; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000401 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000401
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor bHLH162-like
Genome locationscaffold8:42102645..42105195
RNA-Seq ExpressionSpg000401
SyntenySpg000401
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR015660 - Achaete-scute transcription factor-related


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646851.1 hypothetical protein Csa_020734 [Cucumis sativus]5.8e-4269.59Show/hide
Query:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREER
        +LP TVSDQI+ AINYIKSLETKLK+D+EKKE +LRRSK +   + SSSSS  A   + N  +PELKIK+MG AVEVVLT+GLED+ LFY+ IRIL EER
Subjt:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREER

Query:  AEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWK
        AEIINVSYS+L+NT+LYSLHAEIEDVV++FG T KL ERL +LVY  K
Subjt:  AEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWK

XP_022944108.1 transcription factor bHLH162-like [Cucurbita moschata]4.8e-4464.17Show/hide
Query:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGL-EDQFLFYEIIRILREE
        ELPL+V DQI+EAI YIKSLE KLKKD+EKKE F RR         SSSSS  A  RS+N   PEL+IK+MGSAVEVVL++GL ED+F+FYEII I  EE
Subjt:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGL-EDQFLFYEIIRILREE

Query:  RAEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHFWRH
        RAEI+NVSYSV+ N+VLYSL+AEIEDVVYEFGA TK  ER++RLVY W+ DAE    AA SSS HGG   P  + P+T SD+ F+ H
Subjt:  RAEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHFWRH

XP_023512282.1 transcription factor bHLH162-like [Cucurbita pepo subsp. pepo]1.9e-4565.57Show/hide
Query:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREER
        ELPL+VSDQI+EAI YIKSLE KLKKD+EKKE F RRS        SSSSS  A  R++N   PEL+IK+MGS VEVVL++GLED+F+FYEII I  EER
Subjt:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREER

Query:  AEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHF
        AEI+NVSYSV+ N+VLYSLHAEIEDVVYEFGA TK  ER++RLVY W+ DAE    AA SSS HGG   P  + P+T SD+ F
Subjt:  AEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHF

XP_038902350.1 transcription factor bHLH162-like [Benincasa hispida]1.0e-4164.48Show/hide
Query:  LPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREERA
        LPLTVS+QI+E I  IKSLE KLKKD+EKKE  LR+SK SL     SS S  A   +QN  +PELKIK+MGSAVEVVLT+GLED+ +FYEIIRI  EER 
Subjt:  LPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREERA

Query:  EIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHFW
        EIINVSYS LE+T++YSLHAEIEDVVYEFG  TKL ERL++LV+    D E  QA A  SS HGG++ P AD   TSS ++FW
Subjt:  EIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHFW

XP_038902351.1 transcription factor bHLH162-like [Benincasa hispida]3.0e-4666.13Show/hide
Query:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREER
        ELPLTV DQID+AI YIKSLE  LKKD+EKKE  LR+SK S     SSSSS  A   S N  +PELKIK+MGSAVEVVLT+GLED+ +FYEIIRI  EER
Subjt:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREER

Query:  AEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHFWRH
         EIIN+SYS+LENT++YSLH EIEDVVYEFG  TKL ERL++LV+    D E  QA A SSS HGG++ P AD P  SSD++FW H
Subjt:  AEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHFWRH

TrEMBL top hitse value%identityAlignment
A0A5D3BZ69 Transcription factor bHLH36-like isoform X12.6e-4068.42Show/hide
Query:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREER
        +LP TV+DQI+ AINYIKSLE KLK+D+EKKE +LRRSK + S + SSSS +  S+ SQN  +PELKIK+MGSAVEVVL +GLED+ +FYE IRIL EER
Subjt:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREER

Query:  AEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAE
        AEIINVSYS+L++T+LYSLHAEIEDVVY+FG   KL ERL +LVY  K +AE
Subjt:  AEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAE

A0A6J1FXP8 transcription factor bHLH162-like2.3e-4464.17Show/hide
Query:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGL-EDQFLFYEIIRILREE
        ELPL+V DQI+EAI YIKSLE KLKKD+EKKE F RR         SSSSS  A  RS+N   PEL+IK+MGSAVEVVL++GL ED+F+FYEII I  EE
Subjt:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGL-EDQFLFYEIIRILREE

Query:  RAEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHFWRH
        RAEI+NVSYSV+ N+VLYSL+AEIEDVVYEFGA TK  ER++RLVY W+ DAE    AA SSS HGG   P  + P+T SD+ F+ H
Subjt:  RAEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHFWRH

A0A6J1G8B1 transcription factor bHLH162-like2.4e-4165.32Show/hide
Query:  PLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREERAE
        PLTV DQI+EAI YI+SL  KL K KEKK+  L               SAP   RS +S LPELKIK+MGSAVEVV  + L D+FLFYEIIRI  EERAE
Subjt:  PLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREERAE

Query:  IINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTP
        IIN +YSVL++TVLYSLHAEIEDV+Y FGA TKL ERL+RL Y WK DAE  QAA ASSSG+GGSH P+ DTP
Subjt:  IINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTP

A0A6J1I4R7 transcription factor bHLH162-like3.1e-4161.88Show/hide
Query:  PLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREERAE
        PLTVSDQI+EAI YIKSLE KL+K KEKKE  L     SL++     SSAP+   S N+  PEL+IK+MGS VEVV   G EDQ LF E+I +  EERAE
Subjt:  PLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREERAE

Query:  IINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHF
        IIN++YS+ E+ +LYS+HAEIEDVVYE GA  KL ERL +LVY WK DAE   A  ASSSGHGG+HPP A  P  SSD HF
Subjt:  IINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHF

A0A6J1JF05 transcription factor bHLH162-like4.1e-4161.41Show/hide
Query:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGL-EDQFLFYEIIRILREE
        E+PL+VSDQI+EAI YIKSLE KLKK++EKKE F R+S  SL  +P+         RS+N   PEL+IK++GSAVEVVL+ GL ED+F+FYEII I  +E
Subjt:  ELPLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGL-EDQFLFYEIIRILREE

Query:  RAEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHF
        RAEI+NVSYSV+ N+VLYSLHAEIEDVVYEFGA TK  ER++RLVY W  D E    AA SSS  GGS  P  + P+T SD+ F
Subjt:  RAEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLVYRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHF

SwissProt top hitse value%identityAlignment
F4JIJ7 Transcription factor bHLH1625.2e-1737.76Show/hide
Query:  PLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREE-RA
        PLT+ DQ+DEA NYIK L+  ++K +E+K + +  +      S  SSS + +   S    LP+++I++ GS   + L + LE +F+F EIIR+L EE  A
Subjt:  PLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREE-RA

Query:  EIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLV
        EI +  YS++++ V ++LH ++E+  +++GA +++ ERLE++V
Subjt:  EIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLV

Arabidopsis top hitse value%identityAlignment
AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.7e-1837.76Show/hide
Query:  PLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREE-RA
        PLT+ DQ+DEA NYIK L+  ++K +E+K + +  +      S  SSS + +   S    LP+++I++ GS   + L + LE +F+F EIIR+L EE  A
Subjt:  PLTVSDQIDEAINYIKSLETKLKKDKEKKESFLRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREE-RA

Query:  EIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLV
        EI +  YS++++ V ++LH ++E+  +++GA +++ ERLE++V
Subjt:  EIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATTCAGGGCTGAACTGAGCGGAACCGAGACGACCGAGGACACCCTGGACCGAGCGGAGGTGGAAGAGCTCGGCCCGCGCAAGCGGGCCGAATGGTCGACCTTGGC
CTCAGGCCGAGGCCGACCATATGGGTCGGGCCAAGTCGGCCCGACCCTCTGGTATGTTCTCCCTCTGGGTCAGTTTCCTGGTCCTATTGTTTGCTCGGTTGTCCTCGTCA
GCCCCTTTGAGCTGCCACTGACAGTGTCGGATCAGATCGACGAAGCCATAAACTACATAAAATCACTCGAGACCAAGCTGAAGAAGGATAAGGAGAAGAAGGAGAGCTTT
TTGAGAAGATCGAAAAGGTCGTTGTCGCTGTCGCCGTCGTCGTCGTCATCGGCACCAGCGTCGATGAGGAGCCAGAACAGTACTTTACCTGAACTGAAAATCAAACAGAT
GGGTTCGGCCGTGGAGGTTGTTTTAACAAGTGGGTTGGAGGATCAGTTCTTGTTTTACGAGATCATTCGCATCCTTCGCGAGGAGCGAGCCGAGATCATCAATGTCAGTT
ATTCCGTTCTCGAGAATACCGTCTTGTATTCACTCCATGCAGAGATTGAAGATGTGGTGTACGAATTTGGAGCAACGACGAAACTAAGGGAGAGGCTAGAAAGATTGGTT
TACAGATGGAAGGTTGATGCAGAGACGACGCAGGCTGCAGCAGCTTCTTCAAGCGGTCATGGGGGAAGCCATCCGCCGGCCGCTGACACTCCGGCGACGAGTTCCGATCA
CCATTTTTGGAGGCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGATTCAGGGCTGAACTGAGCGGAACCGAGACGACCGAGGACACCCTGGACCGAGCGGAGGTGGAAGAGCTCGGCCCGCGCAAGCGGGCCGAATGGTCGACCTTGGC
CTCAGGCCGAGGCCGACCATATGGGTCGGGCCAAGTCGGCCCGACCCTCTGGTATGTTCTCCCTCTGGGTCAGTTTCCTGGTCCTATTGTTTGCTCGGTTGTCCTCGTCA
GCCCCTTTGAGCTGCCACTGACAGTGTCGGATCAGATCGACGAAGCCATAAACTACATAAAATCACTCGAGACCAAGCTGAAGAAGGATAAGGAGAAGAAGGAGAGCTTT
TTGAGAAGATCGAAAAGGTCGTTGTCGCTGTCGCCGTCGTCGTCGTCATCGGCACCAGCGTCGATGAGGAGCCAGAACAGTACTTTACCTGAACTGAAAATCAAACAGAT
GGGTTCGGCCGTGGAGGTTGTTTTAACAAGTGGGTTGGAGGATCAGTTCTTGTTTTACGAGATCATTCGCATCCTTCGCGAGGAGCGAGCCGAGATCATCAATGTCAGTT
ATTCCGTTCTCGAGAATACCGTCTTGTATTCACTCCATGCAGAGATTGAAGATGTGGTGTACGAATTTGGAGCAACGACGAAACTAAGGGAGAGGCTAGAAAGATTGGTT
TACAGATGGAAGGTTGATGCAGAGACGACGCAGGCTGCAGCAGCTTCTTCAAGCGGTCATGGGGGAAGCCATCCGCCGGCCGCTGACACTCCGGCGACGAGTTCCGATCA
CCATTTTTGGAGGCACTAG
Protein sequenceShow/hide protein sequence
MRFRAELSGTETTEDTLDRAEVEELGPRKRAEWSTLASGRGRPYGSGQVGPTLWYVLPLGQFPGPIVCSVVLVSPFELPLTVSDQIDEAINYIKSLETKLKKDKEKKESF
LRRSKRSLSLSPSSSSSAPASMRSQNSTLPELKIKQMGSAVEVVLTSGLEDQFLFYEIIRILREERAEIINVSYSVLENTVLYSLHAEIEDVVYEFGATTKLRERLERLV
YRWKVDAETTQAAAASSSGHGGSHPPAADTPATSSDHHFWRH