; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000087 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000087
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold6:21140356..21144297
RNA-Seq ExpressionSpg000087
SyntenySpg000087
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058006.1 uncharacterized protein E6C27_scaffold274G003110 [Cucumis melo var. makuwa]1.7e-1059.68Show/hide
Query:  NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRSKSTHNSDGTSIKYLKDWNS
        NDRS+S KN+S V+I SWISFW+ G + Y+KP  RK KK SRSKST NSDG+ I+  ++W+S
Subjt:  NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRSKSTHNSDGTSIKYLKDWNS

KAA0059873.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-1337.82Show/hide
Query:  MIDSQACWNSVMKVPRDFSLTSLYWEWLEL---------------------------NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRS
        +I+ Q  W +V KVP +F  T  YWEWLEL                           ND ++S KN+S V+I++W+SFW+ G + Y+K   +K KK S S
Subjt:  MIDSQACWNSVMKVPRDFSLTSLYWEWLEL---------------------------NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRS

Query:  KSTHNSDGTSIKYLKDWNS
        KST N DG+ I+  ++W+S
Subjt:  KSTHNSDGTSIKYLKDWNS

KAA0066963.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.3e-1338.33Show/hide
Query:  MIDSQACWNSVMKVPRDFSLTSLYWEWLEL-----------------------------------NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQR
        +I+ +  W +V KVP +F  T  YWEWL+L                                   NDR +S KN+  V+I SWISFW+ G + Y+KP  R
Subjt:  MIDSQACWNSVMKVPRDFSLTSLYWEWLEL-----------------------------------NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQR

Query:  KPKKTSRSKSTHNSDGTSIK
        K KK SRSKST N DG+ I+
Subjt:  KPKKTSRSKSTHNSDGTSIK

TYK02510.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.8e-1338.66Show/hide
Query:  MIDSQACWNSVMKVPRDFSLTSLYWEWL---------------------------ELNDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRS
        +I+ Q  W +V KVP +   T+ YWEWL                           E  DR++S KN+S V+I+SWISFW+ G + Y+K   RK KK SR 
Subjt:  MIDSQACWNSVMKVPRDFSLTSLYWEWL---------------------------ELNDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRS

Query:  KSTHNSDGTSIKYLKDWNS
        KST N DG+ I+  ++W+S
Subjt:  KSTHNSDGTSIKYLKDWNS

TYK05702.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.2e-2156.04Show/hide
Query:  MIDSQACWNSVMKVPRDFSLTSLYWEWLELNDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRSKSTHNSDGTSIKYLKDWN
        +I+ Q  W +V KVP +F  T  YWEWLE NDRS+S KN+S V+I SWISFW+ G++ Y+KP  RK KK SRSKST NSDG  I+  ++W+
Subjt:  MIDSQACWNSVMKVPRDFSLTSLYWEWLELNDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRSKSTHNSDGTSIKYLKDWN

TrEMBL top hitse value%identityAlignment
A0A5A7UV18 Uncharacterized protein8.3e-1159.68Show/hide
Query:  NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRSKSTHNSDGTSIKYLKDWNS
        NDRS+S KN+S V+I SWISFW+ G + Y+KP  RK KK SRSKST NSDG+ I+  ++W+S
Subjt:  NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRSKSTHNSDGTSIKYLKDWNS

A0A5A7UVA2 Putative mitochondrial protein6.2e-1437.82Show/hide
Query:  MIDSQACWNSVMKVPRDFSLTSLYWEWLEL---------------------------NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRS
        +I+ Q  W +V KVP +F  T  YWEWLEL                           ND ++S KN+S V+I++W+SFW+ G + Y+K   +K KK S S
Subjt:  MIDSQACWNSVMKVPRDFSLTSLYWEWLEL---------------------------NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRS

Query:  KSTHNSDGTSIKYLKDWNS
        KST N DG+ I+  ++W+S
Subjt:  KSTHNSDGTSIKYLKDWNS

A0A5D3BTQ8 Putative mitochondrial protein2.3e-1338.66Show/hide
Query:  MIDSQACWNSVMKVPRDFSLTSLYWEWL---------------------------ELNDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRS
        +I+ Q  W +V KVP +   T+ YWEWL                           E  DR++S KN+S V+I+SWISFW+ G + Y+K   RK KK SR 
Subjt:  MIDSQACWNSVMKVPRDFSLTSLYWEWL---------------------------ELNDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRS

Query:  KSTHNSDGTSIKYLKDWNS
        KST N DG+ I+  ++W+S
Subjt:  KSTHNSDGTSIKYLKDWNS

A0A5D3C3B2 Putative mitochondrial protein4.0e-2156.04Show/hide
Query:  MIDSQACWNSVMKVPRDFSLTSLYWEWLELNDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRSKSTHNSDGTSIKYLKDWN
        +I+ Q  W +V KVP +F  T  YWEWLE NDRS+S KN+S V+I SWISFW+ G++ Y+KP  RK KK SRSKST NSDG  I+  ++W+
Subjt:  MIDSQACWNSVMKVPRDFSLTSLYWEWLELNDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRSKSTHNSDGTSIKYLKDWN

A0A5D3E2X8 Putative mitochondrial protein3.1e-1338.33Show/hide
Query:  MIDSQACWNSVMKVPRDFSLTSLYWEWLEL-----------------------------------NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQR
        +I+ +  W +V KVP +F  T  YWEWL+L                                   NDR +S KN+  V+I SWISFW+ G + Y+KP  R
Subjt:  MIDSQACWNSVMKVPRDFSLTSLYWEWLEL-----------------------------------NDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQR

Query:  KPKKTSRSKSTHNSDGTSIK
        K KK SRSKST N DG+ I+
Subjt:  KPKKTSRSKSTHNSDGTSIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGATAGCCAAGCCTGTTGGAATTCTGTGATGAAGGTTCCTAGAGACTTCTCCCTCACTTCACTCTATTGGGAATGGTTGGAGCTGAATGACCGCAGCTCATCTTT
AAAGAATGAGTCTCATGTTAGCATTAACTCTTGGATATCTTTTTGGTTTAAAGGAGTTCAAAAGTATGAGAAACCCCCTCAGCGAAAACCAAAGAAAACCTCCCGCTCTA
AATCTACTCACAATTCAGATGGCACGAGTATCAAATATCTAAAGGATTGGAATTCCGTAATTCCATTAAATTCACCAACTGCTTGTGAAATAATCAAGAACTACTACGAA
CACCACCACTATGGCTACACCGATATGACTTTGAGACTTCTAGAGGCAGAAGACTGTCTCAGTTACTATTTCGCGGTCCAGTCTTATGCAAACTCATTGCATAGATACCC
CCACCCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAGTCACCTCTGAAAGATCCCCTTGAAGGCGTGGAGGAGCAACGCAGCGAGGAGT
CATTAACAAGTCCAAATGGTTTTGAGAATACTGCGAAACATATGATCGACTCCAAGGCGTTGTCCAACGAGAAAGTCGTGAGCCCTATTCCTCCTCCCAAGACTTCTGAA
AATCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGATAGCCAAGCCTGTTGGAATTCTGTGATGAAGGTTCCTAGAGACTTCTCCCTCACTTCACTCTATTGGGAATGGTTGGAGCTGAATGACCGCAGCTCATCTTT
AAAGAATGAGTCTCATGTTAGCATTAACTCTTGGATATCTTTTTGGTTTAAAGGAGTTCAAAAGTATGAGAAACCCCCTCAGCGAAAACCAAAGAAAACCTCCCGCTCTA
AATCTACTCACAATTCAGATGGCACGAGTATCAAATATCTAAAGGATTGGAATTCCGTAATTCCATTAAATTCACCAACTGCTTGTGAAATAATCAAGAACTACTACGAA
CACCACCACTATGGCTACACCGATATGACTTTGAGACTTCTAGAGGCAGAAGACTGTCTCAGTTACTATTTCGCGGTCCAGTCTTATGCAAACTCATTGCATAGATACCC
CCACCCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAGTCACCTCTGAAAGATCCCCTTGAAGGCGTGGAGGAGCAACGCAGCGAGGAGT
CATTAACAAGTCCAAATGGTTTTGAGAATACTGCGAAACATATGATCGACTCCAAGGCGTTGTCCAACGAGAAAGTCGTGAGCCCTATTCCTCCTCCCAAGACTTCTGAA
AATCATTAG
Protein sequenceShow/hide protein sequence
MIDSQACWNSVMKVPRDFSLTSLYWEWLELNDRSSSLKNESHVSINSWISFWFKGVQKYEKPPQRKPKKTSRSKSTHNSDGTSIKYLKDWNSVIPLNSPTACEIIKNYYE
HHHYGYTDMTLRLLEAEDCLSYYFAVQSYANSLHRYPHPHVSYMDALDHCICIEYKSPLKDPLEGVEEQRSEESLTSPNGFENTAKHMIDSKALSNEKVVSPIPPPKTSE
NH