLMNLLITYSCFGSRYCSFGVVWPIPIIF
        DMLFNEVKLTVMIEDPREVERRRLLGID+DDAPTRDDLAATLEEVNEGKFP NRVALQMLAEEMTNWPNLE                             
Subjt:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLERLMNLLITYSCFGSRYCSFGVVWPIPIIF

Query:  WCTMTPATCGVSRLGFLDISLLSLLLLLHFFSVIFSNCKFLSDAFMALLSLIDGASLRLDMRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLLK
                                                                                                            
Subjt:  WCTMTPATCGVSRLGFLDISLLSLLLLLHFFSVIFSNCKFLSDAFMALLSLIDGASLRLDMRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLLK

Query:  VKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTIEEFLLHPPVRKKGKFLW
                                                                                                            
Subjt:  VKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTIEEFLLHPPVRKKGKFLW

Query:  LVGVCAILWGLWGERNNRIFRGIERHYCMVEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
                                      EAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
Subjt:  LVGVCAILWGLWGERNNRIFRGIERHYCMVEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV

XP_022146693.1 ycf3-interacting protein 1, chloroplastic [Momordica charantia]3.5e-6985.55Show/hide
Query:  MPIMAFQLRHFPL---SPSSSSTSIEHSYRAHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKK
        M +MA QLRHFPL   S SSSS+SIE + +A RFRHL LPS+A HQHL +PSTRN RIVACVGKEDTQLRQSSST D+ PDAQDLEYVRQIQRVLELLKK
Subjt:  MPIMAFQLRHFPL---SPSSSSTSIEHSYRAHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKK

Query:  NRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE
        NRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFP NRVAL+MLAEEM NWPNLE
Subjt:  NRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE

XP_022146693.1 ycf3-interacting protein 1, chloroplastic [Momordica charantia]1.1e-1485.96Show/hide
Query:  VEAPKKK--RSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
        VEAP KK  RSKSLYAKATDTGV+P  AAKRLNIDWD+AAEIEDADLS+DPEVPAAV
Subjt:  VEAPKKK--RSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV

XP_022146693.1 ycf3-interacting protein 1, chloroplastic [Momordica charantia]6.1e-6983.14Show/hide
Query:  IMPIMAFQLRHFPLSPSSSSTSIEHSYRAHR-FRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKN
        IM +MA QLRHFPLSPS S  SI+H+Y+A R FRHL LP++A   HLPV S+RNRR+V CVGKE+TQL QSSST+DEQPDAQDLEY+RQIQRVLELLKKN
Subjt:  IMPIMAFQLRHFPLSPSSSSTSIEHSYRAHR-FRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKN

Query:  RDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE
        RDMLFNEVKLTVMIEDPREVERRRLLGIDD+DAPTRDDLA TLEEVNEGKFP NR ALQMLAEEMTNWPNLE
Subjt:  RDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE

XP_023544733.1 protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]5.0e-7174.02Show/hide
Query:  MPIMAFQLRHFPLSPSSSSTSIEHSYRAHR-FRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR
        M +MA QL HFPLSPS S  SI+H+Y+A R FRHL  P++A   HLPV S+RNRR+V CVGKE+TQL QSSST+DEQPDAQDLEY+RQIQRVLELLKKNR
Subjt:  MPIMAFQLRHFPLSPSSSSTSIEHSYRAHR-FRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR

Query:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLERLMNLLITYSCFGSRYCSFGVVWPIPIIF
        DMLFNEVKLTVMIEDPREVERRRLLGIDD+DAPTRDDLA TLEEVNEGKFP NR ALQMLAEEMTNWPNLE                  F VVWPIPII 
Subjt:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLERLMNLLITYSCFGSRYCSFGVVWPIPIIF

Query:  WCTM
        W T+
Subjt:  WCTM

XP_038877519.1 ycf3-interacting protein 1, chloroplastic [Benincasa hispida]3.8e-7141.74Show/hide
Query:  MPIMAFQLRHFPLSPSSSSTSIEHSYRAH-RFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR
        M +MA QLRHFPLSPSSS  SIEH+Y+A  RFRHL LPS+A   HLPVP++RNR+ +ACVGKEDTQLRQSSSTQDEQPDAQ LEYVRQIQRVLELLKKNR
Subjt:  MPIMAFQLRHFPLSPSSSSTSIEHSYRAH-RFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR

Query:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLERLMNLLITYSCFGSRYCSFGVVWPIPIIF
        DMLFNEVKLTVMIEDPR+VERRRLLGIDDDDAPTRDDLAATLEEVNEGKFP NRVALQMLAEEMTNWPNLE                             
Subjt:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLERLMNLLITYSCFGSRYCSFGVVWPIPIIF

Query:  WCTMTPATCGVSRLGFLDISLLSLLLLLHFFSVIFSNCKFLSDAFMALLSLIDGASLRLDMRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLLK
                                                                                                            
Subjt:  WCTMTPATCGVSRLGFLDISLLSLLLLLHFFSVIFSNCKFLSDAFMALLSLIDGASLRLDMRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLLK

Query:  VKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTIEEFLLHPPVRKKGKFLW
                                                                                                            
Subjt:  VKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTIEEFLLHPPVRKKGKFLW

Query:  LVGVCAILWGLWGERNNRIFRGIERHYCMVEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
                                      EAPKKKR KSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
Subjt:  LVGVCAILWGLWGERNNRIFRGIERHYCMVEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV

TrEMBL top hitse value%identityAlignment
A0A0A0KJ48 Uncharacterized protein1.3e-6941.12Show/hide
Query:  MPIMAFQLRHFPLSPSSSSTSIEHSYR-AHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR
        M +MA QLRHFPLS S SS SIEH+Y  + RFR+L LPSH    HLPVPS+RNRR +ACVGKEDTQLRQ SST DEQP+AQDLEY+RQIQRVLELLKKNR
Subjt:  MPIMAFQLRHFPLSPSSSSTSIEHSYR-AHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR

Query:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLERLMNLLITYSCFGSRYCSFGVVWPIPIIF
        DMLFNEVKLTVMIEDPREVERRRLLGID+DDAPTRDDLAATLEEVNEGKFP NRVALQMLAEEMTNWPNLE                             
Subjt:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLERLMNLLITYSCFGSRYCSFGVVWPIPIIF

Query:  WCTMTPATCGVSRLGFLDISLLSLLLLLHFFSVIFSNCKFLSDAFMALLSLIDGASLRLDMRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLLK
                                                                                                            
Subjt:  WCTMTPATCGVSRLGFLDISLLSLLLLLHFFSVIFSNCKFLSDAFMALLSLIDGASLRLDMRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLLK

Query:  VKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTIEEFLLHPPVRKKGKFLW
                                                                                                            
Subjt:  VKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTIEEFLLHPPVRKKGKFLW

Query:  LVGVCAILWGLWGERNNRIFRGIERHYCMVEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
                                      EAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
Subjt:  LVGVCAILWGLWGERNNRIFRGIERHYCMVEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV

A0A5A7UFW0 Ycf3-interacting protein 16.2e-1996.3Show/hide
Query:  EAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
        EAPKK+RSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADL DDPEVPAAV
Subjt:  EAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV

A0A6J1CZ78 ycf3-interacting protein 1, chloroplastic1.7e-6985.55Show/hide
Query:  MPIMAFQLRHFPL---SPSSSSTSIEHSYRAHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKK
        M +MA QLRHFPL   S SSSS+SIE + +A RFRHL LPS+A HQHL +PSTRN RIVACVGKEDTQLRQSSST D+ PDAQDLEYVRQIQRVLELLKK
Subjt:  MPIMAFQLRHFPL---SPSSSSTSIEHSYRAHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKK

Query:  NRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE
        NRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFP NRVAL+MLAEEM NWPNLE
Subjt:  NRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE

A0A6J1CZ78 ycf3-interacting protein 1, chloroplastic5.4e-1585.96Show/hide
Query:  VEAPKKK--RSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
        VEAP KK  RSKSLYAKATDTGV+P  AAKRLNIDWD+AAEIEDADLS+DPEVPAAV
Subjt:  VEAPKKK--RSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV

A0A6J1CZ78 ycf3-interacting protein 1, chloroplastic8.5e-6983.04Show/hide
Query:  MPIMAFQLRHFPLSPSSSSTSIEHSYRAHR-FRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR
        M +MA QLRHFPLSPS S  SI+H+Y+A R FRHL LP++A   HLPV S+RNRR+V CVGKE+TQL QSSST+DEQPDAQDLEY+RQIQRVLELLKKNR
Subjt:  MPIMAFQLRHFPLSPSSSSTSIEHSYRAHR-FRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR

Query:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE
        DMLFNEVKLTVMIEDPREVERRRLLGIDD+DAPTRDDLA TLEEVNEGKFP NR ALQMLAEEMTNWPNLE
Subjt:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE

A0A6J1EC41 ycf3-interacting protein 1, chloroplastic1.4e-1892.73Show/hide
Query:  VEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
        VEAPKKKRSKSLYA  TDTGVNPREAAKRLNIDWDTAAE+EDADLS+DPEVPAAV
Subjt:  VEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV

A0A6J1EC41 ycf3-interacting protein 1, chloroplastic5.5e-6883.04Show/hide
Query:  MPIMAFQLRHFPLSPSSSSTSIEHSYRAHR-FRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR
        M +MA QLRHFPLSPS S  SI+H+Y+A R FRHL LP++A   HLPV S+RNR +V CVGKEDTQL QSSST+ EQPDAQDLEY+RQIQRVLELLKKNR
Subjt:  MPIMAFQLRHFPLSPSSSSTSIEHSYRAHR-FRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR

Query:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE
        DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLA TLEEVNEGKFP NR ALQMLAEEMTNWPNLE
Subjt:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE

A0A6J1IQU0 ycf3-interacting protein 1, chloroplastic1.4e-1892.73Show/hide
Query:  VEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
        VEAPKKKRSKSLYA  TDTGVNPREAAKRLNIDWDTAAE+EDADLS+DPEVPAAV
Subjt:  VEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV

A0A6J1IQU0 ycf3-interacting protein 1, chloroplastic1.0e-6683.04Show/hide
Query:  MPIMAFQLRHFPLSPSSSSTSIEHSYRAH-RFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR
        M +MA QLRHF LSPS SS SIEH+Y  + RFR L LPSH  H  L VPS+RNRR +ACVGKEDTQLRQSSST DEQPDAQ LEY+ QI+RVLELLKKNR
Subjt:  MPIMAFQLRHFPLSPSSSSTSIEHSYRAH-RFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNR

Query:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE
        DMLFNEVKLTVMIEDPREVERRRLLGID+DDAPTRDDLAATLEEVNEGKFP NRVALQMLAEEMT WPNLE
Subjt:  DMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE

SwissProt top hitse value%identityAlignment
B8AAV3 Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic3.1e-3145.64Show/hide
Query:  LRHFPLSPS--------SSSTSIEHSYRAHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSS----------------------STQDEQP
        LR  P SP+        SS  S+ H +       L LPS A  +     S R RR+ A +G+++  +  ++                      ++  EQP
Subjt:  LRHFPLSPS--------SSSTSIEHSYRAHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSS----------------------STQDEQP

Query:  DA--QDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE
        +A  +DLE +RQ++RVLELL+KNRDM F EVKLT+MIEDPR++ER+RLLGI+D D  TRDDLA  L EVNEG+ P NRVALQ+LA+EMT WP+LE
Subjt:  DA--QDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE

B8AAV3 Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic3.5e-1163.79Show/hide
Query:  VEAPKKKR--SKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDD-PEVPAAV
        +EAPKKK    KS+YAKATDTG++P  AAKRLNIDWD+AA+++D +  DD  EVP+AV
Subjt:  VEAPKKKR--SKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDD-PEVPAAV

E5KCJ8 Ycf3-interacting protein 1, chloroplastic1.2e-3573.79Show/hide
Query:  QSSSTQDEQPDAQDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWP
        +     D+ PD Q LEYV QI+RVLELLK+NRDMLF EVKLT+MIEDPR+VERRRLLGIDD++APTRDDLAA LEE+NEGK P +  ALQMLAEEM +WP
Subjt:  QSSSTQDEQPDAQDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWP

Query:  NLE
        NLE
Subjt:  NLE

E5KCJ8 Ycf3-interacting protein 1, chloroplastic1.2e-1164.29Show/hide
Query:  VEAPKK-KRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
        VEA K+ K  +SLYAKATDTG++P+EAAKRL IDWD+AAEI+++  SD+P+VP A+
Subjt:  VEAPKK-KRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV

Q5VQK9 Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic4.0e-3145.64Show/hide
Query:  LRHFPLSPS--------SSSTSIEHSYRAHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSS----------------------STQDEQP
        LR  P SP+        SS  S+ H +       L LPS A  +     S R RR+ A +G+++  +  ++                      +   EQP
Subjt:  LRHFPLSPS--------SSSTSIEHSYRAHRFRHLRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSS----------------------STQDEQP

Query:  DA--QDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE
        +A  +DLE +RQ++RVLELL+KNRDM F EVKLT+MIEDPR++ER+RLLGI+D D  TRDDLA  L EVNEG+ P NRVALQ+LA+EMT WP+LE
Subjt:  DA--QDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEVNEGKFPTNRVALQMLAEEMTNWPNLE

Q5VQK9 Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic3.5e-1163.79Show/hide
Query:  VEAPKKKR--SKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDD-PEVPAAV
        +EAPKKK    KS+YAKATDTG++P  AAKRLNIDWD+AA+++D +  DD  EVP+AV
Subjt:  VEAPKKKR--SKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDD-PEVPAAV

Q9LU01 Ycf3-interacting protein 1, chloroplastic5.8e-3053.97Show/hide
Query:  LPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEV
        +PVP T  ++      ++D    +     +   D +DL+YV +I+RV+ELL++NRDM+F+EVKLT+MIEDPRE+ERRRLLGI+D D P+RDDLA  LE+V
Subjt:  LPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEV

Query:  NEGKFPTNRVALQMLAEEMTNWPNLE
        N+GK P +R  L+ML EEM  WPNLE
Subjt:  NEGKFPTNRVALQMLAEEMTNWPNLE

Q9LU01 Ycf3-interacting protein 1, chloroplastic3.5e-1158.18Show/hide
Query:  VEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
        VE  KK+R KS+YAK+TDTG++P+EAAKRLN++WD+AA IE+ D+ D+  V   V
Subjt:  VEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV

Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.0e-0727.56Show/hide
Query:  VNPSPVRKSVFSCL-LKVKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTI
        +NP   R   F  +  K K PK   F AW  +  R++T DR+  +    + P  C+ C   +E   HL ++CEFAR VW          F S  H     
Subjt:  VNPSPVRKSVFSCL-LKVKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTI

Query:  EEFLLHPPVRKKGKFLWLVGVC--------------AILWGLWGERNNRIFRGIER
            + PP+  +    WL   C              A ++ +W ERN R+     R
Subjt:  EEFLLHPPVRKKGKFLWLVGVC--------------AILWGLWGERNNRIFRGIER

AT2G02650.1 Ribonuclease H-like superfamily protein5.9e-0623Show/hide
Query:  VNPSPVRKSVFSCLLKVKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTIE
        + P P    V   + K+    K+  F W+ + G + T  R LR +     P C   C + EE + H+++NC + +SVW     +   Q+       D + 
Subjt:  VNPSPVRKSVFSCLLKVKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTIE

Query:  EFLLHPPVRKKG---KFL--WLVGVCAILWGLWGERNNRIFRGIERHYCM---VEAPKKKRSKSLYAKATDT--------GVNPREAAKRLNIDWDTAAE
          +     +      +FL  W      I+W LW  RN  +F    +  C     EA K  +  + +  A +T          NP + ++R +  W+   E
Subjt:  EFLLHPPVRKKG---KFL--WLVGVCAILWGLWGERNNRIFRGIERHYCM---VEAPKKKRSKSLYAKATDT--------GVNPREAAKRLNIDWDTAAE

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.7e-0627.42Show/hide
Query:  LLSLIDGASLRLDMR--DARFWSLD---PSAGFSCRSFFQFLVNPS---PVRKSVFSCLLKVKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCM
        L +L+  A   LD +  D+  W  D   PS  FS    +  L   S   P  K+V+    K   PK   F  W V   R++T DRL      +  P  C+
Subjt:  LLSLIDGASLRLDMR--DARFWSLD---PSAGFSCRSFFQFLVNPS---PVRKSVFSCLLKVKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCM

Query:  LCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTIEEFLLHPPVRKKGKFLWLVGVCAILWGLWGERNNRIFRGIER
        LC   +++  HL + C+F+  VW  F               D +  +LL P   K    +  +   + ++ +W ERN R+  G+ R
Subjt:  LCWKAEENLDHLLWNCEFARSVWSLFFEVFEFQFASHRHCRDTIEEFLLHPPVRKKGKFLWLVGVCAILWGLWGERNNRIFRGIER

AT4G29090.1 Ribonuclease H-like superfamily protein5.6e-0422.16Show/hide
Query:  DARFWSLDPSAGFSCRSFFQFLVN-----------PSPVRKSVFSCLLKVKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHL
        D+  W    S  ++ +S +  L               P    ++  + K +   K+  F W+ +   +     L      L     C+ C   +E ++HL
Subjt:  DARFWSLDPSAGFSCRSFFQFLVN-----------PSPVRKSVFSCLLKVKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHL

Query:  LWNCEFARSVWSLFFEVFEFQFASHRHCRDTIEEFLLHPPVRKKGKFLWLVG---VCAILWGLWGERNNRIFRGIE
        L+ C FAR  W+    +            D+I   L        G   W      V  +LW LW  RN  +FRG E
Subjt:  LWNCEFARSVWSLFFEVFEFQFASHRHCRDTIEEFLLHPPVRKKGKFLWLVG---VCAILWGLWGERNNRIFRGIE

AT5G44650.1 Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage.4.1e-3153.97Show/hide
Query:  LPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEV
        +PVP T  ++      ++D    +     +   D +DL+YV +I+RV+ELL++NRDM+F+EVKLT+MIEDPRE+ERRRLLGI+D D P+RDDLA  LE+V
Subjt:  LPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEEV

Query:  NEGKFPTNRVALQMLAEEMTNWPNLE
        N+GK P +R  L+ML EEM  WPNLE
Subjt:  NEGKFPTNRVALQMLAEEMTNWPNLE

AT5G44650.1 Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage.2.5e-1258.18Show/hide
Query:  VEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV
        VE  KK+R KS+YAK+TDTG++P+EAAKRLN++WD+AA IE+ D+ D+  V   V
Subjt:  VEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCTTCCGCGATTTTCAAAGATTTCCAGTTGGATGTGCTCTTGGCTGAGTTAAGTGCGATCTATGAGGGAATCAATTTGGCAAAGGAGCTGGGTTGCACTAAACT
TATGGTGGAACCTGACAGCCAAATGGCTATTAACTTTTTGACAAAAAAATCAGTGGTCTGGAAATCTATGGAGGCCTTAGTGGAGTCTATTTGGAGTCTTTCTTCTAACT
TCAATAGAATAATGCCAATCATGGCTTTTCAACTCCGTCACTTCCCACTCTCCCCTTCTTCTTCTTCTACGTCTATCGAACACAGTTACAGAGCTCATCGCTTCCGCCAT
CTTCGTCTTCCCAGCCATGCCCTTCACCAACATCTTCCAGTTCCAAGTACCCGCAATCGACGGATTGTGGCCTGCGTTGGCAAGGAAGATACCCAATTGCGTCAATCATC
GTCTACCCAAGACGAACAGCCAGACGCCCAGGACCTAGAATACGTTCGTCAGATTCAAAGGGTATTGGAGCTTCTCAAGAAAAACAGAGACATGCTCTTCAATGAGGTTA
AACTTACCGTAATGATTGAAGACCCCCGGGAAGTTGAGCGCAGGAGATTACTTGGAATTGACGACGACGATGCCCCAACAAGGGATGATTTAGCGGCCACTCTTGAAGAA
GTCAATGAAGGAAAGTTCCCAACAAATCGAGTAGCTCTCCAAATGCTTGCTGAAGAGATGACCAATTGGCCTAATTTGGAGAGGCTGATGAATCTTCTGATCACTTATTC
TTGTTTTGGCTCTAGATACTGTAGTTTTGGTGTTGTATGGCCAATACCAATCATTTTTTGGTGTACAATGACACCCGCTACATGTGGGGTCAGTCGGCTTGGTTTTCTTG
ACATTTCTCTTTTATCCTTGCTTCTCTTGCTCCACTTCTTTTCTGTGATTTTTTCAAATTGTAAGTTTCTATCAGATGCATTCATGGCCCTCTTATCTTTGATTGATGGG
GCTAGCCTTAGATTGGACATGAGGGATGCGCGCTTTTGGAGTCTTGACCCCTCTGCGGGCTTTTCCTGCAGATCGTTTTTTCAGTTTCTGGTCAACCCCTCCCCCGTTAG
AAAGTCTGTCTTTTCGTGTCTCTTGAAGGTAAAGGCTCCGAAGAAGGTCTTGTTCTTTGCTTGGCAGGTCATCTTGGGTCGTGTTAACACCTTTGATAGGCTTTTGAGAG
TGAAGGCTCCTTTGGTCGGTCCTTTTTGTTGCATGCTTTGTTGGAAGGCTGAGGAAAATCTTGATCATTTGTTGTGGAATTGTGAGTTTGCTCGCTCTGTCTGGAGTCTC
TTCTTTGAGGTCTTCGAGTTTCAGTTTGCGAGCCACCGCCATTGTAGGGATACAATCGAGGAGTTCCTCCTCCATCCGCCGGTTCGGAAGAAAGGAAAGTTTCTTTGGCT
TGTTGGAGTGTGCGCTATTTTGTGGGGCTTATGGGGGGAAAGGAACAATAGAATCTTTAGGGGGATCGAGAGACATTATTGTATGGTTGAGGCACCCAAGAAGAAACGCA
GTAAATCTTTATATGCAAAAGCCACAGACACTGGTGTGAATCCTCGAGAGGCTGCAAAGAGACTAAACATTGATTGGGACACTGCAGCTGAGATCGAAGATGCCGACTTG
AGTGATGACCCGGAAGTGCCTGCTGCTGTGGTTTGGATATGGAGCACTGTACATTGTGACAGCTTTCCCAGTGATAATTGGCATCTCAGTAGTTCTAATCCTTTTCTACA
ATTCTCTTCAATAGTGTATGTGGCAGTATACATGGCTGATAATTGCGCCTTTGCAGTTTCTGACCTTTCACGAGAGTTTATCATGTATTCAGTCTCAAGTGAGGACCAGA
ATGAGTCGGTGATGAATTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTCTTCCGCGATTTTCAAAGATTTCCAGTTGGATGTGCTCTTGGCTGAGTTAAGTGCGATCTATGAGGGAATCAATTTGGCAAAGGAGCTGGGTTGCACTAAACT
TATGGTGGAACCTGACAGCCAAATGGCTATTAACTTTTTGACAAAAAAATCAGTGGTCTGGAAATCTATGGAGGCCTTAGTGGAGTCTATTTGGAGTCTTTCTTCTAACT
TCAATAGAATAATGCCAATCATGGCTTTTCAACTCCGTCACTTCCCACTCTCCCCTTCTTCTTCTTCTACGTCTATCGAACACAGTTACAGAGCTCATCGCTTCCGCCAT
CTTCGTCTTCCCAGCCATGCCCTTCACCAACATCTTCCAGTTCCAAGTACCCGCAATCGACGGATTGTGGCCTGCGTTGGCAAGGAAGATACCCAATTGCGTCAATCATC
GTCTACCCAAGACGAACAGCCAGACGCCCAGGACCTAGAATACGTTCGTCAGATTCAAAGGGTATTGGAGCTTCTCAAGAAAAACAGAGACATGCTCTTCAATGAGGTTA
AACTTACCGTAATGATTGAAGACCCCCGGGAAGTTGAGCGCAGGAGATTACTTGGAATTGACGACGACGATGCCCCAACAAGGGATGATTTAGCGGCCACTCTTGAAGAA
GTCAATGAAGGAAAGTTCCCAACAAATCGAGTAGCTCTCCAAATGCTTGCTGAAGAGATGACCAATTGGCCTAATTTGGAGAGGCTGATGAATCTTCTGATCACTTATTC
TTGTTTTGGCTCTAGATACTGTAGTTTTGGTGTTGTATGGCCAATACCAATCATTTTTTGGTGTACAATGACACCCGCTACATGTGGGGTCAGTCGGCTTGGTTTTCTTG
ACATTTCTCTTTTATCCTTGCTTCTCTTGCTCCACTTCTTTTCTGTGATTTTTTCAAATTGTAAGTTTCTATCAGATGCATTCATGGCCCTCTTATCTTTGATTGATGGG
GCTAGCCTTAGATTGGACATGAGGGATGCGCGCTTTTGGAGTCTTGACCCCTCTGCGGGCTTTTCCTGCAGATCGTTTTTTCAGTTTCTGGTCAACCCCTCCCCCGTTAG
AAAGTCTGTCTTTTCGTGTCTCTTGAAGGTAAAGGCTCCGAAGAAGGTCTTGTTCTTTGCTTGGCAGGTCATCTTGGGTCGTGTTAACACCTTTGATAGGCTTTTGAGAG
TGAAGGCTCCTTTGGTCGGTCCTTTTTGTTGCATGCTTTGTTGGAAGGCTGAGGAAAATCTTGATCATTTGTTGTGGAATTGTGAGTTTGCTCGCTCTGTCTGGAGTCTC
TTCTTTGAGGTCTTCGAGTTTCAGTTTGCGAGCCACCGCCATTGTAGGGATACAATCGAGGAGTTCCTCCTCCATCCGCCGGTTCGGAAGAAAGGAAAGTTTCTTTGGCT
TGTTGGAGTGTGCGCTATTTTGTGGGGCTTATGGGGGGAAAGGAACAATAGAATCTTTAGGGGGATCGAGAGACATTATTGTATGGTTGAGGCACCCAAGAAGAAACGCA
GTAAATCTTTATATGCAAAAGCCACAGACACTGGTGTGAATCCTCGAGAGGCTGCAAAGAGACTAAACATTGATTGGGACACTGCAGCTGAGATCGAAGATGCCGACTTG
AGTGATGACCCGGAAGTGCCTGCTGCTGTGGTTTGGATATGGAGCACTGTACATTGTGACAGCTTTCCCAGTGATAATTGGCATCTCAGTAGTTCTAATCCTTTTCTACA
ATTCTCTTCAATAGTGTATGTGGCAGTATACATGGCTGATAATTGCGCCTTTGCAGTTTCTGACCTTTCACGAGAGTTTATCATGTATTCAGTCTCAAGTGAGGACCAGA
ATGAGTCGGTGATGAATTTATGA
Protein sequenceShow/hide protein sequence
MFSSAIFKDFQLDVLLAELSAIYEGINLAKELGCTKLMVEPDSQMAINFLTKKSVVWKSMEALVESIWSLSSNFNRIMPIMAFQLRHFPLSPSSSSTSIEHSYRAHRFRH
LRLPSHALHQHLPVPSTRNRRIVACVGKEDTQLRQSSSTQDEQPDAQDLEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDDDDAPTRDDLAATLEE
VNEGKFPTNRVALQMLAEEMTNWPNLERLMNLLITYSCFGSRYCSFGVVWPIPIIFWCTMTPATCGVSRLGFLDISLLSLLLLLHFFSVIFSNCKFLSDAFMALLSLIDG
ASLRLDMRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLLKVKAPKKVLFFAWQVILGRVNTFDRLLRVKAPLVGPFCCMLCWKAEENLDHLLWNCEFARSVWSL
FFEVFEFQFASHRHCRDTIEEFLLHPPVRKKGKFLWLVGVCAILWGLWGERNNRIFRGIERHYCMVEAPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADL
SDDPEVPAAVVWIWSTVHCDSFPSDNWHLSSSNPFLQFSSIVYVAVYMADNCAFAVSDLSREFIMYSVSSEDQNESVMNL