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Spg000176 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000176
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4228 domain protein
Genome locationscaffold6:22831777..22833193
RNA-Seq ExpressionSpg000176
SyntenySpg000176
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463409.1 PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo]9.4e-2870.71Show/hide
Query:  SNKYLADTMPMSDDDEEASAETVKRRLIDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN
        SNKYLA+TMPMSDD+EE      +R ++++ A+K S   TTELKIRITK+ELEKLL +VD+EELPV ELLS+LID+GDAFESTHRRSW+PSL SIPEVN
Subjt:  SNKYLADTMPMSDDDEEASAETVKRRLIDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN

XP_022151029.1 uncharacterized protein LOC111019048 [Momordica charantia]1.2e-2572.12Show/hide
Query:  SNKYLADTMPMSDDDEEASAETVKRRLI--DNG---ARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSI
        SNKY A+  PMS  DEE + ETVKRRLI  D+G    R +S+  TTE+KIRITKRELEKLL +VDVEELPVTELLSQLID+GDAFESTHRRSWRPSL +I
Subjt:  SNKYLADTMPMSDDDEEASAETVKRRLI--DNG---ARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSI

Query:  PEVN
         E+N
Subjt:  PEVN

XP_022985276.1 uncharacterized protein LOC111483315 [Cucurbita maxima]2.6e-2569.61Show/hide
Query:  SNKYLADTMPMSDDDEEASAETVKRRL-IDNGARKTSMG----TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIP
        SNKYLA+TMPMS  +EE   ET+KR+L  D+GA ++S G    TTE+KIR+TKRELEKLLS+V+VEELPVTELL QLI++GD  ESTHRRSWRPSL SIP
Subjt:  SNKYLADTMPMSDDDEEASAETVKRRL-IDNGARKTSMG----TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIP

Query:  EV
        E+
Subjt:  EV

XP_031739098.1 uncharacterized protein LOC116402843 [Cucumis sativus]2.5e-2874Show/hide
Query:  SNKYLADT-MPMSDDDEEASAETVKRRLIDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN
        SNKYLA+T +PMSDDDEE      +R ++ NGA+K S   TTELKIRITKRELEKLL +VDVEELPVTELLS+LID+GD FESTH+RSWRPSL SIPEVN
Subjt:  SNKYLADT-MPMSDDDEEASAETVKRRLIDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN

XP_038904231.1 uncharacterized protein LOC120090574 [Benincasa hispida]1.7e-3283Show/hide
Query:  SNKYLADTMPMSDDDEEASAETVKRRL-IDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN
        SNKYLA+TMPMSD+DEEA  ETV+RRL + +GARK S   TTELKIRITKRELEKLLS+VDVEELPVTELLSQLID+GDAFESTH+RSWRPSL SIPEVN
Subjt:  SNKYLADTMPMSDDDEEASAETVKRRL-IDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN

TrEMBL top hitse value%identityAlignment
A0A0A0L2D8 Uncharacterized protein1.2e-2874Show/hide
Query:  SNKYLADT-MPMSDDDEEASAETVKRRLIDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN
        SNKYLA+T +PMSDDDEE      +R ++ NGA+K S   TTELKIRITKRELEKLL +VDVEELPVTELLS+LID+GD FESTH+RSWRPSL SIPEVN
Subjt:  SNKYLADT-MPMSDDDEEASAETVKRRLIDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN

A0A1S3CJ77 uncharacterized protein LOC1035015804.6e-2870.71Show/hide
Query:  SNKYLADTMPMSDDDEEASAETVKRRLIDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN
        SNKYLA+TMPMSDD+EE      +R ++++ A+K S   TTELKIRITK+ELEKLL +VD+EELPV ELLS+LID+GDAFESTHRRSW+PSL SIPEVN
Subjt:  SNKYLADTMPMSDDDEEASAETVKRRLIDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN

A0A5D3BTQ9 DUF4228 domain protein4.6e-2870.71Show/hide
Query:  SNKYLADTMPMSDDDEEASAETVKRRLIDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN
        SNKYLA+TMPMSDD+EE      +R ++++ A+K S   TTELKIRITK+ELEKLL +VD+EELPV ELLS+LID+GDAFESTHRRSW+PSL SIPEVN
Subjt:  SNKYLADTMPMSDDDEEASAETVKRRLIDNGARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN

A0A6J1DBT0 uncharacterized protein LOC1110190485.6e-2672.12Show/hide
Query:  SNKYLADTMPMSDDDEEASAETVKRRLI--DNG---ARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSI
        SNKY A+  PMS  DEE + ETVKRRLI  D+G    R +S+  TTE+KIRITKRELEKLL +VDVEELPVTELLSQLID+GDAFESTHRRSWRPSL +I
Subjt:  SNKYLADTMPMSDDDEEASAETVKRRLI--DNG---ARKTSMG-TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSI

Query:  PEVN
         E+N
Subjt:  PEVN

A0A6J1J7P7 uncharacterized protein LOC1114833151.2e-2569.61Show/hide
Query:  SNKYLADTMPMSDDDEEASAETVKRRL-IDNGARKTSMG----TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIP
        SNKYLA+TMPMS  +EE   ET+KR+L  D+GA ++S G    TTE+KIR+TKRELEKLLS+V+VEELPVTELL QLI++GD  ESTHRRSWRPSL SIP
Subjt:  SNKYLADTMPMSDDDEEASAETVKRRL-IDNGARKTSMG----TTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIP

Query:  EV
        E+
Subjt:  EV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G10120.1 unknown protein1.2e-0440Show/hide
Query:  DNGARKTSMGTTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN
        DN   KT+ G   +K+ ++K+ELEKLL    V E+    L  Q   L D  +  H+  WRP L SIPE +
Subjt:  DNGARKTSMGTTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN

AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.6.3e-0634.44Show/hide
Query:  DDDEEASAETVK--RRLIDNGARKTSMGTTELKIRITKRELEKLLSQVDVEELPVTE--LLSQLIDLGDAFESTHRRSWRPSLHSIPEVN
        ++D   S++T +  + +I     K+S+ + E+KIR+TK++L  LLS+V+V +L   +      +++     E+  +R WRP L SIPEVN
Subjt:  DDDEEASAETVK--RRLIDNGARKTSMGTTELKIRITKRELEKLLSQVDVEELPVTE--LLSQLIDLGDAFESTHRRSWRPSLHSIPEVN

AT4G21920.1 unknown protein2.2e-0635.11Show/hide
Query:  SDDDEEASAETVKRRLIDNGARKTSMGTTELKIRITKRELEKLLSQVDVEELPVTELLSQLI-DLGDAF------ESTHRRSWRPSLHSIPEVN
        +DD E+   ET     + + +  +S    E+KIRITK+ELE L+  + ++ L   E+LS+LI + GD         + H + W+P L SIPE++
Subjt:  SDDDEEASAETVKRRLIDNGARKTSMGTTELKIRITKRELEKLLSQVDVEELPVTELLSQLI-DLGDAF------ESTHRRSWRPSLHSIPEVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATGAAGCGAACCCCGAAGGAGGATGCCCCGGTTCCACCTAGTTCAACCCAAATCGTCTCCGAAAGCCTAGAAACCCTAAGGCAGGAAAATGTATTTAAACTCTT
CTCGTCACTGAAGAAGGGATCCCGAAACTATTTCTTTGAACTTTACTTCTCTTGCTCTCATGCTCTCCTCCTTCAGCTTTCTGACTTAAGCATCGGAGGTGGTGTGACAA
GTACCACACTGGTATGCAGCAACAAATATTTGGCAGATACAATGCCGATGAGCGACGACGACGAGGAGGCGTCGGCGGAGACGGTGAAGAGGAGGCTGATCGACAACGGA
GCTCGGAAAACTTCGATGGGAACGACGGAGTTGAAGATCAGAATCACGAAGAGAGAGCTGGAGAAGTTATTGAGCCAAGTGGATGTGGAGGAGCTGCCGGTGACGGAGCT
GTTATCGCAGTTAATCGACCTTGGCGACGCATTTGAGAGTACTCACCGGCGATCATGGCGGCCTTCTTTGCACAGCATTCCTGAGGTCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCATGAAGCGAACCCCGAAGGAGGATGCCCCGGTTCCACCTAGTTCAACCCAAATCGTCTCCGAAAGCCTAGAAACCCTAAGGCAGGAAAATGTATTTAAACTCTT
CTCGTCACTGAAGAAGGGATCCCGAAACTATTTCTTTGAACTTTACTTCTCTTGCTCTCATGCTCTCCTCCTTCAGCTTTCTGACTTAAGCATCGGAGGTGGTGTGACAA
GTACCACACTGGTATGCAGCAACAAATATTTGGCAGATACAATGCCGATGAGCGACGACGACGAGGAGGCGTCGGCGGAGACGGTGAAGAGGAGGCTGATCGACAACGGA
GCTCGGAAAACTTCGATGGGAACGACGGAGTTGAAGATCAGAATCACGAAGAGAGAGCTGGAGAAGTTATTGAGCCAAGTGGATGTGGAGGAGCTGCCGGTGACGGAGCT
GTTATCGCAGTTAATCGACCTTGGCGACGCATTTGAGAGTACTCACCGGCGATCATGGCGGCCTTCTTTGCACAGCATTCCTGAGGTCAATTGA
Protein sequenceShow/hide protein sequence
MIMKRTPKEDAPVPPSSTQIVSESLETLRQENVFKLFSSLKKGSRNYFFELYFSCSHALLLQLSDLSIGGGVTSTTLVCSNKYLADTMPMSDDDEEASAETVKRRLIDNG
ARKTSMGTTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN