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Spg000315 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000315
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionORF43m
Genome locationscaffold8:37090806..37092232
RNA-Seq ExpressionSpg000315
SyntenySpg000315
Gene Ontology termsGO:0006101 - citrate metabolic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0004108 - citrate (Si)-synthase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM97427.1 hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]4.5e-0971.11Show/hide
Query:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
        T   +    R+PSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQ++
Subjt:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
KAF4348549.1 hypothetical protein F8388_000228 [Cannabis sativa]4.5e-0971.11Show/hide
Query:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
        T   +    R+PSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQ++
Subjt:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
KAF4360944.1 hypothetical protein G4B88_015419 [Cannabis sativa]4.5e-0971.11Show/hide
Query:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
        T   +    R+PSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQ++
Subjt:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
KAF4361765.1 hypothetical protein G4B88_012073 [Cannabis sativa]4.5e-0971.11Show/hide
Query:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
        T   +    R+PSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQ++
Subjt:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
TYK06708.1 hypothetical protein E5676_scaffold13G00090 [Cucumis melo var. makuwa]4.5e-0971.11Show/hide
Query:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
        T   +    R+PSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQ++
Subjt:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
TrEMBL top hitse value%identityAlignment
A0A5D3C6C5 Uncharacterized protein2.2e-0971.11Show/hide
Query:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
        T   +    R+PSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQ++
Subjt:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
A0A6B9QF48 ORF43m2.2e-0971.11Show/hide
Query:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
        T   +    R+PSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQ++
Subjt:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
A0A6B9QFK3 ORF43m2.2e-0971.11Show/hide
Query:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
        T   +    R+PSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQ++
Subjt:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
A0A6B9QGL2 ORF43m2.2e-0971.11Show/hide
Query:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
        T   +    R+PSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQ++
Subjt:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
A0A7J6ETR9 Citrate synthase2.2e-0971.11Show/hide
Query:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
        T   +    R+PSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQ++
Subjt:  TSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGCTGCGCAGCATGCTCCGGGAGAGTGGGGAGTGAAAACACCAATGCAGCAGAGAACGACCGCATGAATCGGAATCCACAACGAGAAAGACAGACGACCGAGAA
AGAAAGGCTCCACGTTCTCCAAGTAGTTGATCTTCTCACCCCCAACACGAGTACGTCTATTTTTTCATTTTTTAGGATTCCCTCATCTGGAATCCCTGGGGAAGAGGATC
AAGTTGGCCCTTGCGAACAACTTGATGCACGAGATCCCTTCAACCCTTTGAGCGAAATGCGGCAAAGGCAAGTTGTAAGGAGGGTTCGTTCTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGCTGCGCAGCATGCTCCGGGAGAGTGGGGAGTGAAAACACCAATGCAGCAGAGAACGACCGCATGAATCGGAATCCACAACGAGAAAGACAGACGACCGAGAA
AGAAAGGCTCCACGTTCTCCAAGTAGTTGATCTTCTCACCCCCAACACGAGTACGTCTATTTTTTCATTTTTTAGGATTCCCTCATCTGGAATCCCTGGGGAAGAGGATC
AAGTTGGCCCTTGCGAACAACTTGATGCACGAGATCCCTTCAACCCTTTGAGCGAAATGCGGCAAAGGCAAGTTGTAAGGAGGGTTCGTTCTGGTTAA
Protein sequenceShow/hide protein sequence
MSGCAACSGRVGSENTNAAENDRMNRNPQRERQTTEKERLHVLQVVDLLTPNTSTSIFSFFRIPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQRQVVRRVRSG