; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000383 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000383
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L18
Genome locationscaffold8:45540298..45545743
RNA-Seq ExpressionSpg000383
SyntenySpg000383
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
InterPro domainsIPR005484 - Ribosomal protein L18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140774.1 uncharacterized protein LOC111011356 [Momordica charantia]3.4e-5792.97Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLFISLKYITANVVDRNNGR+VATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKG KN TKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ
        AIVNSL+N GVKL+LDDNV  ASRP YQ
Subjt:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ

XP_022943852.1 uncharacterized protein LOC111448460 [Cucurbita moschata]1.1e-5893.75Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ
        AIVNSLKNNGVKL+LD+N  DASRPSY+
Subjt:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ

XP_022985582.1 uncharacterized protein LOC111483610 [Cucurbita maxima]5.3e-5892.97Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ
        AIVNSLKNNGVKL+LD+N  DA RPSY+
Subjt:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ

XP_023511782.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo]8.2e-5994.53Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH+DVNKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ
        AIVNSLKNNGVKL+LD+N  DASRPSY+
Subjt:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ

XP_038901007.1 uncharacterized protein LOC120088052 [Benincasa hispida]6.3e-5995.31Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH DVNKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ
        AIVN+LKNNGVKL+LD+NV DASR SYQ
Subjt:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ

TrEMBL top hitse value%identityAlignment
A0A5C7GTN9 Uncharacterized protein1.4e-5691.34Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLFISLKYITANVVDRNNGRIV TASTVEHSIK SLECGRSCNAKAAA+VGEVLAMRLKV+GLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNNGVKLVLDDNVGDASRPSY
        AIVNSLKNNG+KL+L+DN  + SRPSY
Subjt:  AIVNSLKNNGVKLVLDDNVGDASRPSY

A0A6J1CGQ4 uncharacterized protein LOC1110113561.7e-5792.97Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLFISLKYITANVVDRNNGR+VATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKG KN TKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ
        AIVNSL+N GVKL+LDDNV  ASRP YQ
Subjt:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ

A0A6J1FXG0 uncharacterized protein LOC1114484605.2e-5993.75Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ
        AIVNSLKNNGVKL+LD+N  DASRPSY+
Subjt:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ

A0A6J1JBQ5 uncharacterized protein LOC1114836102.6e-5892.97Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ
        AIVNSLKNNGVKL+LD+N  DA RPSY+
Subjt:  AIVNSLKNNGVKLVLDDNVGDASRPSYQ

A0A6P3ZI60 uncharacterized protein LOC1074114744.9e-5792.13Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLFISLKYITANVVDRNNGR VAT+STVEHSIKGSLECGRSCNAKAA+VVGEVLAMRLKV+GLEQGQGRGIHVDVNKE+EKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNNGVKLVLDDNVGDASRPSY
        AIVNSLKNNGVKL+LDDN  ++SRPSY
Subjt:  AIVNSLKNNGVKLVLDDNVGDASRPSY

SwissProt top hitse value%identityAlignment
A1KRI9 50S ribosomal protein L181.6e-0429.63Show/hide
Query:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV
        LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +A + K  G+E+              ++ GF+   ++ A+ 
Subjt:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV

A9M3V0 50S ribosomal protein L181.6e-0429.63Show/hide
Query:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV
        LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +A + K  G+E+              ++ GF+   ++ A+ 
Subjt:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV

Q5F5U3 50S ribosomal protein L181.6e-0429.63Show/hide
Query:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV
        LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +A + K  G+E+              ++ GF+   ++ A+ 
Subjt:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV

Q7DDT0 50S ribosomal protein L181.6e-0429.63Show/hide
Query:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV
        LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +A + K  G+E+              ++ GF+   ++ A+ 
Subjt:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV

Q9JQQ6 50S ribosomal protein L181.6e-0429.63Show/hide
Query:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV
        LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +A + K  G+E+              ++ GF+   ++ A+ 
Subjt:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV

Arabidopsis top hitse value%identityAlignment
AT3G45020.1 Ribosomal L18p/L5e family protein2.1e-5281.82Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLF+S+KYITANVVDRNNGRIV TASTVEH+IK SLECGR+CNAKAAA+VGEVLAMRLKV+GL+ GQGRGIH DV KEIEKKGFK+RTK+W
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNNGVKLVLDDNVGD
        A++NSL+NNGV L+LDD+  D
Subjt:  AIVNSLKNNGVKLVLDDNVGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATGCGGATCGAGGGTTCGAGGTTCTGTGATCGGGAGGCTGAGGCTTCTGATTTATAGGACTGCTCCACGTTTCCACGTGTCCTTCACGAACCTCTACTTCTGGTT
GCGTAGCCGACTGAATTTGTTTTGTGAGGGCAAATTAGAGAATTCACCTCCTGTTAGTGTATACCAATCCCTACCTCTCGTATCGCGCCGACGACCCACATCCGCCGTGC
CGGCGACCTTCTTCCGCCACGCCGTCGAGACTCCTGCTCGCCCCACATCCTCCATCGATTCTCCTTCTGCGCGAGGACTGTACAATTTCTCAGAAATTCAAACTAAGGAA
GAAGTTGACGCAAGCGCCGATACGGGGGAAGACCATTCTATTGAAGATGATTACTCCTCAAGCGATAGCGGAGACGAAGGAGTTAGCAAGAAAAAGAAAACGGTAGACAA
AAAGGCCGTCTCCTCCGTTTCAGCAGCCCAGTGTCGCCGCCGCAGCCTCCTTCACAGCGTGGTTATGAGAAACCTTTATTCCATTGTTGTTAGGGATGGTGAATTGCTGC
TAGGAATGACAGTATTAAAGCGCTACGTGCTGCGATTATTCATATCTTTGAAGTACATAACAGCCAATGTGGTAGATAGAAATAATGGACGGATTGTTGCAACTGCATCC
ACAGTTGAACACTCCATCAAGGGCTCACTTGAATGTGGCCGGTCTTGTAATGCTAAGGCAGCCGCAGTTGTTGGAGAAGTGTTGGCTATGCGACTCAAAGTCGACGGTCT
TGAACAGGGGCAAGGAAGAGGGATTCATGTAGATGTAAACAAGGAAATCGAGAAGAAAGGCTTCAAAAACCGCACAAAAATCTGGGCCATAGTCAACTCACTCAAGAATA
ACGGAGTTAAACTTGTTCTCGACGACAATGTTGGAGATGCATCTCGGCCAAGTTATCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGATGCGGATCGAGGGTTCGAGGTTCTGTGATCGGGAGGCTGAGGCTTCTGATTTATAGGACTGCTCCACGTTTCCACGTGTCCTTCACGAACCTCTACTTCTGGTT
GCGTAGCCGACTGAATTTGTTTTGTGAGGGCAAATTAGAGAATTCACCTCCTGTTAGTGTATACCAATCCCTACCTCTCGTATCGCGCCGACGACCCACATCCGCCGTGC
CGGCGACCTTCTTCCGCCACGCCGTCGAGACTCCTGCTCGCCCCACATCCTCCATCGATTCTCCTTCTGCGCGAGGACTGTACAATTTCTCAGAAATTCAAACTAAGGAA
GAAGTTGACGCAAGCGCCGATACGGGGGAAGACCATTCTATTGAAGATGATTACTCCTCAAGCGATAGCGGAGACGAAGGAGTTAGCAAGAAAAAGAAAACGGTAGACAA
AAAGGCCGTCTCCTCCGTTTCAGCAGCCCAGTGTCGCCGCCGCAGCCTCCTTCACAGCGTGGTTATGAGAAACCTTTATTCCATTGTTGTTAGGGATGGTGAATTGCTGC
TAGGAATGACAGTATTAAAGCGCTACGTGCTGCGATTATTCATATCTTTGAAGTACATAACAGCCAATGTGGTAGATAGAAATAATGGACGGATTGTTGCAACTGCATCC
ACAGTTGAACACTCCATCAAGGGCTCACTTGAATGTGGCCGGTCTTGTAATGCTAAGGCAGCCGCAGTTGTTGGAGAAGTGTTGGCTATGCGACTCAAAGTCGACGGTCT
TGAACAGGGGCAAGGAAGAGGGATTCATGTAGATGTAAACAAGGAAATCGAGAAGAAAGGCTTCAAAAACCGCACAAAAATCTGGGCCATAGTCAACTCACTCAAGAATA
ACGGAGTTAAACTTGTTCTCGACGACAATGTTGGAGATGCATCTCGGCCAAGTTATCAATAA
Protein sequenceShow/hide protein sequence
MRCGSRVRGSVIGRLRLLIYRTAPRFHVSFTNLYFWLRSRLNLFCEGKLENSPPVSVYQSLPLVSRRRPTSAVPATFFRHAVETPARPTSSIDSPSARGLYNFSEIQTKE
EVDASADTGEDHSIEDDYSSSDSGDEGVSKKKKTVDKKAVSSVSAAQCRRRSLLHSVVMRNLYSIVVRDGELLLGMTVLKRYVLRLFISLKYITANVVDRNNGRIVATAS
TVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIVNSLKNNGVKLVLDDNVGDASRPSYQ