; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000300 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000300
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold8:39530525..39532682
RNA-Seq ExpressionSpg000300
SyntenySpg000300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MQL77781.1 hypothetical protein [Colocasia esculenta]4.0e-2038.14Show/hide
Query:  GNPQGYLQ-----NQPRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPT
        G   G+LQ      QP T AE +S AQ++ + EE L +          S++++  + DKK+ +D G     D  R +   GR   D    L+ F  YTP 
Subjt:  GNPQGYLQ-----NQPRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPT

Query:  SIPQEQIMMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQ
        ++  EQI+ EIRN   L  P++++S+P  RD+++YC FHRDHGH T  C QLKDEIE LI+ GYL  F  + E   R    T + P K++   Q
Subjt:  SIPQEQIMMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQ

XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.4e-2038.8Show/hide
Query:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN
        P T++E +S AQ+YMSA E   SK             R+S   +  Q  E    +P  SR      R R  Q D  +KFE+YT T++P EQ++MEI+N  
Subjt:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN

Query:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        LL  P ++ ++   R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q          G+    P  EIR
Subjt:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.3e-2338.8Show/hide
Query:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN
        P T++E +S AQ+YMSA E   SK      + P     D ++++     +G R             R R  Q D  +KFE+YTPT++P EQ++MEI++  
Subjt:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN

Query:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E+E LIR GYLKE+  + +A Q          G+    P  EIR
Subjt:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]5.1e-2342.62Show/hide
Query:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN
        P T+AE +S AQKYMSAEE    KK E E KR             Q+ +  G         + D   G   Q D  +KFE+YTPT++P EQ++MEI++  
Subjt:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN

Query:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        LL  P  +K+ P+ R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A      P R++   D   P  EIR
Subjt:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]6.2e-2137.16Show/hide
Query:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN
        P T++E +S AQ+YMSA E   SK      + P     D ++++     +G R             R R  Q D  +KFE+YTPT++P EQ++MEI++  
Subjt:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN

Query:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E LIR GYL+E+  + +A Q          G+ +  P  EIR
Subjt:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128056.7e-2138.8Show/hide
Query:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN
        P T++E +S AQ+YMSA E   SK             R+S   +  Q  E    +P  SR      R R  Q D  +KFE+YT T++P EQ++MEI+N  
Subjt:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN

Query:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        LL  P ++ ++   R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q          G+    P  EIR
Subjt:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A6J1DWY0 uncharacterized protein LOC1110252936.5e-2438.8Show/hide
Query:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN
        P T++E +S AQ+YMSA E   SK      + P     D ++++     +G R             R R  Q D  +KFE+YTPT++P EQ++MEI++  
Subjt:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN

Query:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E+E LIR GYLKE+  + +A Q          G+    P  EIR
Subjt:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A6J1DYL6 uncharacterized protein LOC1110257853.0e-2137.16Show/hide
Query:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN
        P T++E +S AQ+YMSA E   SK      + P     D ++++     +G R             R R  Q D  +KFE+YTPT++P EQ++MEI++  
Subjt:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN

Query:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E LIR GYL+E+  + +A Q          G+ +  P  EIR
Subjt:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A6J1DZ52 uncharacterized protein LOC1110256122.5e-2342.62Show/hide
Query:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN
        P T+AE +S AQKYMSAEE    KK E E KR             Q+ +  G         + D   G   Q D  +KFE+YTPT++P EQ++MEI++  
Subjt:  PRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTN

Query:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        LL  P  +K+ P+ R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A      P R++   D   P  EIR
Subjt:  LLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A7N2N9G0 Reverse transcriptase2.4e-1838.25Show/hide
Query:  QNQPRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRG-RPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEI
        +N P+T +E +  A KYM+AE+ L    L RE K         RK ++Q+ +   +GR     G R +  R RP  G    +F  +TP + P +Q++M+I
Subjt:  QNQPRTYAEFVSWAQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRG-RPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEI

Query:  RNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQ
        ++   L  P KLKS+P+ R + +YC FHRDHGH T +C  LK +IEALIR G L+ F +K  AD   P      P +D   P+
Subjt:  RNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAA
AAACCCTAGGAGCACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGT
TGGTGGCACGTGAAGGTCAGGGGATGGAGAAGAGAATTCAAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGG
CCTCGGATTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTGCTCTTGAAAACAAAGTAAGTGCGATGGATCATAA
TTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGACCCGAGGAAGGGGAAGGAGCCCATGGAGCACATTG
CAGAATCAGAGACGAGGTCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACA
CTTAAGGGGCACGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGA
GGCCAGGGCTGCAGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGGCAATCCCCCCTGGAAGACTGAGCTACTAAACACAC
TAAAAGAGCTTGGAAATCCACAGGGATACCTGCAGAACCAACCTCGAACCTATGCAGAGTTCGTCTCCTGGGCACAGAAGTACATGAGCGCAGAGGAGTTGCTCAAATCA
AAAAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGACAGTAGGAAGGACAAGAAGCAGCAGACCGACGAGGGAGGCCGAGGCCGACCAGACTATAGCCG
AGGCCGACCAGATCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATAATGATGGAGATAA
GGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGTATTGCCTCTTTCATCGAGATCATGGACATTCAACCAGAAAC
TGCATTCAGCTAAAGGACGAGATTGAAGCGTTGATTCGGAACGGATACCTGAAGGAATTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCAAGGCCGACCAGAGATGA
CCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAA
AAACCCTAGGAGCACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGT
TGGTGGCACGTGAAGGTCAGGGGATGGAGAAGAGAATTCAAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGG
CCTCGGATTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTGCTCTTGAAAACAAAGTAAGTGCGATGGATCATAA
TTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGACCCGAGGAAGGGGAAGGAGCCCATGGAGCACATTG
CAGAATCAGAGACGAGGTCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACA
CTTAAGGGGCACGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGA
GGCCAGGGCTGCAGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGGCAATCCCCCCTGGAAGACTGAGCTACTAAACACAC
TAAAAGAGCTTGGAAATCCACAGGGATACCTGCAGAACCAACCTCGAACCTATGCAGAGTTCGTCTCCTGGGCACAGAAGTACATGAGCGCAGAGGAGTTGCTCAAATCA
AAAAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGACAGTAGGAAGGACAAGAAGCAGCAGACCGACGAGGGAGGCCGAGGCCGACCAGACTATAGCCG
AGGCCGACCAGATCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATAATGATGGAGATAA
GGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGTATTGCCTCTTTCATCGAGATCATGGACATTCAACCAGAAAC
TGCATTCAGCTAAAGGACGAGATTGAAGCGTTGATTCGGAACGGATACCTGAAGGAATTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCAAGGCCGACCAGAGATGA
CCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA
Protein sequenceShow/hide protein sequence
MVGPLARAELGHLLSVPNVASRLGFAWFVPKRLRIPKNPRSTSSIGGGVASTTPVCRFSLLQATSSPSSTNLPLVAREGQGMEKRIQDINTENSDGDRHQRRSREEGRDR
PRIESPRPRSPLPSSREKQADLKFAALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHIAESETRSKGKKTSSMTSKVRGLKPTDRTILRSPESST
LKGHDYTVSTPSYGHTKTDLRNLIEEKRRSAKTAESEARAAEAEARAAEAEARLAEAEAKKGNPPWKTELLNTLKELGNPQGYLQNQPRTYAEFVSWAQKYMSAEELLKS
KKLEREHKRPSSSDRDSRKDKKQQTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQIMMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRN
CIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR