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Spg000156 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000156
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold6:21236657..21240099
RNA-Seq ExpressionSpg000156
SyntenySpg000156
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136676.1 uncharacterized protein LOC111008328 [Momordica charantia]2.5e-0441.67Show/hide
Query:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGL
        +WAYET+S+L+ RVA R+++  IPR+LRWSC++  ++  +   +F+ +
Subjt:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGL

XP_022154965.1 uncharacterized protein LOC111022110 [Momordica charantia]2.5e-0441.67Show/hide
Query:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGL
        +WAYET+S+L+ RVA R+++  IPR+LRWSC++  ++  +   +F+ +
Subjt:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGL

XP_022156879.1 putative F-box protein At4g17565 [Momordica charantia]1.4e-0533.33Show/hide
Query:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGLDQQNWVKNCLVQCDSDRRKAVDKLAASIDVQVL
        +W YET+S+L+ RVA R+S+  IPR+LRWSC++   +  +A  +FD  + ++ VK  L   D+ +++ +D++   ++  ++
Subjt:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGLDQQNWVKNCLVQCDSDRRKAVDKLAASIDVQVL

XP_038881592.1 uncharacterized protein LOC120073060 [Benincasa hispida]1.5e-0460Show/hide
Query:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTI
        IWA++T+SSL GRVAN +SE   P I +WSCSHF S+  I
Subjt:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTI

XP_038893529.1 uncharacterized protein LOC120082434 [Benincasa hispida]6.7e-0554.35Show/hide
Query:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFD
        +W YE +SS+ G VA R S+  IPRILRWSCSH  S+ T+   IF+
Subjt:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFD

TrEMBL top hitse value%identityAlignment
A0A6J1C463 uncharacterized protein LOC1110083281.2e-0441.67Show/hide
Query:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGL
        +WAYET+S+L+ RVA R+++  IPR+LRWSC++  ++  +   +F+ +
Subjt:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGL

A0A6J1DL40 uncharacterized protein LOC1110221101.2e-0441.67Show/hide
Query:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGL
        +WAYET+S+L+ RVA R+++  IPR+LRWSC++  ++  +   +F+ +
Subjt:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGL

A0A6J1DRZ7 uncharacterized protein LOC1110238471.2e-0441.67Show/hide
Query:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGL
        +WAYET+S+L+ RVA R+++  IPR+LRWSC++  ++  +   +F+ +
Subjt:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGL

A0A6J1DUW8 putative F-box protein At4g175656.5e-0633.33Show/hide
Query:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGLDQQNWVKNCLVQCDSDRRKAVDKLAASIDVQVL
        +W YET+S+L+ RVA R+S+  IPR+LRWSC++   +  +A  +FD  + ++ VK  L   D+ +++ +D++   ++  ++
Subjt:  IWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGLDQQNWVKNCLVQCDSDRRKAVDKLAASIDVQVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCCAGTCTCGATTTCGACCGGGAATTAAGGCAGGGGCTTATATGGGCATACGAGACTGTTTCGTCTCTCACTGGGCGTGTTGCCAATCGAATAAGTGAGACGGA
CATCCCACGCATCCTTCGATGGTCTTGCTCCCACTTCTCATCTTACACGACCATTGCTGACCCCATTTTCGATGGTCTTGATCAACAGAATTGGGTGAAAAATTGCTTAG
TACAGTGTGATAGTGACAGGAGGAAGGCGGTTGACAAGCTTGCAGCGTCCATTGATGTGCAAGTGTTGGTTCGAGTTTATGATGACGGTGGCACCTTCGATGGTGGTTGG
TCGTCAACGGCAAGCGACAGAGAAAAGGAGAAGAGATCGGAGATGAAGAGGGAGAGGAAAGCCGTGAGAAAGAGGGAGAGACCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCCAGTCTCGATTTCGACCGGGAATTAAGGCAGGGGCTTATATGGGCATACGAGACTGTTTCGTCTCTCACTGGGCGTGTTGCCAATCGAATAAGTGAGACGGA
CATCCCACGCATCCTTCGATGGTCTTGCTCCCACTTCTCATCTTACACGACCATTGCTGACCCCATTTTCGATGGTCTTGATCAACAGAATTGGGTGAAAAATTGCTTAG
TACAGTGTGATAGTGACAGGAGGAAGGCGGTTGACAAGCTTGCAGCGTCCATTGATGTGCAAGTGTTGGTTCGAGTTTATGATGACGGTGGCACCTTCGATGGTGGTTGG
TCGTCAACGGCAAGCGACAGAGAAAAGGAGAAGAGATCGGAGATGAAGAGGGAGAGGAAAGCCGTGAGAAAGAGGGAGAGACCGTGA
Protein sequenceShow/hide protein sequence
MNPSLDFDRELRQGLIWAYETVSSLTGRVANRISETDIPRILRWSCSHFSSYTTIADPIFDGLDQQNWVKNCLVQCDSDRRKAVDKLAASIDVQVLVRVYDDGGTFDGGW
SSTASDREKEKRSEMKRERKAVRKRERP