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Spg000243 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000243
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationscaffold8:45686285..45686953
RNA-Seq ExpressionSpg000243
SyntenySpg000243
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037301.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa]3.8e-7469.78Show/hide
Query:  MSTPP---PSNVSPE------TLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFA
        MSTP    PSN SPE      TLT   N   Q+HFTDEDE++LL  YLQI+RS  P KNS PTLDSPA  R++ A+G KFSHS IADKLHRLKL YHKFA
Subjt:  MSTPP---PSNVSPE------TLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFA

Query:  RTKSFIKTPHHRRVLEIGRSIWGKSPTP-RIKTQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNE
        RTKSFIKTPH R++L++GRSIWGKSPTP   K QV+  SR++SRRIK+RS  R+EG    +DLKNFPVLV+EFS+QFPGNGVWREGLR MEE++LK MNE
Subjt:  RTKSFIKTPHHRRVLEIGRSIWGKSPTP-RIKTQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNE

Query:  KWVLLHIEEAELKARRAALLQQQLR
        KWVLLHIE AELKARRAALL+QQL+
Subjt:  KWVLLHIEEAELKARRAALLQQQLR

KAG6570827.1 hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia]3.0e-7974.07Show/hide
Query:  MSTP---PPSNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFI
        MSTP   PPSN SPETLT         HF++EDEL+LLNCYLQIARSA P  NSQPTLDSPAL RIE AL  KF++SHIADKLHRLKLQYHK ARTKS I
Subjt:  MSTP---PPSNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFI

Query:  KTPHHRRVLEIGRSIWGKSPTPRIKTQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAEL
        KTPHHRR+LEIGRSIWGK PT R K Q + R I RRIK+RS + ++G VDL +FPVL+SEFSR+FPGNGVW+EGLRGMEE+SL+ MNEKWVLLHIEEAEL
Subjt:  KTPHHRRVLEIGRSIWGKSPTPRIKTQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAEL

Query:  KARRAALLQQQLRITE
        KARRAALLQ+QLR+ +
Subjt:  KARRAALLQQQLRITE

KAG6606028.1 hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia]7.1e-8175Show/hide
Query:  MSTP---PP-------SNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKF
        MSTP   PP       S+ +PE LT S  +QLQVHFTDEDELDLLNCYL++A S    KNSQPTLDSPAL RI  ALGHKF HSHIADKLHRLK+QYHKF
Subjt:  MSTP---PP-------SNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKF

Query:  ARTKSFIKTPHHRRVLEIGRSIWGKSPTPRIKTQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLL
        ARTKSFIKTPHH R+LEIGRSIWGK   PR K Q    VISRRI+ RSVA+++G VDLKNFPVLVSEFSRQFPGNGVWREGL+GMEE SLKGMNEKWVLL
Subjt:  ARTKSFIKTPHHRRVLEIGRSIWGKSPTPRIKTQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLL

Query:  HIEEAELKARRAALLQQQLRITET
        HIEEAELKARR AL+Q+Q+  T+T
Subjt:  HIEEAELKARRAALLQQQLRITET

KGN46890.1 hypothetical protein Csa_020607 [Cucumis sativus]1.5e-7871.82Show/hide
Query:  PPSNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRR
        PPS+ SPETLT S N   Q+HF DEDE++LLN YLQI+RS  P KNS PTLDS A  R++ A+G KFSHS IADKLHRLKL YHKFARTKSFIKTPH R+
Subjt:  PPSNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRR

Query:  VLEIGRSIWGKSPTP-RIKTQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELK
        +L++GRSIWGKSPTP   K QV+  SR++SRRIK+RS+ R+EG    VDLKNFPVLV+EFSRQFPGNGVWR+GLR M E++LK MNEKWVLLHIE AELK
Subjt:  VLEIGRSIWGKSPTP-RIKTQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELK

Query:  ARRAALLQQQLRITETSQDV
        ARRAALL++QLR TET++DV
Subjt:  ARRAALLQQQLRITETSQDV

XP_015873627.1 probable transcription factor At1g61730 [Ziziphus jujuba]2.7e-3244.19Show/hide
Query:  STPPPSNVS---PETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIK
        +T  PS+ S   PE  + S   + Q  FT+EDE  LL  +  I +S+ P+      ++SP L RIE +LG +FSH+ I DKL RL+L+YHK ARTKS IK
Subjt:  STPPPSNVS---PETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIK

Query:  TPHHRRVLEIGRSIWGK--SPTPRIKTQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAE
        T H R V +I R IWG+  S +   KT+          KE+   +R G V L+ FPVL  E      GN VW++GL G+EE++LKG+NEKW+LL +EEAE
Subjt:  TPHHRRVLEIGRSIWGK--SPTPRIKTQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAE

Query:  LKARRAALLQQQLRI
        + A RA L ++ + +
Subjt:  LKARRAALLQQQLRI

TrEMBL top hitse value%identityAlignment
A0A0A0KAX7 Uncharacterized protein7.1e-7971.82Show/hide
Query:  PPSNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRR
        PPS+ SPETLT S N   Q+HF DEDE++LLN YLQI+RS  P KNS PTLDS A  R++ A+G KFSHS IADKLHRLKL YHKFARTKSFIKTPH R+
Subjt:  PPSNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRR

Query:  VLEIGRSIWGKSPTP-RIKTQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELK
        +L++GRSIWGKSPTP   K QV+  SR++SRRIK+RS+ R+EG    VDLKNFPVLV+EFSRQFPGNGVWR+GLR M E++LK MNEKWVLLHIE AELK
Subjt:  VLEIGRSIWGKSPTP-RIKTQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELK

Query:  ARRAALLQQQLRITETSQDV
        ARRAALL++QLR TET++DV
Subjt:  ARRAALLQQQLRITETSQDV

A0A5A7T6T1 Serine/arginine repetitive matrix protein 1-like1.8e-7469.78Show/hide
Query:  MSTPP---PSNVSPE------TLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFA
        MSTP    PSN SPE      TLT   N   Q+HFTDEDE++LL  YLQI+RS  P KNS PTLDSPA  R++ A+G KFSHS IADKLHRLKL YHKFA
Subjt:  MSTPP---PSNVSPE------TLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFA

Query:  RTKSFIKTPHHRRVLEIGRSIWGKSPTP-RIKTQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNE
        RTKSFIKTPH R++L++GRSIWGKSPTP   K QV+  SR++SRRIK+RS  R+EG    +DLKNFPVLV+EFS+QFPGNGVWREGLR MEE++LK MNE
Subjt:  RTKSFIKTPHHRRVLEIGRSIWGKSPTP-RIKTQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNE

Query:  KWVLLHIEEAELKARRAALLQQQLR
        KWVLLHIE AELKARRAALL+QQL+
Subjt:  KWVLLHIEEAELKARRAALLQQQLR

A0A6A2Z6N0 Uncharacterized protein1.5e-3140.67Show/hide
Query:  MSTPPPSNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTP
        MSTPPP    P T T   N +    F++ DE+ +L C ++  +S  P      T+ +P + RI   L  KFS S I DKL RL+ +YHK AR KS ++T 
Subjt:  MSTPPPSNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTP

Query:  HHRRVLEIGRSIWGKSPTPRIKTQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKAR
        H RR+ ++ + IWGK   PR           ++  E    + +G  +L NF  LV+EFSR  PGN VW+E + GM E  L+ M+++WV L +EEA+L AR
Subjt:  HHRRVLEIGRSIWGKSPTPRIKTQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKAR

Query:  RAALLQQQL
        +A L+QQQ+
Subjt:  RAALLQQQL

A0A6P3Z773 probable transcription factor At1g617301.3e-3244.19Show/hide
Query:  STPPPSNVS---PETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIK
        +T  PS+ S   PE  + S   + Q  FT+EDE  LL  +  I +S+ P+      ++SP L RIE +LG +FSH+ I DKL RL+L+YHK ARTKS IK
Subjt:  STPPPSNVS---PETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIK

Query:  TPHHRRVLEIGRSIWGK--SPTPRIKTQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAE
        T H R V +I R IWG+  S +   KT+          KE+   +R G V L+ FPVL  E      GN VW++GL G+EE++LKG+NEKW+LL +EEAE
Subjt:  TPHHRRVLEIGRSIWGK--SPTPRIKTQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAE

Query:  LKARRAALLQQQLRI
        + A RA L ++ + +
Subjt:  LKARRAALLQQQLRI

A0A6P5ZW34 probable transcription factor At1g617305.0e-3239.05Show/hide
Query:  MSTPPPSNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTP
        MSTP PS         + N +    F++ DE  +L C ++  +S  P      T+ +P + RI   L ++FS S I DK+ RL+++YHK ARTKS ++T 
Subjt:  MSTPPPSNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTP

Query:  HHRRVLEIGRSIWGKSPTPRIKTQVVSRVISRRIKER-SVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKA
        H RR+ ++ + IWGK  TP            ++ KER    + +G  DL  FP LV+EFSR  P N VW+E ++G+EE  LK M+++WVL+ +EEA+L A
Subjt:  HHRRVLEIGRSIWGKSPTPRIKTQVVSRVISRRIKER-SVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKA

Query:  RRAALLQQQL
        ++A L+Q+Q+
Subjt:  RRAALLQQQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACGCCGCCGCCGTCCAACGTCTCTCCCGAAACCCTAACCCATTCCACCAACGATCAACTTCAAGTCCATTTCACCGACGAAGACGAACTCGATCTCCTCAATTG
CTACCTCCAAATCGCCAGATCCGCAATCCCCGCCAAGAATTCTCAGCCCACTCTCGATTCTCCCGCCTTGGGCCGCATCGAGGCCGCTCTCGGCCACAAATTCAGCCACT
CCCACATCGCCGATAAGCTCCACAGGCTCAAACTCCAGTACCACAAGTTCGCAAGAACCAAGTCCTTCATCAAAACCCCCCACCACCGTCGGGTTCTCGAGATCGGCCGC
AGCATCTGGGGAAAATCCCCCACGCCCAGGATAAAAACGCAGGTAGTTTCACGGGTGATTTCACGCAGAATCAAAGAAAGATCAGTTGCGAGGAGAGAGGGGGCGGTTGA
TCTGAAGAATTTTCCTGTTCTTGTGAGTGAATTTTCTCGGCAGTTCCCGGGAAATGGGGTGTGGAGAGAGGGGCTGAGGGGAATGGAGGAGAGGAGTTTGAAGGGTATGA
ACGAGAAGTGGGTTTTGTTGCATATTGAAGAGGCAGAGCTCAAGGCTAGAAGGGCTGCTTTATTACAGCAGCAACTTAGAATTACAGAGACTTCTCAAGATGTTAAATCA
CATTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACGCCGCCGCCGTCCAACGTCTCTCCCGAAACCCTAACCCATTCCACCAACGATCAACTTCAAGTCCATTTCACCGACGAAGACGAACTCGATCTCCTCAATTG
CTACCTCCAAATCGCCAGATCCGCAATCCCCGCCAAGAATTCTCAGCCCACTCTCGATTCTCCCGCCTTGGGCCGCATCGAGGCCGCTCTCGGCCACAAATTCAGCCACT
CCCACATCGCCGATAAGCTCCACAGGCTCAAACTCCAGTACCACAAGTTCGCAAGAACCAAGTCCTTCATCAAAACCCCCCACCACCGTCGGGTTCTCGAGATCGGCCGC
AGCATCTGGGGAAAATCCCCCACGCCCAGGATAAAAACGCAGGTAGTTTCACGGGTGATTTCACGCAGAATCAAAGAAAGATCAGTTGCGAGGAGAGAGGGGGCGGTTGA
TCTGAAGAATTTTCCTGTTCTTGTGAGTGAATTTTCTCGGCAGTTCCCGGGAAATGGGGTGTGGAGAGAGGGGCTGAGGGGAATGGAGGAGAGGAGTTTGAAGGGTATGA
ACGAGAAGTGGGTTTTGTTGCATATTGAAGAGGCAGAGCTCAAGGCTAGAAGGGCTGCTTTATTACAGCAGCAACTTAGAATTACAGAGACTTCTCAAGATGTTAAATCA
CATTACTAA
Protein sequenceShow/hide protein sequence
MSTPPPSNVSPETLTHSTNDQLQVHFTDEDELDLLNCYLQIARSAIPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRRVLEIGR
SIWGKSPTPRIKTQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKARRAALLQQQLRITETSQDVKS
HY