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Spg000072 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000072
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold6:21879509..21892214
RNA-Seq ExpressionSpg000072
SyntenySpg000072
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036627.1 hypothetical protein E6C27_scaffold191G001550 [Cucumis melo var. makuwa]5.0e-0738.26Show/hide
Query:  MFIFVGVLLISMDLIKVTSA-RRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKE------------VVQDKIIGDKLGNMDLDSSK
        M + VGVLLIS  LI++T A  R  N+G  +G V +VCS  DPRV++LH AN     +N    C                  Q   +  +  N+   SS+
Subjt:  MFIFVGVLLISMDLIKVTSA-RRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKE------------VVQDKIIGDKLGNMDLDSSK

Query:  EIKGGKNMVHPLPYI
        E KG KN+V PLPY+
Subjt:  EIKGGKNMVHPLPYI

KAE8646139.1 hypothetical protein Csa_016560, partial [Cucumis sativus]2.1e-0549.23Show/hide
Query:  MFIFVGVLLISMDLIKVTSA--RRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARC
        M +FVGVLLIS  LI++T A   R+ ++GPL   V +VCS  DPRV++LH AN     YN    C
Subjt:  MFIFVGVLLISMDLIKVTSA--RRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARC

XP_022136918.1 uncharacterized protein LOC111008495 [Momordica charantia]3.2e-0634.41Show/hide
Query:  MFIFVGVLLISMDLIKVTSARRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKEVV--QDKIIGDKLGNMDLDSSKEIKG
        M +F+G+LL+S  +I++T+A +  N+  LK DV   CS + P + +LH+AN+  R  +   RC   + +  ++KI GD   ++D D    +KG
Subjt:  MFIFVGVLLISMDLIKVTSARRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKEVV--QDKIIGDKLGNMDLDSSKEIKG

XP_022159360.1 uncharacterized protein LOC111025777 [Momordica charantia]1.0e-0436.46Show/hide
Query:  MFIFVGVLLISMDLIKVTSARRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKEVVQDKIIGDKLGNMDLDSSKEIKGGKNMV
        MFIFVG+LL  M +I +T+A R  ++ PL+GDV   CS   P + +LH AN   R      RC         II D    ++ D+  +IK  K  +
Subjt:  MFIFVGVLLISMDLIKVTSARRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKEVVQDKIIGDKLGNMDLDSSKEIKGGKNMV

TrEMBL top hitse value%identityAlignment
A0A0A0K4C8 Uncharacterized protein1.7e-0551.56Show/hide
Query:  MFIFVGVLLISMDLIKVTSA-RRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARC
        MF+FVG+LLIS  LI++T A  RS N+G  +G V +VCS  DPRV+ LH AN     YN    C
Subjt:  MFIFVGVLLISMDLIKVTSA-RRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARC

A0A0A0K7P8 Uncharacterized protein1.0e-0549.23Show/hide
Query:  MFIFVGVLLISMDLIKVTSA--RRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARC
        M +FVGVLLIS  LI++T A   R+ ++GPL   V +VCS  DPRV++LH AN     YN    C
Subjt:  MFIFVGVLLISMDLIKVTSA--RRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARC

A0A5D3BWB1 Uncharacterized protein2.4e-0738.26Show/hide
Query:  MFIFVGVLLISMDLIKVTSA-RRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKE------------VVQDKIIGDKLGNMDLDSSK
        M + VGVLLIS  LI++T A  R  N+G  +G V +VCS  DPRV++LH AN     +N    C                  Q   +  +  N+   SS+
Subjt:  MFIFVGVLLISMDLIKVTSA-RRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKE------------VVQDKIIGDKLGNMDLDSSK

Query:  EIKGGKNMVHPLPYI
        E KG KN+V PLPY+
Subjt:  EIKGGKNMVHPLPYI

A0A6J1C8U5 uncharacterized protein LOC1110084951.6e-0634.41Show/hide
Query:  MFIFVGVLLISMDLIKVTSARRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKEVV--QDKIIGDKLGNMDLDSSKEIKG
        M +F+G+LL+S  +I++T+A +  N+  LK DV   CS + P + +LH+AN+  R  +   RC   + +  ++KI GD   ++D D    +KG
Subjt:  MFIFVGVLLISMDLIKVTSARRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKEVV--QDKIIGDKLGNMDLDSSKEIKG

A0A6J1DYH7 uncharacterized protein LOC1110257775.0e-0536.46Show/hide
Query:  MFIFVGVLLISMDLIKVTSARRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKEVVQDKIIGDKLGNMDLDSSKEIKGGKNMV
        MFIFVG+LL  M +I +T+A R  ++ PL+GDV   CS   P + +LH AN   R      RC         II D    ++ D+  +IK  K  +
Subjt:  MFIFVGVLLISMDLIKVTSARRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKEVVQDKIIGDKLGNMDLDSSKEIKGGKNMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATTTTTGTTGGTGTTCTCCTTATTAGCATGGACCTGATTAAAGTTACAAGTGCAAGGAGATCTTTCAATCATGGTCCTCTTAAAGGTGATGTTGGTGTTGTATG
TAGTCTAAGAGATCCTAGAGTTTATGAACTACATGATGCTAACACAAATTTAAGAAGATATAATCCAACCGCTCGTTGCATGCCTAAAGAGGTTGTCCAAGATAAGATTA
TTGGAGATAAATTGGGAAATATGGATCTTGATAGCTCAAAAGAGATTAAAGGAGGCAAAAATATGGTTCATCCTCTGCCATACATTCCGCTAGTCGAAGACCCACAGTCG
TCGCCAGAGTTGCAACGCCGTCATCTCTCCTTTTCTCTCTCTCTCTCTCTCGATCACGCGATCTCTCTCTCTCGTGTTGCCGTGAAGCCGCACCGCTCGTTTCCCTTTCT
TTCTCTTCACGTCGTCCGACATTCTTGGGCGTTTTGGCGTCGTTTAGCGATTCTGCTGCAGCACCGTCAGGGTAGTCGATTGGGTTCGAATCGCTGTACGCTTAAATACC
CACTGCCTAAAGGTCTGTTGGTTTGGATGATGAGTTGGACCATGGTGGTGATGAGGAAGAGAACTACGAGGAGGAATCCTAGTGTGTTGGAGTTTCTTTTTGTTTATGCT
TTGAATAGGCTAGGCTGTGTACCTTATCCTGGTAACACTATGGATGCTGTCTACTTTGCAAATAAGGCAAATGACGTGATCTTGGATCTTTCATTTAGAGACATGCGAGA
TTATCCTTTGATCTGCATGGGTGAGAGTGGAAAATGGATGGAGGTGATTGACGTTGTTGATACGTCAGGTTTTGTGAAAACCGGGGATAAGCCTGGGTACCTTATCCTGG
TGACACTATGTGATACGACCCACTGTGTATTCGATACAGATGCATTGATCCAAAGCATCCATGTAGAAGACATGTTAATTGAGCTTAGGCCGTGTCTGGAGCTGATCACG
CTAATTGGTGTTAATTCGGACCAATTACGGAGTTTTTGGAGCCATCTCAATGTCTTGGACGGAGAGGAGGGGCAAGACCGAGTGGGTGCTGGGAACATAACAGTACAAGA
TGGAATTCACTCATTCCCCTATTGGGGATTGACTTACCGATATTGGTTGATATCCGTGGACACAGAAATATTCTACAGTGAAAAGAGTGCAGCTTTTAGTTCTCGTGGGA
TCGATACCCTTGGAATACTTCTAAGGCTCCCAGCAAGCGTAGCGTCGCGACGCTCTGACGTCATCTTTTCTTGGGCTCCATGTTGTCGCAACGTCGCGACGCTACATGGA
CAGCGTCGCAACGCTACCCCATTTCTGGATCTTTCCGCACGGCTGCCAAGCGTCGAGACGCTTCAGCCTAGCGTCGCGACGCTAGGCCCTGGATCTTCTAGAATGGCCCG
ATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCATTTTTGTTGGTGTTCTCCTTATTAGCATGGACCTGATTAAAGTTACAAGTGCAAGGAGATCTTTCAATCATGGTCCTCTTAAAGGTGATGTTGGTGTTGTATG
TAGTCTAAGAGATCCTAGAGTTTATGAACTACATGATGCTAACACAAATTTAAGAAGATATAATCCAACCGCTCGTTGCATGCCTAAAGAGGTTGTCCAAGATAAGATTA
TTGGAGATAAATTGGGAAATATGGATCTTGATAGCTCAAAAGAGATTAAAGGAGGCAAAAATATGGTTCATCCTCTGCCATACATTCCGCTAGTCGAAGACCCACAGTCG
TCGCCAGAGTTGCAACGCCGTCATCTCTCCTTTTCTCTCTCTCTCTCTCTCGATCACGCGATCTCTCTCTCTCGTGTTGCCGTGAAGCCGCACCGCTCGTTTCCCTTTCT
TTCTCTTCACGTCGTCCGACATTCTTGGGCGTTTTGGCGTCGTTTAGCGATTCTGCTGCAGCACCGTCAGGGTAGTCGATTGGGTTCGAATCGCTGTACGCTTAAATACC
CACTGCCTAAAGGTCTGTTGGTTTGGATGATGAGTTGGACCATGGTGGTGATGAGGAAGAGAACTACGAGGAGGAATCCTAGTGTGTTGGAGTTTCTTTTTGTTTATGCT
TTGAATAGGCTAGGCTGTGTACCTTATCCTGGTAACACTATGGATGCTGTCTACTTTGCAAATAAGGCAAATGACGTGATCTTGGATCTTTCATTTAGAGACATGCGAGA
TTATCCTTTGATCTGCATGGGTGAGAGTGGAAAATGGATGGAGGTGATTGACGTTGTTGATACGTCAGGTTTTGTGAAAACCGGGGATAAGCCTGGGTACCTTATCCTGG
TGACACTATGTGATACGACCCACTGTGTATTCGATACAGATGCATTGATCCAAAGCATCCATGTAGAAGACATGTTAATTGAGCTTAGGCCGTGTCTGGAGCTGATCACG
CTAATTGGTGTTAATTCGGACCAATTACGGAGTTTTTGGAGCCATCTCAATGTCTTGGACGGAGAGGAGGGGCAAGACCGAGTGGGTGCTGGGAACATAACAGTACAAGA
TGGAATTCACTCATTCCCCTATTGGGGATTGACTTACCGATATTGGTTGATATCCGTGGACACAGAAATATTCTACAGTGAAAAGAGTGCAGCTTTTAGTTCTCGTGGGA
TCGATACCCTTGGAATACTTCTAAGGCTCCCAGCAAGCGTAGCGTCGCGACGCTCTGACGTCATCTTTTCTTGGGCTCCATGTTGTCGCAACGTCGCGACGCTACATGGA
CAGCGTCGCAACGCTACCCCATTTCTGGATCTTTCCGCACGGCTGCCAAGCGTCGAGACGCTTCAGCCTAGCGTCGCGACGCTAGGCCCTGGATCTTCTAGAATGGCCCG
ATTTTGA
Protein sequenceShow/hide protein sequence
MFIFVGVLLISMDLIKVTSARRSFNHGPLKGDVGVVCSLRDPRVYELHDANTNLRRYNPTARCMPKEVVQDKIIGDKLGNMDLDSSKEIKGGKNMVHPLPYIPLVEDPQS
SPELQRRHLSFSLSLSLDHAISLSRVAVKPHRSFPFLSLHVVRHSWAFWRRLAILLQHRQGSRLGSNRCTLKYPLPKGLLVWMMSWTMVVMRKRTTRRNPSVLEFLFVYA
LNRLGCVPYPGNTMDAVYFANKANDVILDLSFRDMRDYPLICMGESGKWMEVIDVVDTSGFVKTGDKPGYLILVTLCDTTHCVFDTDALIQSIHVEDMLIELRPCLELIT
LIGVNSDQLRSFWSHLNVLDGEEGQDRVGAGNITVQDGIHSFPYWGLTYRYWLISVDTEIFYSEKSAAFSSRGIDTLGILLRLPASVASRRSDVIFSWAPCCRNVATLHG
QRRNATPFLDLSARLPSVETLQPSVATLGPGSSRMARF