; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000111 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000111
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-protease polyprotein
Genome locationscaffold6:23280725..23287726
RNA-Seq ExpressionSpg000111
SyntenySpg000111
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045295.1 hypothetical protein E6C27_scaffold316G00550 [Cucumis melo var. makuwa]4.3e-0550Show/hide
Query:  SEITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSIL
        SEITS SL    P+++N F VQP N N SRA+E+V PFVQD ++ LKG      +   G+NS+L
Subjt:  SEITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSIL
KAA0047449.1 hypothetical protein E6C27_scaffold498G00520 [Cucumis melo var. makuwa]7.8e-0776.32Show/hide
Query:  QTHCIGYPHLDVSYMNALDHCVCIKYKVGRIHSVTRIR
        QTHCIGYPH  V+YM+ALD CVCIKYK   IHSV RIR
Subjt:  QTHCIGYPHLDVSYMNALDHCVCIKYKVGRIHSVTRIR
KAA0047518.1 gag-protease polyprotein [Cucumis melo var. makuwa]4.2e-0843.62Show/hide
Query:  EITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSILCDYVPSSPLGL---------VPKLLEVTLSR
        EITS+SL    P+++N F VQP N+N SRA+E+V P VQD ++ LKG      +   G+N  L  YVPS PLG+         VP  L++ L R
Subjt:  EITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSILCDYVPSSPLGL---------VPKLLEVTLSR
KAA0056367.1 hypothetical protein E6C27_scaffold186G001040 [Cucumis melo var. makuwa]3.9e-0653.12Show/hide
Query:  SEITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSIL
        SEITS SL    P+++N F VQP N+N SRA+E+V P VQD ++ LKGI     + R G+NSIL
Subjt:  SEITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSIL
TYJ98643.1 hypothetical protein E5676_scaffold507G00280 [Cucumis melo var. makuwa]7.8e-0776.32Show/hide
Query:  QTHCIGYPHLDVSYMNALDHCVCIKYKVGRIHSVTRIR
        QTHCIGYPH  V+YM+ALD CVCIKYK   IHSV RIR
Subjt:  QTHCIGYPHLDVSYMNALDHCVCIKYKVGRIHSVTRIR
TrEMBL top hitse value%identityAlignment
A0A5A7TV85 Uncharacterized protein2.1e-0550Show/hide
Query:  SEITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSIL
        SEITS SL    P+++N F VQP N N SRA+E+V PFVQD ++ LKG      +   G+NS+L
Subjt:  SEITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSIL
A0A5A7U1U5 Uncharacterized protein3.8e-0776.32Show/hide
Query:  QTHCIGYPHLDVSYMNALDHCVCIKYKVGRIHSVTRIR
        QTHCIGYPH  V+YM+ALD CVCIKYK   IHSV RIR
Subjt:  QTHCIGYPHLDVSYMNALDHCVCIKYKVGRIHSVTRIR
A0A5D3BHA6 Uncharacterized protein3.8e-0776.32Show/hide
Query:  QTHCIGYPHLDVSYMNALDHCVCIKYKVGRIHSVTRIR
        QTHCIGYPH  V+YM+ALD CVCIKYK   IHSV RIR
Subjt:  QTHCIGYPHLDVSYMNALDHCVCIKYKVGRIHSVTRIR
A0A5D3DRY2 Gag-protease polyprotein2.0e-0843.62Show/hide
Query:  EITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSILCDYVPSSPLGL---------VPKLLEVTLSR
        EITS+SL    P+++N F VQP N+N SRA+E+V P VQD ++ LKG      +   G+N  L  YVPS PLG+         VP  L++ L R
Subjt:  EITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSILCDYVPSSPLGL---------VPKLLEVTLSR
A0A5D3E0A7 Uncharacterized protein1.9e-0653.12Show/hide
Query:  SEITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSIL
        SEITS SL    P+++N F VQP N+N SRA+E+V P VQD ++ LKGI     + R G+NSIL
Subjt:  SEITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGAGAGTGGCCTGTTCGTCGACTCAATAATCTTACCATTTCAGGGGCAAGACCGAATGGGGGCTGAGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTA
TTGGGGCTGTTCATTAGAGGGATCAGTGGTACTTAAGGATCCAGAGCTCCCACAAGTCGTTCTAAGGCCAGAGAATAGCGAGGAAGACGCTCGTGGTAGTCCAAAGCTTG
TTCGTGATCAAAGTATCCTCACGGTGTTAGTGAATTTCAGCTCAAAAGGTTGGAAAATGAAAAACTCTATTTTCAATTATTGTGGACCAAGCGTCAACAATTCTTGGGAA
CATTACCACTATGGCTACACCAGTATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGCCTTCAGGGGAATTCTCTGAGATTACCTCTACCTCCTTAAGTACGTG
TGCTCCTGTAATGAGCAACCTGTTTGTGGTCCAACCATCAAACAGAAACCTCTCTCGGGCCAGTGAGAGGGTAGAACCCTTTGTTCAAGATTCGGAGACACCACTTAAGG
GAATACTCATCTACTTCCTCAAAAGTCGGGAAGGATTGAATTCCATCTTGTGTGATTATGTTCCTAGCTCCCCACTCGGTCTTGTCCCCAAACTGCTAGAGGTTACTCTT
TCGCGGTTTGGTCTTACGCAAACTCATTGCATAGGATACCCCCACTTGGATGTTTCCTACATGAACGCGTTGGATCATTGCGTTTGTATCAAATACAAAGTGGGTCGTAT
CCATAGTGTCACTAGGATAAGATTGGTATGGGTGAAAGTGGTCAGCTACGCCGATTCAATAAGCTTGCCATTTCATGGGCAAGACCGAGTGGGGGCTAGGAACATAACAT
TACAAGATAAATTCACTCTTTCTCCATTAGGGCTTGTGACGGGGCTCCAATCGAGGCTTTCCTACGACGAATCATGGCGTAAGCAAGGGTTCGACGTCGGAATAAGTTCT
ATACCCTTTTTCCTTGAATACGATATTCGGTTTACTTACCGTCTCTTTTATTACTTGTGGCAACCTGAAAGCTCATTGTCGATGATTGAGGAATCATGTTGTTATGAGTC
TTCAACTACCGTCGTCGGAGTCTCGTGCGTACAAGTGGTAGTAGTTTTAAAGATTCGTCGAATAGAGGAAGAAGAATGTTGGCTCCTTGGAGAAGAAAGATCATTGACAG
GAGGAGAAAGCGGGAGGGGAAGGTGGCAGTTCAATGGAGAGGGAGATTCGGCTGGAGTAGAAGAAGAATCGGGGGAGTCTAACGATGTAGGAAATAGAGGAAAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGAGAGTGGCCTGTTCGTCGACTCAATAATCTTACCATTTCAGGGGCAAGACCGAATGGGGGCTGAGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTA
TTGGGGCTGTTCATTAGAGGGATCAGTGGTACTTAAGGATCCAGAGCTCCCACAAGTCGTTCTAAGGCCAGAGAATAGCGAGGAAGACGCTCGTGGTAGTCCAAAGCTTG
TTCGTGATCAAAGTATCCTCACGGTGTTAGTGAATTTCAGCTCAAAAGGTTGGAAAATGAAAAACTCTATTTTCAATTATTGTGGACCAAGCGTCAACAATTCTTGGGAA
CATTACCACTATGGCTACACCAGTATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGCCTTCAGGGGAATTCTCTGAGATTACCTCTACCTCCTTAAGTACGTG
TGCTCCTGTAATGAGCAACCTGTTTGTGGTCCAACCATCAAACAGAAACCTCTCTCGGGCCAGTGAGAGGGTAGAACCCTTTGTTCAAGATTCGGAGACACCACTTAAGG
GAATACTCATCTACTTCCTCAAAAGTCGGGAAGGATTGAATTCCATCTTGTGTGATTATGTTCCTAGCTCCCCACTCGGTCTTGTCCCCAAACTGCTAGAGGTTACTCTT
TCGCGGTTTGGTCTTACGCAAACTCATTGCATAGGATACCCCCACTTGGATGTTTCCTACATGAACGCGTTGGATCATTGCGTTTGTATCAAATACAAAGTGGGTCGTAT
CCATAGTGTCACTAGGATAAGATTGGTATGGGTGAAAGTGGTCAGCTACGCCGATTCAATAAGCTTGCCATTTCATGGGCAAGACCGAGTGGGGGCTAGGAACATAACAT
TACAAGATAAATTCACTCTTTCTCCATTAGGGCTTGTGACGGGGCTCCAATCGAGGCTTTCCTACGACGAATCATGGCGTAAGCAAGGGTTCGACGTCGGAATAAGTTCT
ATACCCTTTTTCCTTGAATACGATATTCGGTTTACTTACCGTCTCTTTTATTACTTGTGGCAACCTGAAAGCTCATTGTCGATGATTGAGGAATCATGTTGTTATGAGTC
TTCAACTACCGTCGTCGGAGTCTCGTGCGTACAAGTGGTAGTAGTTTTAAAGATTCGTCGAATAGAGGAAGAAGAATGTTGGCTCCTTGGAGAAGAAAGATCATTGACAG
GAGGAGAAAGCGGGAGGGGAAGGTGGCAGTTCAATGGAGAGGGAGATTCGGCTGGAGTAGAAGAAGAATCGGGGGAGTCTAACGATGTAGGAAATAGAGGAAAAAGATGA
Protein sequenceShow/hide protein sequence
MCESGLFVDSIILPFQGQDRMGAENITVQDGIHSFPYWGCSLEGSVVLKDPELPQVVLRPENSEEDARGSPKLVRDQSILTVLVNFSSKGWKMKNSIFNYCGPSVNNSWE
HYHYGYTSMTLRLLEAGDWWEPSGEFSEITSTSLSTCAPVMSNLFVVQPSNRNLSRASERVEPFVQDSETPLKGILIYFLKSREGLNSILCDYVPSSPLGLVPKLLEVTL
SRFGLTQTHCIGYPHLDVSYMNALDHCVCIKYKVGRIHSVTRIRLVWVKVVSYADSISLPFHGQDRVGARNITLQDKFTLSPLGLVTGLQSRLSYDESWRKQGFDVGISS
IPFFLEYDIRFTYRLFYYLWQPESSLSMIEESCCYESSTTVVGVSCVQVVVVLKIRRIEEEECWLLGEERSLTGGESGRGRWQFNGEGDSAGVEEESGESNDVGNRGKR