; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000035 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000035
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionArp2/3 complex 34 kDa subunit
Genome locationscaffold1:136160..144739
RNA-Seq ExpressionSpg000035
SyntenySpg000035
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0005200 - structural constituent of cytoskeleton (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR007188 - Actin-related protein 2/3 complex subunit 2
IPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155338.1 actin-related protein 2/3 complex subunit 2A isoform X2 [Momordica charantia]1.7e-1688.68Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
        ++KCSEGFMHTRMRRRVESLIQALDRAKP+AT++RKKTHSRSFKRLVSDG+AG
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
XP_022158274.1 uncharacterized protein LOC111024802 isoform X1 [Momordica charantia]2.7e-1792.45Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
        ++KCSEGFMHTRMRRRVESLIQALDRAKPDATN+ KKTHSRSFKRLVSDGNAG
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
XP_022158277.1 uncharacterized protein LOC111024802 isoform X3 [Momordica charantia]2.7e-1792.45Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
        ++KCSEGFMHTRMRRRVESLIQALDRAKPDATN+ KKTHSRSFKRLVSDGNAG
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
XP_038877486.1 actin-related protein 2/3 complex subunit 2A isoform X1 [Benincasa hispida]1.7e-1688.68Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
        ++KCSEGFMHTRMRRRVESLIQALDRAKPDA ++RKKTHSRSFKRLV+DGNAG
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
XP_038877488.1 actin-related protein 2/3 complex subunit 2A isoform X3 [Benincasa hispida]1.7e-1688.68Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
        ++KCSEGFMHTRMRRRVESLIQALDRAKPDA ++RKKTHSRSFKRLV+DGNAG
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
TrEMBL top hitse value%identityAlignment
A0A0A0KIL8 Arp2/3 complex 34 kDa subunit3.2e-1686.79Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
        ++KCSEGFMHTRMRRRVESLIQALDRAKPDA  +R+KTHSRSFKRLV DGNAG
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
A0A1S3AYP0 Arp2/3 complex 34 kDa subunit7.1e-1684.91Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
        ++KCSEGFMHTRMRRRVESLIQALDRAKPDA  +R+KTHSRSFKRLV DGN+G
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
A0A6J1DMP8 Arp2/3 complex 34 kDa subunit8.4e-1788.68Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
        ++KCSEGFMHTRMRRRVESLIQALDRAKP+AT++RKKTHSRSFKRLVSDG+AG
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
A0A6J1DWU3 Arp2/3 complex 34 kDa subunit1.3e-1792.45Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
        ++KCSEGFMHTRMRRRVESLIQALDRAKPDATN+ KKTHSRSFKRLVSDGNAG
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
A0A6J1DYX6 Arp2/3 complex 34 kDa subunit1.3e-1792.45Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
        ++KCSEGFMHTRMRRRVESLIQALDRAKPDATN+ KKTHSRSFKRLVSDGNAG
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG
SwissProt top hitse value%identityAlignment
O96623 Actin-related protein 2/3 complex subunit 22.9e-0655.81Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSF
        ++KC++G+MHT MR RVESLIQ L+RAKP+  N+ K+T +  F
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSF
Q8LGI3 Actin-related protein 2/3 complex subunit 2A5.8e-0763.04Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRL
        ++K SEGFMHTRMRRRVES+IQALD+AKP      +  +++SFKRL
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRL
Arabidopsis top hitse value%identityAlignment
AT1G30825.1 Arp2/3 complex, 34 kD subunit p34-Arc4.1e-0863.04Show/hide
Query:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRL
        ++K SEGFMHTRMRRRVES+IQALD+AKP      +  +++SFKRL
Subjt:  NLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAAGAGAGGGATAACCTTTGCCAAGGAAGCCCAGGTCCTTACTATCTTTAAAAAAGGGAAGGTCCAAAGTACATCAAAGGACGACAACCCACGAAAAGGCAAGAA
GCAAGAAAATGTGGAGAGTGATCTGGACCAAGCTTCAGAACTTTCATATTCCAGCCCAGATAACAAGGAAGGAAAAGAAGATGAGATAGGGGGAAGCGACAAAGAAAACA
TTATCCCAGAAGACTTCAACCTCTACTGCCACGACAACGAGCAAGAAGTAGGGGATTGGCGGGAAGTTAGCGATAAGCCCGAAAGTTCCAGAAGTATGCAAAATATTGAG
ATAGACAGAAGCAAGGAGGACAACCCGAAGGCTCTAGCTATGATTCAAGGGGACGAACCAAACGGGGGGAATAAGGATACCAACGGTGAGACAGATAACTTCGCCATTAG
TAAAGAGATGATAGCTCTGTTAAGAAAGCATAACTTGTGTATAAGGTCGATGATTGGGAAAACTTCCAAACGAGGCTCCGCAGCACAGAAAAAGCGCTCCAGGGAAAGTT
ATTTGGATGTTAGGGAGATGATCGAGGAGTTCCTCCTCCATCCGCCTTTTCGCGAGAAGCGGAGATTCTTGTGGCAAGCTGGGTTGTGTGCTGTGTTATGGACTTTGTGG
GGGAAAGAAATAACAGAGTGTTTAGGGGGTTCAAGAAAGACCCAAGGGATGCATGGTCTGTTAGGGACCAAGGCAGCTGGTAACTATCAAGTAGGAAAGCTAGGAGTAGG
ATTCTTGATTATCGAAAACTTAAAGTGTTCAGAAGGTTTTATGCACACACGGATGCGACGTCGTGTTGAGTCTCTGATTCAGGCACTTGATCGTGCCAAGCCAGATGCAA
CCAATTCAAGGAAAAAAACACACAGCAGATCCTTCAAACGGCTGGTTAGTGATGGGAATGCTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGAAGAGAGGGATAACCTTTGCCAAGGAAGCCCAGGTCCTTACTATCTTTAAAAAAGGGAAGGTCCAAAGTACATCAAAGGACGACAACCCACGAAAAGGCAAGAA
GCAAGAAAATGTGGAGAGTGATCTGGACCAAGCTTCAGAACTTTCATATTCCAGCCCAGATAACAAGGAAGGAAAAGAAGATGAGATAGGGGGAAGCGACAAAGAAAACA
TTATCCCAGAAGACTTCAACCTCTACTGCCACGACAACGAGCAAGAAGTAGGGGATTGGCGGGAAGTTAGCGATAAGCCCGAAAGTTCCAGAAGTATGCAAAATATTGAG
ATAGACAGAAGCAAGGAGGACAACCCGAAGGCTCTAGCTATGATTCAAGGGGACGAACCAAACGGGGGGAATAAGGATACCAACGGTGAGACAGATAACTTCGCCATTAG
TAAAGAGATGATAGCTCTGTTAAGAAAGCATAACTTGTGTATAAGGTCGATGATTGGGAAAACTTCCAAACGAGGCTCCGCAGCACAGAAAAAGCGCTCCAGGGAAAGTT
ATTTGGATGTTAGGGAGATGATCGAGGAGTTCCTCCTCCATCCGCCTTTTCGCGAGAAGCGGAGATTCTTGTGGCAAGCTGGGTTGTGTGCTGTGTTATGGACTTTGTGG
GGGAAAGAAATAACAGAGTGTTTAGGGGGTTCAAGAAAGACCCAAGGGATGCATGGTCTGTTAGGGACCAAGGCAGCTGGTAACTATCAAGTAGGAAAGCTAGGAGTAGG
ATTCTTGATTATCGAAAACTTAAAGTGTTCAGAAGGTTTTATGCACACACGGATGCGACGTCGTGTTGAGTCTCTGATTCAGGCACTTGATCGTGCCAAGCCAGATGCAA
CCAATTCAAGGAAAAAAACACACAGCAGATCCTTCAAACGGCTGGTTAGTGATGGGAATGCTGGCTGA
Protein sequenceShow/hide protein sequence
MRKRGITFAKEAQVLTIFKKGKVQSTSKDDNPRKGKKQENVESDLDQASELSYSSPDNKEGKEDEIGGSDKENIIPEDFNLYCHDNEQEVGDWREVSDKPESSRSMQNIE
IDRSKEDNPKALAMIQGDEPNGGNKDTNGETDNFAISKEMIALLRKHNLCIRSMIGKTSKRGSAAQKKRSRESYLDVREMIEEFLLHPPFREKRRFLWQAGLCAVLWTLW
GKEITECLGGSRKTQGMHGLLGTKAAGNYQVGKLGVGFLIIENLKCSEGFMHTRMRRRVESLIQALDRAKPDATNSRKKTHSRSFKRLVSDGNAG