CuGenDBv2

Gene ID	Spg000454
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Transcription factor E2F isoform 1
Genome location	scaffold8:46395159..46397313
RNA-Seq Expression	Spg000454
Synteny	Spg000454
Gene Ontology terms	GO:0010020 - chloroplast fission (biological process) GO:0051301 - cell division (biological process) GO:0009507 - chloroplast (cellular component) GO:0032153 - cell division site (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

EOY31525.1 Uncharacterized protein TCM_038446 [Theobroma cacao]

5.1e-36

87.06

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Query:  HFFGQPYMGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHL
        H+ G   MGNKPVK  QEQREEI LKIVPPLDQAYVRWLARD+ERIHGFTPRNPRAVKPPDHYIE+MRLNGWLDV LDDPDLAHL
Subjt:  HFFGQPYMGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHL

KAA0061729.1 uncharacterized protein E6C27_scaffold212G001040 [Cucumis melo var. makuwa]

5.7e-35

91.25

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Query:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK
        MGN+PVKQPQ   EE+FLKIVPPLDQ YVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLA LLK
Subjt:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK

XP_021278844.1 uncharacterized protein LOC110412594 [Herrania umbratica]

3.3e-35

91.25

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Query:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK
        MGNKPVK  QEQREEI LKIVPPLDQAYVRWLARD+ERIHGFTPRNPRAVKPPDHYIE+MRLNGWLDV LDDPDLAHL K
Subjt:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK

XP_022152955.1 uncharacterized protein LOC111020571 [Momordica charantia]

1.2e-37

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Query:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK
        MGNKPVKQ + QREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHL K
Subjt:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK

XP_038901668.1 uncharacterized protein LOC120088440 [Benincasa hispida]

2.7e-37

93.75

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Query:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK
        MGN+ VKQPQEQR EIFLKIVPPLDQAY+RWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHL K
Subjt:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK

TrEMBL top hits

e value

%identity

Alignment

A0A061GNT1 Uncharacterized protein

2.5e-36

87.06

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Query:  HFFGQPYMGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHL
        H+ G   MGNKPVK  QEQREEI LKIVPPLDQAYVRWLARD+ERIHGFTPRNPRAVKPPDHYIE+MRLNGWLDV LDDPDLAHL
Subjt:  HFFGQPYMGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHL

A0A061GZN3 Uncharacterized protein isoform 1

1.6e-35

91.25

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Query:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK
        MGNKPVK  QEQREEI LKIVPPLDQAYVRWLARD+ERIHGFTPRNPRAVKPPDHYIE+MRLNGWLDV LDDPDLAHL K
Subjt:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK

A0A5A7V7T4 Uncharacterized protein

2.7e-35

91.25

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Query:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK
        MGN+PVKQPQ   EE+FLKIVPPLDQ YVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLA LLK
Subjt:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK

A0A6J0ZWT3 uncharacterized protein LOC110412594

1.6e-35

91.25

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Query:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK
        MGNKPVK  QEQREEI LKIVPPLDQAYVRWLARD+ERIHGFTPRNPRAVKPPDHYIE+MRLNGWLDV LDDPDLAHL K
Subjt:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK

A0A6J1DJ99 uncharacterized protein LOC111020571

5.9e-38

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Query:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK
        MGNKPVKQ + QREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHL K
Subjt:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G22210.1 unknown protein

1.2e-27

70.37

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Query:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPR-NPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK
        MGNK     +E+REEI LKIVPPLD+ ++RWLARDL+R+HGF P+ N RA+ PPD YIEFMRLNG LDV LDDPDLAHL K
Subjt:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPR-NPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK

AT5G22210.2 unknown protein

1.2e-27

70.37

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Query:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPR-NPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK
        MGNK     +E+REEI LKIVPPLD+ ++RWLARDL+R+HGF P+ N RA+ PPD YIEFMRLNG LDV LDDPDLAHL K
Subjt:  MGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPR-NPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK

Sequences

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CDS sequence

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ATGAAAGGACATAAGGGCGGAGTTGTCTTTTCCCTTTCTCCGTTTGTCTTCATATTCGAACAGAGAAAAACGCACCGTAAAAAAATTGCCACCGTGCAACGTCCATTCAC
GCCACTTCTCGTAGCGCCAATCGAGCTACAGGTTACGGCTAAGAGAGAATCCAGCGCTCTCAAGGAGAATTTCACTCCATTCAACTGTTTTCTCATGTTTCGTTTCTTCT
ACTTGGAAATCGAGTCTGATGAGAATGTATGGCATTGGGCTAGGGTTTTAGGAAGTTCGATTGGTTGCAACATTGGGAAATCTGATTATTGTTGGTTGGATTTGAGAGAC
ATTGTCATTTTGTTCGTTCTGCTTTGCGTCTGTCTGTGGTCAGGTGTATGCCACTTCTTTGGGCAGCCTTACATGGGAAACAAACCCGTGAAGCAACCACAGGAACAAAG
GGAAGAAATCTTCTTGAAGATAGTGCCTCCTCTGGACCAAGCTTATGTTAGGTGGCTCGCTCGGGATCTTGAGAGGATTCATGGCTTCACTCCAAGAAATCCTCGTGCCG
TGAAGCCTCCCGATCACTACATAGAGTTCATGCGCTTGAATGGATGGTTGGATGTGAGTTTAGACGATCCAGATCTGGCACATTTACTGAAGTAG

mRNA sequence

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Protein sequence

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MKGHKGGVVFSLSPFVFIFEQRKTHRKKIATVQRPFTPLLVAPIELQVTAKRESSALKENFTPFNCFLMFRFFYLEIESDENVWHWARVLGSSIGCNIGKSDYCWLDLRD
IVILFVLLCVCLWSGVCHFFGQPYMGNKPVKQPQEQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLLK

Spg000454 (gene) of Sponge gourd (cylindrica) v1 genome