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Spg000379 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000379
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionORF43m
Genome locationscaffold8:46857392..46859850
RNA-Seq ExpressionSpg000379
SyntenySpg000379
Gene Ontology termsGO:0006101 - citrate metabolic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0004108 - citrate (Si)-synthase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3670896.1 hypothetical protein FXO38_06869 [Capsicum annuum]5.8e-1478.57Show/hide
Query:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGK-SIWTIPIVSTP
        GV  S RVPSSEI GEEDQVGPCEQLDALSPFNPLS+MRQK+ K + WT PI+STP
Subjt:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGK-SIWTIPIVSTP
KAG9438444.1 hypothetical protein H6P81_021614 [Aristolochia fimbriata]2.2e-1362.16Show/hide
Query:  MEMVDNTRHLPPCS-----GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSIWTIPIVSTP
        M + D+T     C      GV  S RVPSS I GEEDQVGPCEQLDALSPFNPLS+M QK  ++ WT PIVSTP
Subjt:  MEMVDNTRHLPPCS-----GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSIWTIPIVSTP
KAG9438669.1 hypothetical protein H6P81_021389 [Aristolochia fimbriata]2.9e-1374.14Show/hide
Query:  PCSGVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSIWTIPIVSTP
        P  GV  S RVPSS I GEEDQVGPCEQLDALSPFNPLS+M QK  ++ WT PIVSTP
Subjt:  PCSGVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSIWTIPIVSTP
KAG9438700.1 hypothetical protein H6P81_021359 [Aristolochia fimbriata]2.9e-1374.14Show/hide
Query:  PCSGVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSIWTIPIVSTP
        P  GV  S RVPSS I GEEDQVGPCEQLDALSPFNPLS+M QK  ++ WT PIVSTP
Subjt:  PCSGVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSIWTIPIVSTP
PHT25431.1 hypothetical protein CQW23_34938 [Capsicum baccatum]5.8e-1478.57Show/hide
Query:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGK-SIWTIPIVSTP
        GV  S RVPSSEI GEEDQVGPCEQLDALSPFNPLS+MRQK+ K + WT PI+STP
Subjt:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGK-SIWTIPIVSTP
TrEMBL top hitse value%identityAlignment
A0A200PP77 Uncharacterized protein5.3e-1386.96Show/hide
Query:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSI
        GV  SLRVPSS I GEEDQVGPCEQLDALSPFNPLS+MRQKEGKS+
Subjt:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSI
A0A2G2UXE5 Uncharacterized protein2.8e-1478.57Show/hide
Query:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGK-SIWTIPIVSTP
        GV  S RVPSSEI GEEDQVGPCEQLDALSPFNPLS+MRQK+ K + WT PI+STP
Subjt:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGK-SIWTIPIVSTP
A0A5K1B0R4 Uncharacterized protein1.8e-1380Show/hide
Query:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSIWTIPIVSTP
        GV  S RV SS I GEEDQVGPCEQLDALSPFNPLS+MRQKEG   WT PIVSTP
Subjt:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSIWTIPIVSTP
A0A6B9QF48 ORF43m9.1e-1386.96Show/hide
Query:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSI
        GV  SLRVPSS I GEEDQVGPCEQLDALSPFNPLS+MRQKEGKS+
Subjt:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSI
A0A6B9QFK3 ORF43m9.1e-1386.96Show/hide
Query:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSI
        GV  SLRVPSS I GEEDQVGPCEQLDALSPFNPLS+MRQKEGKS+
Subjt:  GVSDSLRVPSSEILGEEDQVGPCEQLDALSPFNPLSKMRQKEGKSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGTAGTGTGGTCGGAAACAACTGTAAAAAGGAAGTTGGAAGCCAAATTGGGGAAGCATACAAAAGTGTGCTACGAAGCTCGTTATGAAGGTGTAAAGTTGTATAC
TGATGCAACGGTATTTCCTATTAGTGACGGTGCAGGTTATGGTGCTGTTGTTGTTAGCGAAGATGGCAACATTAGAGGAGCAATGGAAATGGTTGACAACACACGACATT
TACCCCCTTGCAGTGGAGTCAGCGACTCTCTTAGGGTTCCCTCATCTGAGATCCTTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAACTTGATGCACTATCTCCTTTC
AACCCTTTGAGCAAAATGCGGCAAAAGGAAGGAAAATCCATATGGACAATACCCATTGTCTCCACCCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCATGTAGTGTGGTCGGAAACAACTGTAAAAAGGAAGTTGGAAGCCAAATTGGGGAAGCATACAAAAGTGTGCTACGAAGCTCGTTATGAAGGTGTAAAGTTGTATAC
TGATGCAACGGTATTTCCTATTAGTGACGGTGCAGGTTATGGTGCTGTTGTTGTTAGCGAAGATGGCAACATTAGAGGAGCAATGGAAATGGTTGACAACACACGACATT
TACCCCCTTGCAGTGGAGTCAGCGACTCTCTTAGGGTTCCCTCATCTGAGATCCTTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAACTTGATGCACTATCTCCTTTC
AACCCTTTGAGCAAAATGCGGCAAAAGGAAGGAAAATCCATATGGACAATACCCATTGTCTCCACCCCATAG
Protein sequenceShow/hide protein sequence
MHVVWSETTVKRKLEAKLGKHTKVCYEARYEGVKLYTDATVFPISDGAGYGAVVVSEDGNIRGAMEMVDNTRHLPPCSGVSDSLRVPSSEILGEEDQVGPCEQLDALSPF
NPLSKMRQKEGKSIWTIPIVSTP