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Spg000197 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000197
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionL10-interacting MYB domain-containing protein isoform X2
Genome locationscaffold6:23424469..23429845
RNA-Seq ExpressionSpg000197
SyntenySpg000197
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO82032.1 hypothetical protein COLO4_23291 [Corchorus olitorius]5.6e-1772.73Show/hide
Query:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQY
        KK DG S+SISI  VI AVQALPDMDEDL+LDACDFL+ E  A+ F ALDVK R+KWL+RKLRPQ+
Subjt:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQY

XP_019197395.1 PREDICTED: L10-interacting MYB domain-containing protein [Ipomoea nil]1.6e-1670.77Show/hide
Query:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ
        +K+D  S+S+SI  VIKA+QALPDMDEDLVLDACDFL+ E  A+ F ALD+K R+KWLIRKLRPQ
Subjt:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ

XP_022154442.1 L10-interacting MYB domain-containing protein [Momordica charantia]3.7e-1673.85Show/hide
Query:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ
        KK D  S SI I  VI+AVQALPDMDEDLVLDACD L+ EN A+ F ALDVK RRKWLIRKL+PQ
Subjt:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ

XP_031100307.1 L10-interacting MYB domain-containing protein [Ipomoea triloba]2.8e-1669.23Show/hide
Query:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ
        +K+D +S+S+SI  V+KA+QALPDMDEDLVLDACDFL+ E  A+ F ALD K R+KWLIRKLRPQ
Subjt:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ

XP_034690818.1 L10-interacting MYB domain-containing protein [Vitis riparia]2.1e-1675Show/hide
Query:  KQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ
        K D TS SISI +VI+AVQALPDMDE+LVLDACDFL+ E  A+ F ALDVK R+KWLIRKLRPQ
Subjt:  KQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ

TrEMBL top hitse value%identityAlignment
A0A1R3H0V8 Uncharacterized protein1.8e-1669.7Show/hide
Query:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQY
        KK DG S++ISI  VI AVQALP+MDEDL+LDACDFL+ E  A+ F ALDVK R+KWL+RKLRPQ+
Subjt:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQY

A0A1R3IHH4 Uncharacterized protein2.7e-1772.73Show/hide
Query:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQY
        KK DG S+SISI  VI AVQALPDMDEDL+LDACDFL+ E  A+ F ALDVK R+KWL+RKLRPQ+
Subjt:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQY

A0A5B7B8U3 Uncharacterized protein7.9e-1773.85Show/hide
Query:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ
        KK D TS+SISI  VI+A+QALPDMDEDLVLDACD L+ E  A+ F ALDVK R+KWLIRKLRPQ
Subjt:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ

A0A6J1DLP6 L10-interacting MYB domain-containing protein1.8e-1673.85Show/hide
Query:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ
        KK D  S SI I  VI+AVQALPDMDEDLVLDACD L+ EN A+ F ALDVK RRKWLIRKL+PQ
Subjt:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ

A0A6P5ZZM5 L10-interacting MYB domain-containing protein isoform X21.8e-1670.77Show/hide
Query:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ
        KK DG S+S+SI  VI AVQALPD+DEDL+LDACDFL+ E  A+ F ALDVK R+KWL+RKLRPQ
Subjt:  KKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein2.8e-1464.15Show/hide
Query:  IGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRP
        IG  + A+QALPDMD++L+LDACD L+ E  A+ F ALDV  RRKWL+RKLRP
Subjt:  IGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRP

AT2G24960.2 unknown protein2.8e-1464.15Show/hide
Query:  IGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRP
        IG  + A+QALPDMD++L+LDACD L+ E  A+ F ALDV  RRKWL+RKLRP
Subjt:  IGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRP

AT4G02210.1 unknown protein1.9e-1553.73Show/hide
Query:  PNKKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ
        P K +   + ++SI   ++A+QALPDMD++L+LDACD L+ +  A+ F ALDVK R+KWL+RKLRPQ
Subjt:  PNKKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ

AT4G02210.2 unknown protein1.9e-1553.73Show/hide
Query:  PNKKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ
        P K +   + ++SI   ++A+QALPDMD++L+LDACD L+ +  A+ F ALDVK R+KWL+RKLRPQ
Subjt:  PNKKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACAGATGTTCCTCAGCCAAACAAGAAGCAGGATGGTACCTCGGACTCCATTTCCATTGGAGCAGTGATTAAAGCTGTCCAAGCATTACCAGACATGGATGAAGA
CCTTGTATTAGACGCCTGTGATTTCCTTCAAAAGGAAAATAACGCCGAAATATTTACTGCATTGGATGTCAAATTTCGAAGAAAATGGTTGATAAGAAAACTTCGTCCAC
AGTACAGCGCTATGTGTCACAATCGTAACTCTTCATCCGTGCGGTGTCATGATCTTCGCCCGATCGTGGCCAACCTAGAGGCTAACTCTAACCCATACATTCTTTTCACC
AGTCTTTTTGCTTTGTCAGATCTTAGGCGAGGCCAAGTCCCATGGCTCGACTTTGCCTCAAAGTCTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAACAGATGTTCCTCAGCCAAACAAGAAGCAGGATGGTACCTCGGACTCCATTTCCATTGGAGCAGTGATTAAAGCTGTCCAAGCATTACCAGACATGGATGAAGA
CCTTGTATTAGACGCCTGTGATTTCCTTCAAAAGGAAAATAACGCCGAAATATTTACTGCATTGGATGTCAAATTTCGAAGAAAATGGTTGATAAGAAAACTTCGTCCAC
AGTACAGCGCTATGTGTCACAATCGTAACTCTTCATCCGTGCGGTGTCATGATCTTCGCCCGATCGTGGCCAACCTAGAGGCTAACTCTAACCCATACATTCTTTTCACC
AGTCTTTTTGCTTTGTCAGATCTTAGGCGAGGCCAAGTCCCATGGCTCGACTTTGCCTCAAAGTCTTTGTAA
Protein sequenceShow/hide protein sequence
MTTDVPQPNKKQDGTSDSISIGAVIKAVQALPDMDEDLVLDACDFLQKENNAEIFTALDVKFRRKWLIRKLRPQYSAMCHNRNSSSVRCHDLRPIVANLEANSNPYILFT
SLFALSDLRRGQVPWLDFASKSL