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Spg000080 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000080
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein transport protein Sec61 subunit alpha-like
Genome locationscaffold6:23311205..23313232
RNA-Seq ExpressionSpg000080
SyntenySpg000080
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005048 - signal sequence binding (molecular function)
GO:0008320 - protein transmembrane transporter activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR002208 - SecY/SEC61-alpha family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8410248.1 hypothetical protein HHK36_002773 [Tetracentron sinense]1.5e-1458.54Show/hide
Query:  VNEAVVTRWLFFRYLVIGGRAMNDLFLVSSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTEL
        VNEAVV+ WLFFRY+VIGG A+ D   VS    + L+     I+F      G AYV LATVAGFIWWF+YSD+GPKL Y+EL
Subjt:  VNEAVVTRWLFFRYLVIGGRAMNDLFLVSSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTEL

KAG7020613.1 Calcium-transporting ATPase 3, endoplasmic reticulum-type [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2063Show/hide
Query:  VNEAVVTRWLFFRYLVIGGRAMNDL--FLV--------SSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTELFLLSLNLC
        VNEAVVT WLFFRYLVIGGRAMNDL  FL           ++C    +  +G KFLN  IIGAAYV LAT+AGFIWWFIYSDSGPKL Y E  L+S + C
Subjt:  VNEAVVTRWLFFRYLVIGGRAMNDL--FLV--------SSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTELFLLSLNLC

PTQ43246.1 hypothetical protein MARPO_0026s0117 [Marchantia polymorpha]2.8e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

XP_010647191.1 PREDICTED: protein transport protein Sec61 subunit alpha [Vitis vinifera]2.8e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

XP_028118409.1 protein transport protein Sec61 subunit alpha-like [Camellia sinensis]2.8e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

TrEMBL top hitse value%identityAlignment
A0A1S3TL35 protein transport protein Sec61 subunit alpha-like1.3e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

A0A6J1J053 protein transport protein Sec61 subunit alpha-like1.3e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

K4A9C7 Plug_translocon domain-containing protein1.3e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

K4A9D2 Plug_translocon domain-containing protein1.3e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

M5WHU9 Plug_translocon domain-containing protein1.3e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

SwissProt top hitse value%identityAlignment
Q2KHX4 Protein transport protein Sec61 subunit alpha isoform 25.8e-1477.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE I+WKAFSPTTIN+GRG EFEGAVIALFHLL T TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

Q8AY33 Protein transport protein Sec61 subunit alpha3.4e-1473.33Show/hide
Query:  LLSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        L++ N+CE I+WKAFSPTT+N+GRG EFEGA+IALFHLL T TDK
Subjt:  LLSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

Q90ZM2 Protein transport protein Sec61 subunit alpha-like 19.9e-1472.73Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE I+WKAFSPTT+N+GRG EFEGA+IALFHLL T TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

Q9H9S3 Protein transport protein Sec61 subunit alpha isoform 25.8e-1477.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE I+WKAFSPTTIN+GRG EFEGAVIALFHLL T TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

Q9JLR1 Protein transport protein Sec61 subunit alpha isoform 25.8e-1477.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE I+WKAFSPTTIN+GRG EFEGAVIALFHLL T TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

Arabidopsis top hitse value%identityAlignment
AT1G10130.1 endoplasmic reticulum-type calcium-transporting ATPase 35.1e-1348.78Show/hide
Query:  VNEAVVTRWLFFRYLVIGGRAMNDLFLVSSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTEL
        V EAVVT WLFFRYLVIG                                    YV LATVAGFIWWF+YSD GPKLTY+EL
Subjt:  VNEAVVTRWLFFRYLVIGGRAMNDLFLVSSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTEL

AT1G29310.1 SecY protein transport family protein4.1e-1577.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE+IIWKAFSPTTIN+GRGAEFEGAVIALFH+LIT ++K
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

AT1G78720.1 SecY protein transport family protein2.2e-1684.09Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE+IIWKAFSPTTINSGRGA+FEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

AT2G34250.1 SecY protein transport family protein4.1e-1577.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE+IIWKAFSPTTIN+GRGAEFEGAVIALFH+LIT ++K
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

AT2G34250.2 SecY protein transport family protein4.1e-1577.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE+IIWKAFSPTTIN+GRGAEFEGAVIALFH+LIT ++K
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGAATGAAGCTGTGGTGACTAGGTGGTTGTTCTTCCGTTATTTGGTAATTGGAGGTAGGGCAATGAATGACCTATTCTTGGTTTCTTCCATGGAATGTTTGTTGCTAGA
TATCTATGGCTCCGGTATAAAGTTTTTGAATGATGGTATCATTGGTGCAGCTTATGTTAGTCTTGCAACAGTTGCTGGTTTCATATGGTGGTTTATATACTCTGACAGTG
GTCCTAAGCTAACTTACACCGAGTTGTTCTTACTCTCATTGAACCTATGTGAGAACATTATCTGGAAGGCATTTAGTCCAACCACCATTAACAGTGGAAGAGGAGCTGAA
TTTGAAGGAGCTGTCATTGCATTGTTCCATCTGTTGATTACCATAACAGACAAG
mRNA sequenceShow/hide mRNA sequence
GTGAATGAAGCTGTGGTGACTAGGTGGTTGTTCTTCCGTTATTTGGTAATTGGAGGTAGGGCAATGAATGACCTATTCTTGGTTTCTTCCATGGAATGTTTGTTGCTAGA
TATCTATGGCTCCGGTATAAAGTTTTTGAATGATGGTATCATTGGTGCAGCTTATGTTAGTCTTGCAACAGTTGCTGGTTTCATATGGTGGTTTATATACTCTGACAGTG
GTCCTAAGCTAACTTACACCGAGTTGTTCTTACTCTCATTGAACCTATGTGAGAACATTATCTGGAAGGCATTTAGTCCAACCACCATTAACAGTGGAAGAGGAGCTGAA
TTTGAAGGAGCTGTCATTGCATTGTTCCATCTGTTGATTACCATAACAGACAAG
Protein sequenceShow/hide protein sequence
VNEAVVTRWLFFRYLVIGGRAMNDLFLVSSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTELFLLSLNLCENIIWKAFSPTTINSGRGAE
FEGAVIALFHLLITITDK