; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000118 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000118
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein
Genome locationscaffold6:23382403..23385270
RNA-Seq ExpressionSpg000118
SyntenySpg000118
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044644.1 F-box protein [Cucumis melo var. makuwa]2.0e-5593.86Show/hide
Query:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        MTCGAAREILIRDCWGLDD MFSFANNCWRVKLLLLEGCSLLTTEGLESVVL+WKELQSLEV+SCKNIKDSCIS ALSEVFSVLKNLKWRPD KSLLSS 
Subjt:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVGTCMGKKGGRFF
        L+GTCMGKKGGRFF
Subjt:  LVGTCMGKKGGRFF

XP_004146920.3 F-box protein At5g07670 [Cucumis sativus]1.5e-5594.74Show/hide
Query:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        MTCGAAREILIRDCWGLDD MFSFANNCWRVKLLLLEGCSLLTTEGLESVVL+WKELQSLEVVSCKNIKDSCIS ALSEVFSVLKNLKWRPD KSLLSS 
Subjt:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVGTCMGKKGGRFF
        L+GTCMGKKGGRFF
Subjt:  LVGTCMGKKGGRFF

XP_008453915.1 PREDICTED: F-box protein At5g07670-like [Cucumis melo]2.0e-5593.86Show/hide
Query:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        MTCGAAREILIRDCWGLDD MFSFANNCWRVKLLLLEGCSLLTTEGLESVVL+WKELQSLEV+SCKNIKDSCIS ALSEVFSVLKNLKWRPD KSLLSS 
Subjt:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVGTCMGKKGGRFF
        L+GTCMGKKGGRFF
Subjt:  LVGTCMGKKGGRFF

XP_023528926.1 F-box protein At5g07670-like [Cucurbita pepo subsp. pepo]3.4e-5594.74Show/hide
Query:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        MTCGAAREILIRDCWGLDD MFSFANNCWRVKLLLLEGCSLLTTEGLESVVL+WKELQSLEVVSCKNI+DSCIS ALSEVFSVLKNLKWRPD KSLLSS 
Subjt:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVGTCMGKKGGRFF
        LVGTCMGKKGGRFF
Subjt:  LVGTCMGKKGGRFF

XP_038874711.1 F-box protein At5g07670-like [Benincasa hispida]1.5e-5594.74Show/hide
Query:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        MTCGAAREILIRDCWGLDDG+FSFANNCWRVKLL LEGCSLLTTEGLESVVL+WKELQSLEVVSCKNIKDSCIS ALSEVFSVLKNLKWRPD KSLLSS 
Subjt:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVGTCMGKKGGRFF
        LVGTCMGKKGGRFF
Subjt:  LVGTCMGKKGGRFF

TrEMBL top hitse value%identityAlignment
A0A0A0KU32 Uncharacterized protein7.4e-5694.74Show/hide
Query:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        MTCGAAREILIRDCWGLDD MFSFANNCWRVKLLLLEGCSLLTTEGLESVVL+WKELQSLEVVSCKNIKDSCIS ALSEVFSVLKNLKWRPD KSLLSS 
Subjt:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVGTCMGKKGGRFF
        L+GTCMGKKGGRFF
Subjt:  LVGTCMGKKGGRFF

A0A1S3BXD5 F-box protein At5g07670-like9.7e-5693.86Show/hide
Query:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        MTCGAAREILIRDCWGLDD MFSFANNCWRVKLLLLEGCSLLTTEGLESVVL+WKELQSLEV+SCKNIKDSCIS ALSEVFSVLKNLKWRPD KSLLSS 
Subjt:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVGTCMGKKGGRFF
        L+GTCMGKKGGRFF
Subjt:  LVGTCMGKKGGRFF

A0A5A7TNE8 F-box protein9.7e-5693.86Show/hide
Query:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        MTCGAAREILIRDCWGLDD MFSFANNCWRVKLLLLEGCSLLTTEGLESVVL+WKELQSLEV+SCKNIKDSCIS ALSEVFSVLKNLKWRPD KSLLSS 
Subjt:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVGTCMGKKGGRFF
        L+GTCMGKKGGRFF
Subjt:  LVGTCMGKKGGRFF

A0A5D3D135 F-box protein9.7e-5693.86Show/hide
Query:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        MTCGAAREILIRDCWGLDD MFSFANNCWRVKLLLLEGCSLLTTEGLESVVL+WKELQSLEV+SCKNIKDSCIS ALSEVFSVLKNLKWRPD KSLLSS 
Subjt:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVGTCMGKKGGRFF
        L+GTCMGKKGGRFF
Subjt:  LVGTCMGKKGGRFF

A0A6J1HX14 F-box protein At5g07670-like1.7e-5594.74Show/hide
Query:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        MTCGAAREILIRDCWGLDD MFSFANNCWRVKLLLLEGCSLLTTEGLESVVL+WKELQSLEVVSCKNI+DSCIS ALSEVFSVLKNLKWRPD KSLLSS 
Subjt:  MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVGTCMGKKGGRFF
        LVGTCMGKKGGRFF
Subjt:  LVGTCMGKKGGRFF

SwissProt top hitse value%identityAlignment
Q708Y0 EIN3-binding F-box protein 24.4e-0527.18Show/hide
Query:  TCGAAREILIRDCWGL-DDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        +C    ++ +  C G+ D G+ + A NC  +  L ++ CS +  EGL ++      L+S+ + SC  I D  ++  L++  S L  +K +    S LS  
Subjt:  TCGAAREILIRDCWGL-DDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVG
        ++G
Subjt:  LVG

Q8VYT5 F-box protein At5g076702.4e-3565.18Show/hide
Query:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV
        C AAREI+ +DCWGLD+ +FS A    RVKLL LEGCSLLTT GLESV+L W EL+ L+VVSCKNIKDS +S +LS +FS L  L+WRPD +S LSS L 
Subjt:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV

Query:  GTCMGKKGGRFF
        GT +G+KGG+FF
Subjt:  GTCMGKKGGRFF

Q9CZV8 F-box/LRR-repeat protein 207.5e-0530.28Show/hide
Query:  GAAREILIRDCWGL-DDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLK--NLKWRPDAKSLLSSC
        G  R++ +R C G+ D+ + +FA NC  +++L L GC+  T     S+     +L+ L++ SC +I +  +  ALSE   +L+  N+ W           
Subjt:  GAAREILIRDCWGL-DDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLK--NLKWRPDAKSLLSSC

Query:  LVGTCMGKK
        LV  C G K
Subjt:  LVGTCMGKK

Q9FGN3 F-box protein At5g513801.0e-3361.61Show/hide
Query:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV
        C    ++ I+DCWGLDD  FS A    RV+ L LEGCS+LTT GLESV+L W+EL+S+ VVSCKNIKDS IS ALS +FS+LK L WRPD +S LSS L 
Subjt:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV

Query:  GTCMGKKGGRFF
        GT +GK+G +FF
Subjt:  GTCMGKKGGRFF

Q9FGN4 F-box protein At5g513708.0e-3158.93Show/hide
Query:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV
        C  A E+ I+DCWGL D  FS A    RV+ L LEGCS+LT+ GLESV+L W+EL+S+ VVSCK+IKDS IS ALS +FS+LK L WRPD +S LSS L 
Subjt:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV

Query:  GTCMGKKGGRFF
        G  +G +G +FF
Subjt:  GTCMGKKGGRFF

Arabidopsis top hitse value%identityAlignment
AT5G07670.1 RNI-like superfamily protein1.7e-3665.18Show/hide
Query:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV
        C AAREI+ +DCWGLD+ +FS A    RVKLL LEGCSLLTT GLESV+L W EL+ L+VVSCKNIKDS +S +LS +FS L  L+WRPD +S LSS L 
Subjt:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV

Query:  GTCMGKKGGRFF
        GT +G+KGG+FF
Subjt:  GTCMGKKGGRFF

AT5G23340.1 RNI-like superfamily protein4.5e-0530.99Show/hide
Query:  DDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLK
        D+ + S +  C  ++ L L+GC+ +T  GL  +V   ++++SL++  C N+ D+ +S       S LK LK
Subjt:  DDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLK

AT5G25350.1 EIN3-binding F box protein 23.1e-0627.18Show/hide
Query:  TCGAAREILIRDCWGL-DDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC
        +C    ++ +  C G+ D G+ + A NC  +  L ++ CS +  EGL ++      L+S+ + SC  I D  ++  L++  S L  +K +    S LS  
Subjt:  TCGAAREILIRDCWGL-DDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSC

Query:  LVG
        ++G
Subjt:  LVG

AT5G51370.2 RNI-like superfamily protein5.7e-3258.93Show/hide
Query:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV
        C  A E+ I+DCWGL D  FS A    RV+ L LEGCS+LT+ GLESV+L W+EL+S+ VVSCK+IKDS IS ALS +FS+LK L WRPD +S LSS L 
Subjt:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV

Query:  GTCMGKKGGRFF
        G  +G +G +FF
Subjt:  GTCMGKKGGRFF

AT5G51380.1 RNI-like superfamily protein7.1e-3561.61Show/hide
Query:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV
        C    ++ I+DCWGLDD  FS A    RV+ L LEGCS+LTT GLESV+L W+EL+S+ VVSCKNIKDS IS ALS +FS+LK L WRPD +S LSS L 
Subjt:  CGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLV

Query:  GTCMGKKGGRFF
        GT +GK+G +FF
Subjt:  GTCMGKKGGRFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATGTGGGGCTGCAAGGGAGATTTTGATCCGGGACTGCTGGGGATTGGATGATGGCATGTTCAGCTTTGCAAATAACTGCTGGAGGGTGAAGTTACTTTTGCTTGA
AGGATGTTCATTGTTAACGACAGAAGGCTTGGAGTCAGTAGTTCTTGAGTGGAAGGAGCTTCAAAGCCTCGAAGTTGTATCGTGTAAGAATATAAAAGATAGCTGCATCT
CTCTTGCTCTTTCTGAAGTCTTCTCTGTTCTTAAGAATTTGAAATGGAGGCCAGATGCCAAATCGCTTCTCTCGTCGTGTCTGGTCGGGACGTGTATGGGAAAGAAAGGT
GGGAGGTTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATGTGGGGCTGCAAGGGAGATTTTGATCCGGGACTGCTGGGGATTGGATGATGGCATGTTCAGCTTTGCAAATAACTGCTGGAGGGTGAAGTTACTTTTGCTTGA
AGGATGTTCATTGTTAACGACAGAAGGCTTGGAGTCAGTAGTTCTTGAGTGGAAGGAGCTTCAAAGCCTCGAAGTTGTATCGTGTAAGAATATAAAAGATAGCTGCATCT
CTCTTGCTCTTTCTGAAGTCTTCTCTGTTCTTAAGAATTTGAAATGGAGGCCAGATGCCAAATCGCTTCTCTCGTCGTGTCTGGTCGGGACGTGTATGGGAAAGAAAGGT
GGGAGGTTTTTCTAG
Protein sequenceShow/hide protein sequence
MTCGAAREILIRDCWGLDDGMFSFANNCWRVKLLLLEGCSLLTTEGLESVVLEWKELQSLEVVSCKNIKDSCISLALSEVFSVLKNLKWRPDAKSLLSSCLVGTCMGKKG
GRFF