; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000157 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000157
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationscaffold6:21166397..21169175
RNA-Seq ExpressionSpg000157
SyntenySpg000157
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033960.1 DUF3511 domain protein [Cucumis melo var. makuwa]8.4e-2673.03Show/hide
Query:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTKSWWKAPEMKRRRRVAKYKLYAVEGKSTTS
        MEG+H   NKGG+SLEV+DVR L ENK YLNQSQ+RT+VDP+FVKR+V KT E SK   KSWWK PEMKRR+RVAKYKLYAVEGK  +S
Subjt:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTKSWWKAPEMKRRRRVAKYKLYAVEGKSTTS

KGN56136.1 hypothetical protein Csa_009524 [Cucumis sativus]7.1e-2572.09Show/hide
Query:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTKS-WWKAPEMKRRRRVAKYKLYAVEGK
        MEG+H  PNKGG+SLEVIDVR L  NK YLNQSQ+RT+VDP+FVK++V KT E SKS  K  WWK PEM+RR+RVAKYKLY VEGK
Subjt:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTKS-WWKAPEMKRRRRVAKYKLYAVEGK

XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]1.0e-2374.7Show/hide
Query:  IDSSSEAVDFEAVFQQTRKCSLKMVDYLRVMKTHADNLGQAGSPVSNRSLISQVLLGLDEEYNPVVAMIQGRVNISWSEMQAE
        + S +E      VFQQTRK SLKM D+LRVMK+HADNLGQAGSPV  RSLISQVLLGLDEEYNPVVA IQG+  ISW EMQAE
Subjt:  IDSSSEAVDFEAVFQQTRKCSLKMVDYLRVMKTHADNLGQAGSPVSNRSLISQVLLGLDEEYNPVVAMIQGRVNISWSEMQAE

XP_022151002.1 uncharacterized protein LOC111019023 [Momordica charantia]1.1e-2268.13Show/hide
Query:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVD--PTFVKRHVNKTQESSKSSTKSWWKAPEMKRRRRVAKYKLYAVEGKSTTS
        MEGIHRRP KGG+SLE+IDVRNL ENK  L+QS+ R  VD  P+  ++ + K  ESSKSS KSWWK PEMKRRRRVAKYKLY VEGK   S
Subjt:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVD--PTFVKRHVNKTQESSKSSTKSWWKAPEMKRRRRVAKYKLYAVEGKSTTS

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]1.8e-2060.92Show/hide
Query:  IDSSSEAVDFEAVFQQTRKCSLKMVDYLRVMKTHADNLGQAGSPVSNRSLISQVLLGLDEEYNPVVAMIQGRVNISWSEMQAELLVF
        + S +E    + VFQQT K SL+M++YL++MK+HADNL  AGS VS R L+SQVL GLDEEYNP+V  +QG+VN+SWSEM AELL +
Subjt:  IDSSSEAVDFEAVFQQTRKCSLKMVDYLRVMKTHADNLGQAGSPVSNRSLISQVLLGLDEEYNPVVAMIQGRVNISWSEMQAELLVF

TrEMBL top hitse value%identityAlignment
A0A0A0L7N5 Uncharacterized protein3.4e-2572.09Show/hide
Query:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTKS-WWKAPEMKRRRRVAKYKLYAVEGK
        MEG+H  PNKGG+SLEVIDVR L  NK YLNQSQ+RT+VDP+FVK++V KT E SKS  K  WWK PEM+RR+RVAKYKLY VEGK
Subjt:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTKS-WWKAPEMKRRRRVAKYKLYAVEGK

A0A5D3BTT8 DUF3511 domain protein4.1e-2673.03Show/hide
Query:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTKSWWKAPEMKRRRRVAKYKLYAVEGKSTTS
        MEG+H   NKGG+SLEV+DVR L ENK YLNQSQ+RT+VDP+FVKR+V KT E SK   KSWWK PEMKRR+RVAKYKLYAVEGK  +S
Subjt:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTKSWWKAPEMKRRRRVAKYKLYAVEGKSTTS

A0A6J1D5J0 uncharacterized protein LOC1110175015.0e-2474.7Show/hide
Query:  IDSSSEAVDFEAVFQQTRKCSLKMVDYLRVMKTHADNLGQAGSPVSNRSLISQVLLGLDEEYNPVVAMIQGRVNISWSEMQAE
        + S +E      VFQQTRK SLKM D+LRVMK+HADNLGQAGSPV  RSLISQVLLGLDEEYNPVVA IQG+  ISW EMQAE
Subjt:  IDSSSEAVDFEAVFQQTRKCSLKMVDYLRVMKTHADNLGQAGSPVSNRSLISQVLLGLDEEYNPVVAMIQGRVNISWSEMQAE

A0A6J1DCB3 uncharacterized protein LOC1110190235.5e-2368.13Show/hide
Query:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVD--PTFVKRHVNKTQESSKSSTKSWWKAPEMKRRRRVAKYKLYAVEGKSTTS
        MEGIHRRP KGG+SLE+IDVRNL ENK  L+QS+ R  VD  P+  ++ + K  ESSKSS KSWWK PEMKRRRRVAKYKLY VEGK   S
Subjt:  MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVD--PTFVKRHVNKTQESSKSSTKSWWKAPEMKRRRRVAKYKLYAVEGKSTTS

A0A6J1DCW4 uncharacterized protein LOC1110195988.8e-2160.92Show/hide
Query:  IDSSSEAVDFEAVFQQTRKCSLKMVDYLRVMKTHADNLGQAGSPVSNRSLISQVLLGLDEEYNPVVAMIQGRVNISWSEMQAELLVF
        + S +E    + VFQQT K SL+M++YL++MK+HADNL  AGS VS R L+SQVL GLDEEYNP+V  +QG+VN+SWSEM AELL +
Subjt:  IDSSSEAVDFEAVFQQTRKCSLKMVDYLRVMKTHADNLGQAGSPVSNRSLISQVLLGLDEEYNPVVAMIQGRVNISWSEMQAELLVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05725.1 Protein of unknown function (DUF3511)3.9e-0560.53Show/hide
Query:  KTQESSKSST--KSWWKAPEMKRRRRVAKYKLYAVEGK
        + + SS  ST  K WW  PE+KR+RRVAKYKLY+ EGK
Subjt:  KTQESSKSST--KSWWKAPEMKRRRRVAKYKLYAVEGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGATCCATCGCCGTCCAAACAAGGGTGGTCAGAGCCTGGAAGTCATAGACGTGAGAAACCTTTGTGAAAACAAGAAGTACTTGAATCAGTCACAAAAGCGAAC
TATAGTCGACCCAACGTTTGTGAAACGACATGTGAACAAGACACAGGAATCGTCGAAAAGCTCGACGAAGTCATGGTGGAAGGCCCCGGAAATGAAGAGACGACGACGTG
TTGCGAAGTACAAATTGTATGCAGTTGAAGGGAAGAGCACTACATCGGGAGCACCTGATAATTTTTCCTTCTCCGGTTCTCCCTTGTCCAGATGTTATCGCTTGGAGGGT
CATCTGTCCGGTGAGAAGGCCTGTCCACCCAAGTTTCTGTCAACAACAACCGCTGCAGTCACAAATGCTATCGATTCAAGCTCCGAAGCAGTGGATTTCGAGGCTGTTTT
TCAGCAAACTCGAAAGTGTTCTCTTAAAATGGTTGACTATTTGCGTGTCATGAAAACTCATGCAGATAACTTGGGGCAAGCTGGAAGTCCGGTTTCAAATCGATCATTGA
TTTCCCAAGTCTTGTTGGGGTTAGATGAGGAATACAATCCAGTTGTGGCTATGATCCAGGGACGAGTGAACATTTCATGGTCTGAAATGCAGGCAGAGTTGCTGGTTTTT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGATCCATCGCCGTCCAAACAAGGGTGGTCAGAGCCTGGAAGTCATAGACGTGAGAAACCTTTGTGAAAACAAGAAGTACTTGAATCAGTCACAAAAGCGAAC
TATAGTCGACCCAACGTTTGTGAAACGACATGTGAACAAGACACAGGAATCGTCGAAAAGCTCGACGAAGTCATGGTGGAAGGCCCCGGAAATGAAGAGACGACGACGTG
TTGCGAAGTACAAATTGTATGCAGTTGAAGGGAAGAGCACTACATCGGGAGCACCTGATAATTTTTCCTTCTCCGGTTCTCCCTTGTCCAGATGTTATCGCTTGGAGGGT
CATCTGTCCGGTGAGAAGGCCTGTCCACCCAAGTTTCTGTCAACAACAACCGCTGCAGTCACAAATGCTATCGATTCAAGCTCCGAAGCAGTGGATTTCGAGGCTGTTTT
TCAGCAAACTCGAAAGTGTTCTCTTAAAATGGTTGACTATTTGCGTGTCATGAAAACTCATGCAGATAACTTGGGGCAAGCTGGAAGTCCGGTTTCAAATCGATCATTGA
TTTCCCAAGTCTTGTTGGGGTTAGATGAGGAATACAATCCAGTTGTGGCTATGATCCAGGGACGAGTGAACATTTCATGGTCTGAAATGCAGGCAGAGTTGCTGGTTTTT
TAG
Protein sequenceShow/hide protein sequence
MEGIHRRPNKGGQSLEVIDVRNLCENKKYLNQSQKRTIVDPTFVKRHVNKTQESSKSSTKSWWKAPEMKRRRRVAKYKLYAVEGKSTTSGAPDNFSFSGSPLSRCYRLEG
HLSGEKACPPKFLSTTTAAVTNAIDSSSEAVDFEAVFQQTRKCSLKMVDYLRVMKTHADNLGQAGSPVSNRSLISQVLLGLDEEYNPVVAMIQGRVNISWSEMQAELLVF