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Spg000364 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000364
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSYP124 protein
Genome locationscaffold8:41747020..41750323
RNA-Seq ExpressionSpg000364
SyntenySpg000364
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010698.1 hypothetical protein SDJN02_27494 [Cucurbita argyrosperma subsp. argyrosperma]1.8e-4367.11Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVL----LSSA
        MATLAAAA RQARALTRVSSPQS ATLI RRGLAGAADHHGPPKVNCW DPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDE +      + 
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVL----LSSA

Query:  FIVFALLILKTSGSITVLWIIWILRHGVFETRNRINLWKHHNELSHGHF
        F+ F   +                           NLWKHHNELS G F
Subjt:  FIVFALLILKTSGSITVLWIIWILRHGVFETRNRINLWKHHNELSHGHF
KAG7034933.1 hypothetical protein SDJN02_01726, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4294.68Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLS
        MATLAA AVRQARALTRVSSPQST+TLI RRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLF+GGYKFFT GKGKKDEVLLS
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLS
XP_022140380.1 uncharacterized protein LOC111011068 [Momordica charantia]2.4e-4392.71Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSA
        MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCW+DPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKK+E L+ ++
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSA
XP_023532872.1 uncharacterized protein LOC111794912 [Cucurbita pepo subsp. pepo]1.3e-4196.67Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDE
        MATLAAAAVRQARALTRVSSPQSTATLI RRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLF+GGYKFFT GKGKKDE
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDE
XP_038900519.1 uncharacterized protein LOC120087716 [Benincasa hispida]4.0e-4392.71Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSA
        MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHG PKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDE ++ ++
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSA
TrEMBL top hitse value%identityAlignment
A0A1S3BJS2 uncharacterized protein LOC1034904675.3e-4186.46Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSA
        MATLAAAAVRQARAL RVSSPQSTA LIH+RGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFV+VSLSGWG+L FGGYKFFTRGKG KDE ++ ++
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSA
A0A5A7U364 Uncharacterized protein2.4e-4175Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSAFIVF
        MATLAAAAVRQARAL RVSSPQSTA LIH+RGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFV+VSLSGWGLL FGGYKFFTRGKG KDE+ +S     F
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSAFIVF

Query:  ALLILKTSGSITVLWIIWILRHGV
         L  + T  S+  L+I +I   G+
Subjt:  ALLILKTSGSITVLWIIWILRHGV
A0A6J1CEY6 uncharacterized protein LOC1110110681.1e-4392.71Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSA
        MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCW+DPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKK+E L+ ++
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSA
A0A6J1FYP0 uncharacterized protein LOC1114489073.1e-4189.58Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSA
        MATLAAAA RQARALTRVSSPQS ATLI RRGLAGAADHHGPPKVNCW DPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFT GKGKKDE L+ ++
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSA
A0A6J1I3K1 uncharacterized protein LOC1114695975.3e-4194.44Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDE
        MATLAA AVRQARALTR SSPQSTATLI RRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLF+GGYKFFT GKGKKDE
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20820.1 unknown protein5.7e-1953.01Show/hide
Query:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGK
        A+  R+A +L ++ S +     A++  RR LAGAADHHG  KV+ W+ P +P  WKEEHFV++SLSGWGLLF+ GYK  T GK
Subjt:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGK
AT2G20820.2 unknown protein2.6e-0844.26Show/hide
Query:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFV
        A+  R+A +L ++ S +     A++  RR LAGAADHHG  KV+ W+ P +P  WKEEH++
Subjt:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTTAGCGGCTGCTGCAGTTCGTCAAGCCAGAGCCCTAACTCGAGTCTCCTCTCCTCAGTCAACTGCCACCCTTATTCACAGGCGCGGTCTCGCTGGCGCTGC
CGACCACCATGGACCACCGAAGGTTAACTGTTGGCAAGATCCTATGAGCCCATCCAAATGGAAGGAAGAGCATTTTGTGATTGTCTCTCTATCAGGATGGGGTCTACTCT
TCTTTGGAGGGTACAAGTTCTTTACCAGGGGCAAAGGAAAGAAGGATGAGGTACTTCTGAGTTCTGCATTTATTGTCTTTGCGCTCTTAATACTTAAAACCTCTGGAAGT
ATTACAGTTTTATGGATCATTTGGATCTTAAGACATGGAGTATTTGAAACTCGTAACAGGATAAACTTGTGGAAGCATCATAATGAGCTGAGCCATGGACATTTTCCGAT
TGTTCTGAAGTACTCCTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCTTAGCGGCTGCTGCAGTTCGTCAAGCCAGAGCCCTAACTCGAGTCTCCTCTCCTCAGTCAACTGCCACCCTTATTCACAGGCGCGGTCTCGCTGGCGCTGC
CGACCACCATGGACCACCGAAGGTTAACTGTTGGCAAGATCCTATGAGCCCATCCAAATGGAAGGAAGAGCATTTTGTGATTGTCTCTCTATCAGGATGGGGTCTACTCT
TCTTTGGAGGGTACAAGTTCTTTACCAGGGGCAAAGGAAAGAAGGATGAGGTACTTCTGAGTTCTGCATTTATTGTCTTTGCGCTCTTAATACTTAAAACCTCTGGAAGT
ATTACAGTTTTATGGATCATTTGGATCTTAAGACATGGAGTATTTGAAACTCGTAACAGGATAAACTTGTGGAAGCATCATAATGAGCTGAGCCATGGACATTTTCCGAT
TGTTCTGAAGTACTCCTCGTAA
Protein sequenceShow/hide protein sequence
MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVIVSLSGWGLLFFGGYKFFTRGKGKKDEVLLSSAFIVFALLILKTSGS
ITVLWIIWILRHGVFETRNRINLWKHHNELSHGHFPIVLKYSS