; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000135 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000135
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold6:21431683..21433953
RNA-Seq ExpressionSpg000135
SyntenySpg000135
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]2.1e-2749.19Show/hide
Query:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW
        MVYF E   SG ++LVIL D++QP ++G +L+VE+P +   +D WP L++   LP LSVE  LS+ +  W+LQSSIH +A N    LT+G+++I+ + RW
Subjt:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW

Query:  NSVKKVPRDFSFTSLYWEWLELVI
         +V KVP +F FT  YWEWLELV+
Subjt:  NSVKKVPRDFSFTSLYWEWLELVI

KAA0055892.1 hypothetical protein E6C27_scaffold438G00100 [Cucumis melo var. makuwa]9.6e-2826.72Show/hide
Query:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW
        MVYF E   SG ++LVIL D++QP ++G +L+VE+P +   +D WP L++   LP LSVE  LS+ +  W+LQSSIH +A N S   T+G+++I+ + RW
Subjt:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW

Query:  NSVKKVPRDFSFTSLYWE----------WL-----------ELVIS------------------------------------------------------
         +V KVP +F FT  YWE          W            EL IS                                                      
Subjt:  NSVKKVPRDFSFTSLYWE----------WL-----------ELVIS------------------------------------------------------

Query:  SSKNDRSSSSKNES--------------------------------------------------------------------------------------
        + +NDRS+SSKN+S                                                                                      
Subjt:  SSKNDRSSSSKNES--------------------------------------------------------------------------------------

Query:  ----------------------------------------------------HLVGNVIPSPSRSKLPKNNGGNHGGKKIRLPEDDTFVPVQNASKHGET
                                                            HLV +VIP PS+ +LPKN G N GGK+IRL E       +   KH + 
Subjt:  ----------------------------------------------------HLVGNVIPSPSRSKLPKNNGGNHGGKKIRLPEDDTFVPVQNASKHGET

Query:  SCSSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSTSQFPSPPPILSTLKDPLEGVEEQRSEESLTSPNVFYNTEKHMGDSKALSN---EKAMSPN
        S SS  D HWKRP KK KVS  + D    G+ S  + P  PP LS L D LEG+ E  ++ESL  P+   +  + +G SK   N   E+++SP+
Subjt:  SCSSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSTSQFPSPPPILSTLKDPLEGVEEQRSEESLTSPNVFYNTEKHMGDSKALSN---EKAMSPN

KAA0057574.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-2749.19Show/hide
Query:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW
        MVYF E   SG ++LVIL D++QP ++G +L+VE+P +   +D WP L++   LP LSVE  LS+ +  W+LQSSIH +A N    LT+G+++I+ + RW
Subjt:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW

Query:  NSVKKVPRDFSFTSLYWEWLELVI
         +V KVP +F FT  YWEWLELV+
Subjt:  NSVKKVPRDFSFTSLYWEWLELVI

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]3.3e-2850.81Show/hide
Query:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW
        MVYF E   SG ++LVIL D++QP ++G +L+VE+P +   +D WP L++   LP LSVE  LS+ +  WILQSSIH +A N    LT+G+++I+ + RW
Subjt:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW

Query:  NSVKKVPRDFSFTSLYWEWLELVI
         +V KVPR+F FT  YWEWLELV+
Subjt:  NSVKKVPRDFSFTSLYWEWLELVI

KAA0066963.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.6e-2826.43Show/hide
Query:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW
        MVYF E   SG ++L IL D++QP ++G  L+VE+P +   +D WP+L++   LP L VE  LS+ +  W+LQSSIH +A N    LT+G+++I+ K RW
Subjt:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW

Query:  NSVKKVPRDFSFTSLYWEWLELVIS-----------------------------SSKNDRSSSSKNE---------------------------------
         +V KVP +F FT  YWEWL+LV++                               +NDR +SSKN+                                 
Subjt:  NSVKKVPRDFSFTSLYWEWLELVIS-----------------------------SSKNDRSSSSKNE---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------SHLVGNVIPSPSRSKLPKNNGGNHGGKKIRLPEDDTFVPVQNASKHGETSCSSSHDHHWKRPP
                                              HLV + IP PS+ +LPKN G N GGK+IRL E       +  ++H + S SS  D HWKR  
Subjt:  -------------------------------------SHLVGNVIPSPSRSKLPKNNGGNHGGKKIRLPEDDTFVPVQNASKHGETSCSSSHDHHWKRPP

Query:  KKTKVSSTNVDNSFDGVPSTSQFPSPPPILSTLKDPLEGVEEQRSEESLTSPNVFYNTEKHMGDSKALSNEKA
        KK KVS  N D    G+ S  + P  PP LS L D LEG+     +ESLT P+   +  K +G SK   N+ A
Subjt:  KKTKVSSTNVDNSFDGVPSTSQFPSPPPILSTLKDPLEGVEEQRSEESLTSPNVFYNTEKHMGDSKALSNEKA

TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein1.0e-2749.19Show/hide
Query:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW
        MVYF E   SG ++LVIL D++QP ++G +L+VE+P +   +D WP L++   LP LSVE  LS+ +  W+LQSSIH +A N    LT+G+++I+ + RW
Subjt:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW

Query:  NSVKKVPRDFSFTSLYWEWLELVI
         +V KVP +F FT  YWEWLELV+
Subjt:  NSVKKVPRDFSFTSLYWEWLELVI

A0A5A7UJ48 PMD domain-containing protein4.7e-2826.72Show/hide
Query:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW
        MVYF E   SG ++LVIL D++QP ++G +L+VE+P +   +D WP L++   LP LSVE  LS+ +  W+LQSSIH +A N S   T+G+++I+ + RW
Subjt:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW

Query:  NSVKKVPRDFSFTSLYWE----------WL-----------ELVIS------------------------------------------------------
         +V KVP +F FT  YWE          W            EL IS                                                      
Subjt:  NSVKKVPRDFSFTSLYWE----------WL-----------ELVIS------------------------------------------------------

Query:  SSKNDRSSSSKNES--------------------------------------------------------------------------------------
        + +NDRS+SSKN+S                                                                                      
Subjt:  SSKNDRSSSSKNES--------------------------------------------------------------------------------------

Query:  ----------------------------------------------------HLVGNVIPSPSRSKLPKNNGGNHGGKKIRLPEDDTFVPVQNASKHGET
                                                            HLV +VIP PS+ +LPKN G N GGK+IRL E       +   KH + 
Subjt:  ----------------------------------------------------HLVGNVIPSPSRSKLPKNNGGNHGGKKIRLPEDDTFVPVQNASKHGET

Query:  SCSSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSTSQFPSPPPILSTLKDPLEGVEEQRSEESLTSPNVFYNTEKHMGDSKALSN---EKAMSPN
        S SS  D HWKRP KK KVS  + D    G+ S  + P  PP LS L D LEG+ E  ++ESL  P+   +  + +G SK   N   E+++SP+
Subjt:  SCSSSHDHHWKRPPKKTKVSSTNVDNSFDGVPSTSQFPSPPPILSTLKDPLEGVEEQRSEESLTSPNVFYNTEKHMGDSKALSN---EKAMSPN

A0A5A7UR46 Putative mitochondrial protein6.1e-2849.19Show/hide
Query:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW
        MVYF E   SG ++LVIL D++QP ++G +L+VE+P +   +D WP L++   LP LSVE  LS+ +  W+LQSSIH +A N    LT+G+++I+ + RW
Subjt:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW

Query:  NSVKKVPRDFSFTSLYWEWLELVI
         +V KVP +F FT  YWEWLELV+
Subjt:  NSVKKVPRDFSFTSLYWEWLELVI

A0A5A7VHW8 PMD domain-containing protein1.6e-2850.81Show/hide
Query:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW
        MVYF E   SG ++LVIL D++QP ++G +L+VE+P +   +D WP L++   LP LSVE  LS+ +  WILQSSIH +A N    LT+G+++I+ + RW
Subjt:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW

Query:  NSVKKVPRDFSFTSLYWEWLELVI
         +V KVPR+F FT  YWEWLELV+
Subjt:  NSVKKVPRDFSFTSLYWEWLELVI

A0A5D3E2X8 Putative mitochondrial protein2.7e-2826.43Show/hide
Query:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW
        MVYF E   SG ++L IL D++QP ++G  L+VE+P +   +D WP+L++   LP L VE  LS+ +  W+LQSSIH +A N    LT+G+++I+ K RW
Subjt:  MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARW

Query:  NSVKKVPRDFSFTSLYWEWLELVIS-----------------------------SSKNDRSSSSKNE---------------------------------
         +V KVP +F FT  YWEWL+LV++                               +NDR +SSKN+                                 
Subjt:  NSVKKVPRDFSFTSLYWEWLELVIS-----------------------------SSKNDRSSSSKNE---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------SHLVGNVIPSPSRSKLPKNNGGNHGGKKIRLPEDDTFVPVQNASKHGETSCSSSHDHHWKRPP
                                              HLV + IP PS+ +LPKN G N GGK+IRL E       +  ++H + S SS  D HWKR  
Subjt:  -------------------------------------SHLVGNVIPSPSRSKLPKNNGGNHGGKKIRLPEDDTFVPVQNASKHGETSCSSSHDHHWKRPP

Query:  KKTKVSSTNVDNSFDGVPSTSQFPSPPPILSTLKDPLEGVEEQRSEESLTSPNVFYNTEKHMGDSKALSNEKA
        KK KVS  N D    G+ S  + P  PP LS L D LEG+     +ESLT P+   +  K +G SK   N+ A
Subjt:  KKTKVSSTNVDNSFDGVPSTSQFPSPPPILSTLKDPLEGVEEQRSEESLTSPNVFYNTEKHMGDSKALSNEKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATACTTCGCTGAGCATATCTCCTCTGGGAAGAAATATCTTGTCATTCTCAAGGACAAAGATCAACCTACTAAAAACGGGTTTAATCTTCTGGTTGAGGAACCAAA
GTCTGACCCTCTTTCAGACCTATGGCCTAATTTAAATGATGTCGTATTTTTACCCGAACTATCAGTGGAAAAGGTTTTAAGCCAAGAAGAACGAGTGTGGATTTTACAAT
CCTCAATCCATCCTAAGGCTTACAACCGAAGTCCAGAGTTGACTATAGGACGTCAAATGATAGATAGCAAAGCCCGTTGGAATTCTGTGAAGAAGGTTCCTAGAGACTTC
TCCTTCACTTCACTCTATTGGGAATGGTTGGAGTTGGTTATATCCTCATCAAAGAATGACCGCAGCTCATCTTCGAAGAATGAGTCTCATTTAGTGGGCAATGTCATTCC
TTCTCCATCTCGTTCTAAACTACCCAAAAATAATGGGGGTAATCACGGAGGAAAGAAGATTCGCTTGCCCGAGGATGACACTTTTGTTCCTGTACAAAATGCTTCAAAAC
ATGGTGAAACAAGCTGCAGCAGTTCTCACGATCATCATTGGAAGAGACCACCCAAGAAAACAAAGGTGTCTTCCACGAATGTAGATAACTCTTTTGATGGGGTTCCAAGC
ACTTCTCAATTTCCTAGTCCTCCTCCAATTTTGTCAACTCTAAAAGATCCCCTTGAAGGAGTGGAGGAGCAACGCAGCGAGGAGTCATTAACAAGTCCAAATGTTTTTTA
CAATACTGAGAAGCATATGGGTGACTCCAAGGCATTGTCCAACGAGAAAGCCATGAGCCCTAATCCTCCTCCTAAGACTTCTGAAAGTCATCAGCATAATCAAAAGAGAG
CAATCGATGTGGATCCTGAAGCTTCCCATATTGTGCTGACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATACTTCGCTGAGCATATCTCCTCTGGGAAGAAATATCTTGTCATTCTCAAGGACAAAGATCAACCTACTAAAAACGGGTTTAATCTTCTGGTTGAGGAACCAAA
GTCTGACCCTCTTTCAGACCTATGGCCTAATTTAAATGATGTCGTATTTTTACCCGAACTATCAGTGGAAAAGGTTTTAAGCCAAGAAGAACGAGTGTGGATTTTACAAT
CCTCAATCCATCCTAAGGCTTACAACCGAAGTCCAGAGTTGACTATAGGACGTCAAATGATAGATAGCAAAGCCCGTTGGAATTCTGTGAAGAAGGTTCCTAGAGACTTC
TCCTTCACTTCACTCTATTGGGAATGGTTGGAGTTGGTTATATCCTCATCAAAGAATGACCGCAGCTCATCTTCGAAGAATGAGTCTCATTTAGTGGGCAATGTCATTCC
TTCTCCATCTCGTTCTAAACTACCCAAAAATAATGGGGGTAATCACGGAGGAAAGAAGATTCGCTTGCCCGAGGATGACACTTTTGTTCCTGTACAAAATGCTTCAAAAC
ATGGTGAAACAAGCTGCAGCAGTTCTCACGATCATCATTGGAAGAGACCACCCAAGAAAACAAAGGTGTCTTCCACGAATGTAGATAACTCTTTTGATGGGGTTCCAAGC
ACTTCTCAATTTCCTAGTCCTCCTCCAATTTTGTCAACTCTAAAAGATCCCCTTGAAGGAGTGGAGGAGCAACGCAGCGAGGAGTCATTAACAAGTCCAAATGTTTTTTA
CAATACTGAGAAGCATATGGGTGACTCCAAGGCATTGTCCAACGAGAAAGCCATGAGCCCTAATCCTCCTCCTAAGACTTCTGAAAGTCATCAGCATAATCAAAAGAGAG
CAATCGATGTGGATCCTGAAGCTTCCCATATTGTGCTGACACATTGA
Protein sequenceShow/hide protein sequence
MVYFAEHISSGKKYLVILKDKDQPTKNGFNLLVEEPKSDPLSDLWPNLNDVVFLPELSVEKVLSQEERVWILQSSIHPKAYNRSPELTIGRQMIDSKARWNSVKKVPRDF
SFTSLYWEWLELVISSSKNDRSSSSKNESHLVGNVIPSPSRSKLPKNNGGNHGGKKIRLPEDDTFVPVQNASKHGETSCSSSHDHHWKRPPKKTKVSSTNVDNSFDGVPS
TSQFPSPPPILSTLKDPLEGVEEQRSEESLTSPNVFYNTEKHMGDSKALSNEKAMSPNPPPKTSESHQHNQKRAIDVDPEASHIVLTH