; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000056 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000056
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold6:23331483..23341736
RNA-Seq ExpressionSpg000056
SyntenySpg000056
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032889.1 hypothetical protein E6C27_scaffold81G00600 [Cucumis melo var. makuwa]3.1e-1659.3Show/hide
Query:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL
        M+SKS LHRLF+    S  RFT K+TS SL  TDPL+NNWF VQP NL P       +P VQ L+  LKGTT LLS KW+GVNS+L
Subjt:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL

KAA0043657.1 hypothetical protein E6C27_scaffold320G001060 [Cucumis melo var. makuwa]1.5e-1559.3Show/hide
Query:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL
        M+SKS LHRLF+    S  RFT K+TS SL  TDPL+NNWF VQP NL P        P VQ L+S LKGTT+LLS KW+ VN VL
Subjt:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL

KAA0045295.1 hypothetical protein E6C27_scaffold316G00550 [Cucumis melo var. makuwa]3.7e-1762.79Show/hide
Query:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL
        M+SK  LHR FV   RS  RFTS++TS SL  TDPL+NNWF VQP NL P        PFVQ L+S LKGTT LLS KW+GVNSVL
Subjt:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL

KAA0057124.1 hypothetical protein E6C27_scaffold153G00170 [Cucumis melo var. makuwa]1.2e-1558.24Show/hide
Query:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVLQDDVP
        M+SK  LHRLFV    S  RFT ++TS SL  TDPL+NNWF VQP NL P        PFVQ L+S LKGTT LLS KW+GVN VL    P
Subjt:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVLQDDVP

TYK04296.1 hypothetical protein E5676_scaffold527G00250 [Cucumis melo var. makuwa]1.2e-1559.3Show/hide
Query:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL
        M+SKS LHRLFV    S  RFT ++TS SL  TDPL+NNWF VQP N  P        P VQ L+S LKGTT LLS KW+GVNS+L
Subjt:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL

TrEMBL top hitse value%identityAlignment
A0A5A7TPD5 Uncharacterized protein7.5e-1659.3Show/hide
Query:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL
        M+SKS LHRLF+    S  RFT K+TS SL  TDPL+NNWF VQP NL P        P VQ L+S LKGTT+LLS KW+ VN VL
Subjt:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL

A0A5A7TV85 Uncharacterized protein1.8e-1762.79Show/hide
Query:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL
        M+SK  LHR FV   RS  RFTS++TS SL  TDPL+NNWF VQP NL P        PFVQ L+S LKGTT LLS KW+GVNSVL
Subjt:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL

A0A5A7UPJ1 Uncharacterized protein5.7e-1658.24Show/hide
Query:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVLQDDVP
        M+SK  LHRLFV    S  RFT ++TS SL  TDPL+NNWF VQP NL P        PFVQ L+S LKGTT LLS KW+GVN VL    P
Subjt:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVLQDDVP

A0A5D3C1K9 Uncharacterized protein5.7e-1659.3Show/hide
Query:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL
        M+SKS LHRLFV    S  RFT ++TS SL  TDPL+NNWF VQP N  P        P VQ L+S LKGTT LLS KW+GVNS+L
Subjt:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL

A0A5D3CGF6 Uncharacterized protein1.5e-1659.3Show/hide
Query:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL
        M+SKS LHRLF+    S  RFT K+TS SL  TDPL+NNWF VQP NL P       +P VQ L+  LKGTT LLS KW+GVNS+L
Subjt:  MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAGTAAGTCGACCCTTCACAGGTTGTTCGTAACTACAACTAGGTCAAATGTCCGTTTTACCTCTAAAGTTACATCTAGTTCCTTAAGTCTCACTGATCCTCTAAT
GAACAATTGGTTTGTGGTCCAACCACCAAACCTAATACCTCTCGGGCCAATGAGAGGGTGGGATCCCTTTGTTCAAGTCCTGGAGTCAGCACTTAAGGGAACAACCTCTC
TACTATCCCCGAAGTGGATAGGAGTGAATTCCGTCTTGCAAGACGACGTCCCCAACTATCTACCCGGTCTTATCCCGAAAATGGACCAGAAAATCGACCCAGAGGAAGAT
CGGACCAAATGGTCGGGCCAGCATGGCCCGACCCATATAGTCGGCCTCCGACAATTCGGCCCGCTTGCGCGGGCCGAACTCGGTCACCTCCTTTCGGTCCCTGATGCCCC
GAATCGCCCCGTCGCCTGGTTCGTCCCGAAACACCTCCGAATTCCTAAAAACCCTATGAGTAAAAACAGTTGCCGCCGTCTGTGGGGAAGAGTGCTTGCCAGTTCAGACC
GTGCATCGGTGGTGGTCTGCAGGATGGATCGAGTTCAGAAATCGGAAGGAAACCTCGGGTATGAGCAGAAAGCGTCGAGCCAGACTAGGGCGGACCTCGATAGGGAAAAG
GTCGACCCTAACTTCGAAGACGGTGTATGTACTGAGGAGGTTCTCGAGACAGATGGCCGAGCAGAGGTCGAGCCAGAGGATGAGCCCGAGGATGAGGCCGGGGCCGAGGC
CGAGCCTGAGGATAAGTCCGAGGCCGAAGATCCAAGGCCCGAGGTCGAGGATCTTGCAGATGGGGAGGGCATCCCATCGATTGAAACTGAACCCTCCCCTAAAGCAAGAG
AAGCTTCATGGATGGATCCGATCCTTGATTACTTTGAGAGAGGCGAGCTGCCAGCAGAGAAGACAAAGGCTAAAAAGGTCCTCAACCTCCCCAAGTCCCCAGCAGAGTGT
ACGCACCCCTGGGATGAACACAACACTTGGAGACAGGCTCGAGAATTTCCTCGACCTCCCCAAGTTTCCCCGACTGAGTGCATGCACCCTTGGGATGGAAAACAAGCAAG
CGAACAACACAGAGGAGCTGGTCGGCCTCATGCCAAGGCCGAGGCCGACCATCCAGAGGCCAGGGCCGAGCTCCACCCTCAAAGGCCCGGGTACGAAGTTAATTTTTCCT
TACTCAAAAAATGCATGTCCAAGATATTGAATACACATTTTGAGTGGGGGGTTGGGAATAAGGACAGACCGAGTCCATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAGTAAGTCGACCCTTCACAGGTTGTTCGTAACTACAACTAGGTCAAATGTCCGTTTTACCTCTAAAGTTACATCTAGTTCCTTAAGTCTCACTGATCCTCTAAT
GAACAATTGGTTTGTGGTCCAACCACCAAACCTAATACCTCTCGGGCCAATGAGAGGGTGGGATCCCTTTGTTCAAGTCCTGGAGTCAGCACTTAAGGGAACAACCTCTC
TACTATCCCCGAAGTGGATAGGAGTGAATTCCGTCTTGCAAGACGACGTCCCCAACTATCTACCCGGTCTTATCCCGAAAATGGACCAGAAAATCGACCCAGAGGAAGAT
CGGACCAAATGGTCGGGCCAGCATGGCCCGACCCATATAGTCGGCCTCCGACAATTCGGCCCGCTTGCGCGGGCCGAACTCGGTCACCTCCTTTCGGTCCCTGATGCCCC
GAATCGCCCCGTCGCCTGGTTCGTCCCGAAACACCTCCGAATTCCTAAAAACCCTATGAGTAAAAACAGTTGCCGCCGTCTGTGGGGAAGAGTGCTTGCCAGTTCAGACC
GTGCATCGGTGGTGGTCTGCAGGATGGATCGAGTTCAGAAATCGGAAGGAAACCTCGGGTATGAGCAGAAAGCGTCGAGCCAGACTAGGGCGGACCTCGATAGGGAAAAG
GTCGACCCTAACTTCGAAGACGGTGTATGTACTGAGGAGGTTCTCGAGACAGATGGCCGAGCAGAGGTCGAGCCAGAGGATGAGCCCGAGGATGAGGCCGGGGCCGAGGC
CGAGCCTGAGGATAAGTCCGAGGCCGAAGATCCAAGGCCCGAGGTCGAGGATCTTGCAGATGGGGAGGGCATCCCATCGATTGAAACTGAACCCTCCCCTAAAGCAAGAG
AAGCTTCATGGATGGATCCGATCCTTGATTACTTTGAGAGAGGCGAGCTGCCAGCAGAGAAGACAAAGGCTAAAAAGGTCCTCAACCTCCCCAAGTCCCCAGCAGAGTGT
ACGCACCCCTGGGATGAACACAACACTTGGAGACAGGCTCGAGAATTTCCTCGACCTCCCCAAGTTTCCCCGACTGAGTGCATGCACCCTTGGGATGGAAAACAAGCAAG
CGAACAACACAGAGGAGCTGGTCGGCCTCATGCCAAGGCCGAGGCCGACCATCCAGAGGCCAGGGCCGAGCTCCACCCTCAAAGGCCCGGGTACGAAGTTAATTTTTCCT
TACTCAAAAAATGCATGTCCAAGATATTGAATACACATTTTGAGTGGGGGGTTGGGAATAAGGACAGACCGAGTCCATCATAA
Protein sequenceShow/hide protein sequence
MLSKSTLHRLFVTTTRSNVRFTSKVTSSSLSLTDPLMNNWFVVQPPNLIPLGPMRGWDPFVQVLESALKGTTSLLSPKWIGVNSVLQDDVPNYLPGLIPKMDQKIDPEED
RTKWSGQHGPTHIVGLRQFGPLARAELGHLLSVPDAPNRPVAWFVPKHLRIPKNPMSKNSCRRLWGRVLASSDRASVVVCRMDRVQKSEGNLGYEQKASSQTRADLDREK
VDPNFEDGVCTEEVLETDGRAEVEPEDEPEDEAGAEAEPEDKSEAEDPRPEVEDLADGEGIPSIETEPSPKAREASWMDPILDYFERGELPAEKTKAKKVLNLPKSPAEC
THPWDEHNTWRQAREFPRPPQVSPTECMHPWDGKQASEQHRGAGRPHAKAEADHPEARAELHPQRPGYEVNFSLLKKCMSKILNTHFEWGVGNKDRPSPS