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Spg000396 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000396
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold8:36944826..36945230
RNA-Seq ExpressionSpg000396
SyntenySpg000396
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045945.1 uncharacterized protein E6C27_scaffold243G004890 [Cucumis melo var. makuwa]1.8e-6394.78Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPL KAHLPISLT+LC+LAA
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY
        KANVALASSKKA+P LKAAPTAVGYRIGA+G SY
Subjt:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY

XP_022148561.1 uncharacterized protein LOC111017195 [Momordica charantia]3.2e-6090.3Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MGVCASSQHS+ASLTNWPFTAKIIHTDG LQELRHPVKA HIL+QNP+CFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAK+HLP+SLT+LCALAA
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY
        KANVALA+SKKAYP LKAAP AVG+RIGA GASY
Subjt:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY

XP_022944054.1 uncharacterized protein LOC111448604 [Cucurbita moschata]6.6e-5889.55Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MGVCASSQHS+ SLTNWPFTAKIIH DGRLQELRHPVKASHILNQNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPLAK+ LPISLT LCALAA
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY
        KANVALASSKKAYP +KAAP AV YRI A G SY
Subjt:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY

XP_022986185.1 uncharacterized protein LOC111484003 [Cucurbita maxima]2.1e-5688.06Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MGVCASSQHS+ SLT W FTAKIIH DGRLQELRHPVKASHILNQNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPLAK+ LPISLT LCALAA
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY
        KANVAL SSKKAYP +KAAP AVGYRI A G SY
Subjt:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY

XP_023512236.1 uncharacterized protein LOC111777025 [Cucurbita pepo subsp. pepo]1.7e-5890.3Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MGVCASSQHS+ SLTNWPFTAKIIH DGRLQELRHPVKASHILNQNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPLAK+ LPISLT LCALAA
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY
        KANVALASSKKAYP +KAAP AVG+RI A GASY
Subjt:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY

TrEMBL top hitse value%identityAlignment
A0A5D3CPA0 Uncharacterized protein8.7e-6494.78Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPL KAHLPISLT+LC+LAA
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY
        KANVALASSKKA+P LKAAPTAVGYRIGA+G SY
Subjt:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY

A0A6J1D5R9 uncharacterized protein LOC1110171951.5e-6090.3Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MGVCASSQHS+ASLTNWPFTAKIIHTDG LQELRHPVKA HIL+QNP+CFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAK+HLP+SLT+LCALAA
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY
        KANVALA+SKKAYP LKAAP AVG+RIGA GASY
Subjt:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY

A0A6J1FVY0 uncharacterized protein LOC1114486043.2e-5889.55Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MGVCASSQHS+ SLTNWPFTAKIIH DGRLQELRHPVKASHILNQNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPLAK+ LPISLT LCALAA
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY
        KANVALASSKKAYP +KAAP AV YRI A G SY
Subjt:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY

A0A6J1G7N2 uncharacterized protein LOC1114516192.5e-5587.22Show/hide
Query:  MGVCASSQHSNA-SLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALA
        MGVCASSQ+S+A SLTNWP TAKIIHTDGRLQELRHPVKA HIL+QNPNCFLCSSESMKIDSI+PQISS+RELELGEIYFLIPLAKAHLPISLTELC+LA
Subjt:  MGVCASSQHSNA-SLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALA

Query:  AKANVALASSKKAYPPLKAAPTAVGYRIGASGA
        AKA+VALA+SKK Y  LKAAP +VGYRIGA GA
Subjt:  AKANVALASSKKAYPPLKAAPTAVGYRIGASGA

A0A6J1JDD5 uncharacterized protein LOC1114840031.0e-5688.06Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MGVCASSQHS+ SLT W FTAKIIH DGRLQELRHPVKASHILNQNPNCFLCSSESMKI+SIVPQISSDRELELGEIYFLIPLAK+ LPISLT LCALAA
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY
        KANVAL SSKKAYP +KAAP AVGYRI A G SY
Subjt:  KANVALASSKKAYPPLKAAPTAVGYRIGASGASY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein3.4e-1234.96Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHIL----------NQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPI
        MG+C S   +     +   TAKI+  +G L+E   PV AS +L          + + + FLC+S+S+  D  +P I SD  L+  +IYF++P++K    +
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHIL----------NQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPI

Query:  SLTELCALAAKANVAL--ASSKK
        S +++ ALA KA+VA+  A+ KK
Subjt:  SLTELCALAAKANVAL--ASSKK

AT2G23690.1 unknown protein1.3e-1941.28Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MG+C+S + +  +      TAK+I  DGR+ E   PVK  ++L +NP CF+C+S+ M  D++V  IS+D E +LG++YF +PL+  H  +   E+ ALA 
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASS
        KA+ AL  S
Subjt:  KANVALASS

AT3G50800.1 unknown protein1.5e-1541.28Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MG CAS +           TAK+I  DG LQE   PVK   IL +NP  F+C+S+ M  D  V  +    +L  GE+YF++PL   + P+   E+ ALA 
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASS
        KA+ ALA S
Subjt:  KANVALASS

AT4G37240.1 unknown protein4.9e-1943.4Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MG+C+SS+ +  +      TAK+I  DGR+ E  +PVK  ++L + P CF+C+S+ M  D  V  IS+D EL+LG+IYF +PL     P+   E+ ALA 
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVAL
        KA+ AL
Subjt:  KANVAL

AT5G66580.1 unknown protein1.9e-1539.45Show/hide
Query:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA
        MG CAS +   +       +AK+I  DG LQE   PVK   IL +NP  F+C+S+ M  D  V  ++ + EL  G++YF++PL   + P+   E+ ALA 
Subjt:  MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAA

Query:  KANVALASS
        KA+ AL  S
Subjt:  KANVALASS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGTTTGTGCCTCATCCCAGCACTCAAATGCTAGCCTCACCAACTGGCCCTTCACTGCGAAAATTATTCATACAGACGGTAGGCTTCAAGAATTGAGGCACCCTGT
AAAGGCCAGCCACATTCTTAATCAGAATCCCAATTGCTTCCTCTGCAGTTCAGAATCTATGAAGATCGATTCGATCGTTCCCCAAATTTCCAGCGACAGAGAGCTCGAAT
TGGGGGAAATTTACTTTCTAATCCCACTCGCTAAAGCCCATCTGCCTATCTCTCTAACAGAGTTGTGTGCTTTGGCCGCCAAAGCAAATGTGGCCCTCGCCAGCTCCAAG
AAGGCGTATCCGCCTTTGAAAGCGGCGCCGACCGCCGTCGGGTACAGAATCGGAGCGTCGGGGGCGTCGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGTTTGTGCCTCATCCCAGCACTCAAATGCTAGCCTCACCAACTGGCCCTTCACTGCGAAAATTATTCATACAGACGGTAGGCTTCAAGAATTGAGGCACCCTGT
AAAGGCCAGCCACATTCTTAATCAGAATCCCAATTGCTTCCTCTGCAGTTCAGAATCTATGAAGATCGATTCGATCGTTCCCCAAATTTCCAGCGACAGAGAGCTCGAAT
TGGGGGAAATTTACTTTCTAATCCCACTCGCTAAAGCCCATCTGCCTATCTCTCTAACAGAGTTGTGTGCTTTGGCCGCCAAAGCAAATGTGGCCCTCGCCAGCTCCAAG
AAGGCGTATCCGCCTTTGAAAGCGGCGCCGACCGCCGTCGGGTACAGAATCGGAGCGTCGGGGGCGTCGTACTGA
Protein sequenceShow/hide protein sequence
MGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKAHLPISLTELCALAAKANVALASSK
KAYPPLKAAPTAVGYRIGASGASY