; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000236 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000236
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationscaffold8:46379533..46380375
RNA-Seq ExpressionSpg000236
SyntenySpg000236
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035921.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-13686.79Show/hide
Query:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL
        MLIQ  SS    PI +REVWDFNLH+EF LIN L+DRYPFISMDTEFPGVVVRP   PS      RPSDHYLLLKSNVDALNLIQVGLTLSDA GNLPTL
Subjt:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL

Query:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR
        GT K FIWEFNFRDFDVTRD HAPDSIDLLKRQGIDF RNRAHGVDSARF+ELLMSSGLLCN S+SWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+
Subjt:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR

Query:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        AFFGNKVYDVKHMMRFC SLYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

XP_022957732.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]2.6e-13686.79Show/hide
Query:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL
        MLIQ  SS    PI +REVWDFNLH+EF LIN L+DRYPFISMDTEFPGVVVRP   PS      RPSDHYLLLKSNVDALNLIQVGLTLSDA GNLPTL
Subjt:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL

Query:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR
        GT K FIWEFNFRDFDVTRD HAPDSIDLLKRQGIDF RNRAHGVDSARF+ELLMSSGLLCN S+SWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+
Subjt:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR

Query:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        AFFGNKVYDVKHMMRFC SLYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

XP_022995114.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]3.0e-13787.14Show/hide
Query:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL
        MLIQ  SS    PI +REVWDFNLH+EF LINHL+DRYPFISMDTEFPGVVVRP   PS      RPSDHYLLLKSNVDALNLIQVGLTLSDA GNLPTL
Subjt:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL

Query:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR
        GT K FIWEFNFRDFDVTRD HAPDSIDLLKRQGIDF RNRAHGVDSARF+ELLMSSGLLCN S+SWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+
Subjt:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR

Query:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        AFFGNKVYDVKHMMRFC SLYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

XP_023534188.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]2.6e-13686.79Show/hide
Query:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL
        MLIQ  SS    PI +REVWDFNLH+EF LIN L+DRYPFISMDTEFPGVVVRP   PS      RPSDHYLLLKSNVDALNLIQVGLTLSDA GNLPTL
Subjt:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL

Query:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR
        GT K FIWEFNFRDFDVTRD HAPDSIDLLKRQGIDF RNRAHGVDSARF+ELLMSSGLLCN S+SWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+
Subjt:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR

Query:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        AFFGNKVYDVKHMMRFC SLYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

XP_038901771.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]6.1e-13086.14Show/hide
Query:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR
        I+IR+VWDFNL YEFNLINHL  R+PFISMDTEFPGVV+RP L   R    LRPSDHYLLLKSNVDALNLIQVGLTLSDA GNLPTLGT   FIWEFNFR
Subjt:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR

Query:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM
        DFDV RD HAPDSI+LLKRQGIDF RNR HGV S+RFAELLMSSGLLCNDS++WVTFHSAYDFGYLVKILTR  LPARLHDFLKILR  FGNKVYDVKHM
Subjt:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM

Query:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        MRFC  LYGGLDRVAKTLAVDRAVGK HQAGSDSLLTW AFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

TrEMBL top hitse value%identityAlignment
A0A540MJ72 Poly(A)-specific ribonuclease5.2e-12778.85Show/hide
Query:  QEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSR--RPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLG
        Q+P++P   PI IREVW  NL  EF LI ++ID YPFISMDTEFPGVV RPP+DP+      TLRPSDHY +LKSNVDAL+LIQVGLTLSD+ GNLP LG
Subjt:  QEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSR--RPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLG

Query:  TAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRA
        +   FIWEFNF DFDV RDPHAPDSI+LL+RQGIDF RNR+HGVDS+RFAEL+MSSGL+CNDS+SWVTFHSAYDFGYLVKILTRR+LP+ L++FLKILR 
Subjt:  TAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRA

Query:  FFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        FFGN+VYDVKHMMRFC SLYGGLDRVA+TL VDRAVGKCHQAGSDSLLTWHAFQKMRDVYFV  GPE+HAGVLYGLEV+
Subjt:  FFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

A0A540MJ75 Poly(A)-specific ribonuclease7.5e-12678.42Show/hide
Query:  QEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSR--RPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLG
        Q+P++P   PI +REVW  NL  EF LI ++ID YPFISMDTEFPGVV RPP+DP+      TLRPSDHY +LKSNVDAL+LIQVGLTLSD+ GNLP LG
Subjt:  QEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSR--RPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLG

Query:  TAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRA
        +   FIWEFNF DFDVTRDPHAPDSI+LL+ QGIDF RNR+HGVDS+RFAEL+MSSGL+CNDS+SWVTFHSAYDFGYLVKILTRR+LP+ L++FLKILR 
Subjt:  TAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRA

Query:  FFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEV
        FFGN+VYDVKHMMRFC SLYGGLDRVA+TL VDRAVGKCHQAGSDSLLTWHAFQKMRDVYF+  GPE+HAGVLYGLEV
Subjt:  FFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEV

A0A5N5GIF7 Poly(A)-specific ribonuclease1.2e-12678.49Show/hide
Query:  QEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSR--RPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLG
        Q+P++P   PI IREVW  NL  EF LI ++ID YPFISMDTEFPGVV RPP+DP+      TLRPSDHY +LKSNVDAL+LIQVGLTLSD+ GNLP LG
Subjt:  QEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSR--RPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLG

Query:  TAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRA
        +   FIWEFNF DFDV RDPHAPDSI+LL+RQGIDF RNR+HGVDS+RFAEL+MSSGL+CNDS+SWVTFHSAYDFGYL+KILTRR+LP+ L++FLKILR 
Subjt:  TAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRA

Query:  FFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        FFGN+VYDVKHMMRFC SLYGGLDRVA+TL VDRAVGKCHQAGSDSLLTWHAFQKMRDVYFV  GPE+HAGVLYGLEV+
Subjt:  FFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

A0A6J1GZY2 Poly(A)-specific ribonuclease1.2e-13686.79Show/hide
Query:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL
        MLIQ  SS    PI +REVWDFNLH+EF LIN L+DRYPFISMDTEFPGVVVRP   PS      RPSDHYLLLKSNVDALNLIQVGLTLSDA GNLPTL
Subjt:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL

Query:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR
        GT K FIWEFNFRDFDVTRD HAPDSIDLLKRQGIDF RNRAHGVDSARF+ELLMSSGLLCN S+SWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+
Subjt:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR

Query:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        AFFGNKVYDVKHMMRFC SLYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

A0A6J1K4S7 Poly(A)-specific ribonuclease1.5e-13787.14Show/hide
Query:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL
        MLIQ  SS    PI +REVWDFNLH+EF LINHL+DRYPFISMDTEFPGVVVRP   PS      RPSDHYLLLKSNVDALNLIQVGLTLSDA GNLPTL
Subjt:  MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTL

Query:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR
        GT K FIWEFNFRDFDVTRD HAPDSIDLLKRQGIDF RNRAHGVDSARF+ELLMSSGLLCN S+SWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+
Subjt:  GTAKTFIWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILR

Query:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        AFFGNKVYDVKHMMRFC SLYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  AFFGNKVYDVKHMMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 116.6e-11172.59Show/hide
Query:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKT--FIWEFN
        I IR+VW +NL  EF+LI  +++ YPFISMDTEFPGV+ +  LD  RR     P+  Y LLKSNVDAL+LIQVGLTLSDA GNLP LG  K   +IWEFN
Subjt:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKT--FIWEFN

Query:  FRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVK
        FRDFDV RDPHAPDSI+LL+R GIDF RNR  GV+S RFAEL+MSSGL+CN+S+SWVTFHSAYDFGYLVKILTRR LP  L +FL +LRAFFG++VYDVK
Subjt:  FRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVK

Query:  HMMRFCHS-LYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        H+MRFC   LYGGLDRVA++L V+RAVGKCHQAGSDSLLTW AFQ+MRD+YFV+DG EKHAGVLYGLEV+
Subjt:  HMMRFCHS-LYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

Q9LEU4 Probable CCR4-associated factor 1 homolog 105.6e-7854.51Show/hide
Query:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR
        I IREVWD+NL  EF LI  ++D++ +I+MDTEFPGVV++P               +Y  LK NVD L LIQVGLT SD +GNLPT GT K  IW+FNFR
Subjt:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR

Query:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM
        +F++  D +A +SI+LL++ GIDF +N   G+D  RF EL+MSSG++ ND+ISWVTFH  YDFGYLVK+LT + LP +  DF K+L  +F   VYD+KH+
Subjt:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM

Query:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEV
        M FC+ L+GGL+R+A+ + V+R VG CHQAGSDSLLT  +F+K+++ YF     EK+ GVLYGL V
Subjt:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 91.5e-10768.73Show/hide
Query:  PSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLG--TAKTF
        P  + +  REVW  NL  EF LI+ +ID YPFISMDTEFPGV+ +  L          P D Y LLK+NVDAL+LIQVGLTLSD +GNLP LG    + F
Subjt:  PSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLG--TAKTF

Query:  IWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNK
        IWEFNFRDFDV RD HAPDSI+LL+RQGIDF RN   GV+S RFAEL+MSSGL+CN+ +SWVTFHSAYDFGYL+KILTRR LP  L +F +++R  FG +
Subjt:  IWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNK

Query:  VYDVKHMMRFC-HSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        VYDVKHMM+FC   L+GGLDRVA+TL V+RAVGKCHQAGSDSLLTWHAFQ+MRD+YFV+DGPEKHAGVLYGLEV+
Subjt:  VYDVKHMMRFC-HSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

Q9SAI2 Probable CCR4-associated factor 1 homolog 63.3e-7854.68Show/hide
Query:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR
        I+IREVW+ NL  E +LI  ++D +P+++MDTEFPG+VVRP               HY  LK+NV+ L +IQ+GLT S+  GNLPT GT K  IW+FNFR
Subjt:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR

Query:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM
        +FD+  D  A DSI+LLK+ GID A+N   G+DS RFAELLMSSG++ N+++ WVTFHS YDFGYL+K+LT +NLP    DF K++  +F   VYD+KH+
Subjt:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM

Query:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGLEV
        M+FC+SL+GGL+++A+ L V+R VG CHQAGSDSLLT   F+K+++ +FV  GP  K++GVLYGL V
Subjt:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 72.4e-7652.81Show/hide
Query:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTF-IWEFNF
        I+IREVW+ NL  E  LI  ++D +PF++MDTEFPG+V RP               HY  LK+NV+ L +IQ+GLT SD  GNLPT GT   + IW+FNF
Subjt:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTF-IWEFNF

Query:  RDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKH
        R+FD+  D +A DSI+LL++ GIDF +N   G+DS RFAELLMSSG++ N+++ WVTFHS YDFGYL+K+LT +NLP     F +++  +F  +VYD+KH
Subjt:  RDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKH

Query:  MMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEV
        +M+FC+SL+GGL+++A+ L V+R VG CHQAGSDSLLT   F+K+++ +F+    EK++GVLYGL V
Subjt:  MMRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-7954.68Show/hide
Query:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR
        I+IREVW+ NL  E +LI  ++D +P+++MDTEFPG+VVRP               HY  LK+NV+ L +IQ+GLT S+  GNLPT GT K  IW+FNFR
Subjt:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR

Query:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM
        +FD+  D  A DSI+LLK+ GID A+N   G+DS RFAELLMSSG++ N+++ WVTFHS YDFGYL+K+LT +NLP    DF K++  +F   VYD+KH+
Subjt:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM

Query:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGLEV
        M+FC+SL+GGL+++A+ L V+R VG CHQAGSDSLLT   F+K+++ +FV  GP  K++GVLYGL V
Subjt:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-7954.68Show/hide
Query:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR
        I+IREVW+ NL  E +LI  ++D +P+++MDTEFPG+VVRP               HY  LK+NV+ L +IQ+GLT S+  GNLPT GT K  IW+FNFR
Subjt:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR

Query:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM
        +FD+  D  A DSI+LLK+ GID A+N   G+DS RFAELLMSSG++ N+++ WVTFHS YDFGYL+K+LT +NLP    DF K++  +F   VYD+KH+
Subjt:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM

Query:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGLEV
        M+FC+SL+GGL+++A+ L V+R VG CHQAGSDSLLT   F+K+++ +FV  GP  K++GVLYGL V
Subjt:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGLEV

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-7954.68Show/hide
Query:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR
        I+IREVW+ NL  E +LI  ++D +P+++MDTEFPG+VVRP               HY  LK+NV+ L +IQ+GLT S+  GNLPT GT K  IW+FNFR
Subjt:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEFNFR

Query:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM
        +FD+  D  A DSI+LLK+ GID A+N   G+DS RFAELLMSSG++ N+++ WVTFHS YDFGYL+K+LT +NLP    DF K++  +F   VYD+KH+
Subjt:  DFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHM

Query:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGLEV
        M+FC+SL+GGL+++A+ L V+R VG CHQAGSDSLLT   F+K+++ +FV  GP  K++GVLYGL V
Subjt:  MRFCHSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGP-EKHAGVLYGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-10868.73Show/hide
Query:  PSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLG--TAKTF
        P  + +  REVW  NL  EF LI+ +ID YPFISMDTEFPGV+ +  L          P D Y LLK+NVDAL+LIQVGLTLSD +GNLP LG    + F
Subjt:  PSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLG--TAKTF

Query:  IWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNK
        IWEFNFRDFDV RD HAPDSI+LL+RQGIDF RN   GV+S RFAEL+MSSGL+CN+ +SWVTFHSAYDFGYL+KILTRR LP  L +F +++R  FG +
Subjt:  IWEFNFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNK

Query:  VYDVKHMMRFC-HSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        VYDVKHMM+FC   L+GGLDRVA+TL V+RAVGKCHQAGSDSLLTWHAFQ+MRD+YFV+DGPEKHAGVLYGLEV+
Subjt:  VYDVKHMMRFC-HSLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.7e-11272.59Show/hide
Query:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKT--FIWEFN
        I IR+VW +NL  EF+LI  +++ YPFISMDTEFPGV+ +  LD  RR     P+  Y LLKSNVDAL+LIQVGLTLSDA GNLP LG  K   +IWEFN
Subjt:  IEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKT--FIWEFN

Query:  FRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVK
        FRDFDV RDPHAPDSI+LL+R GIDF RNR  GV+S RFAEL+MSSGL+CN+S+SWVTFHSAYDFGYLVKILTRR LP  L +FL +LRAFFG++VYDVK
Subjt:  FRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVK

Query:  HMMRFCHS-LYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY
        H+MRFC   LYGGLDRVA++L V+RAVGKCHQAGSDSLLTW AFQ+MRD+YFV+DG EKHAGVLYGLEV+
Subjt:  HMMRFCHS-LYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATCCAAGAACCCTCAAGCCCCAGCCCCATCCCCATCGAGATCCGCGAAGTCTGGGACTTCAATCTCCACTACGAATTCAATCTCATCAATCACCTCATCGATCG
ATACCCTTTCATTTCCATGGACACTGAATTTCCCGGCGTCGTCGTCCGCCCTCCTCTCGACCCATCTCGCCGCCCTCTCACTCTCCGCCCCTCCGATCACTACCTTCTCC
TCAAGTCCAACGTCGACGCCCTCAATCTAATCCAGGTCGGCCTCACCCTCTCCGACGCCCACGGCAACCTCCCCACTCTCGGCACCGCCAAGACCTTCATTTGGGAGTTC
AATTTCAGGGACTTCGACGTCACCCGTGACCCCCACGCGCCCGACTCCATCGACCTCCTCAAACGCCAGGGCATCGACTTCGCTCGCAACAGAGCCCACGGGGTTGACTC
CGCCCGCTTCGCCGAGCTCCTCATGTCCTCCGGCCTTCTCTGTAACGACTCCATCAGTTGGGTCACCTTCCACAGCGCCTACGACTTCGGCTACTTGGTCAAGATCCTCA
CTCGCCGGAACCTCCCCGCCCGCCTCCACGACTTCCTCAAAATCCTCAGGGCCTTCTTCGGGAACAAGGTCTATGACGTCAAGCACATGATGCGCTTCTGTCACAGCCTC
TACGGCGGCTTGGACCGGGTCGCCAAGACCCTTGCCGTCGACCGGGCGGTCGGCAAGTGCCACCAGGCCGGTTCTGATAGCCTGCTCACGTGGCATGCCTTTCAGAAGAT
GAGGGATGTGTATTTTGTCAAGGATGGCCCGGAGAAGCACGCCGGCGTCTTGTATGGACTAGAAGTGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATCCAAGAACCCTCAAGCCCCAGCCCCATCCCCATCGAGATCCGCGAAGTCTGGGACTTCAATCTCCACTACGAATTCAATCTCATCAATCACCTCATCGATCG
ATACCCTTTCATTTCCATGGACACTGAATTTCCCGGCGTCGTCGTCCGCCCTCCTCTCGACCCATCTCGCCGCCCTCTCACTCTCCGCCCCTCCGATCACTACCTTCTCC
TCAAGTCCAACGTCGACGCCCTCAATCTAATCCAGGTCGGCCTCACCCTCTCCGACGCCCACGGCAACCTCCCCACTCTCGGCACCGCCAAGACCTTCATTTGGGAGTTC
AATTTCAGGGACTTCGACGTCACCCGTGACCCCCACGCGCCCGACTCCATCGACCTCCTCAAACGCCAGGGCATCGACTTCGCTCGCAACAGAGCCCACGGGGTTGACTC
CGCCCGCTTCGCCGAGCTCCTCATGTCCTCCGGCCTTCTCTGTAACGACTCCATCAGTTGGGTCACCTTCCACAGCGCCTACGACTTCGGCTACTTGGTCAAGATCCTCA
CTCGCCGGAACCTCCCCGCCCGCCTCCACGACTTCCTCAAAATCCTCAGGGCCTTCTTCGGGAACAAGGTCTATGACGTCAAGCACATGATGCGCTTCTGTCACAGCCTC
TACGGCGGCTTGGACCGGGTCGCCAAGACCCTTGCCGTCGACCGGGCGGTCGGCAAGTGCCACCAGGCCGGTTCTGATAGCCTGCTCACGTGGCATGCCTTTCAGAAGAT
GAGGGATGTGTATTTTGTCAAGGATGGCCCGGAGAAGCACGCCGGCGTCTTGTATGGACTAGAAGTGTATTAA
Protein sequenceShow/hide protein sequence
MLIQEPSSPSPIPIEIREVWDFNLHYEFNLINHLIDRYPFISMDTEFPGVVVRPPLDPSRRPLTLRPSDHYLLLKSNVDALNLIQVGLTLSDAHGNLPTLGTAKTFIWEF
NFRDFDVTRDPHAPDSIDLLKRQGIDFARNRAHGVDSARFAELLMSSGLLCNDSISWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRAFFGNKVYDVKHMMRFCHSL
YGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY