CuGenDBv2

Gene ID	Spg000459
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	scaffold8:47944236..47948996
RNA-Seq Expression	Spg000459
Synteny	Spg000459
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006301 - postreplication repair (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7035803.1 Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]

4.2e-153

85.49

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Query:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR
        YKAI          VEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVRSFLDLRSWFR
Subjt:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR

Query:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS
        TN++PSCEVCNEAGVKAELC NEGCTVRVH YCLKKMLSNKKSKRACP CGTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS
Subjt:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS

Query:  --TAQTSQPPPDTRRVTRSSARQR
           AQ SQPPPDTRR+TRSSA  R
Subjt:  --TAQTSQPPPDTRRVTRSSARQR

XP_022957637.1 non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata]

5.5e-153

85.19

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Query:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSP+ND+QLFN+YLL +NKALSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR
        YKAI          VEAIAQDPSA+GGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVRSFLDLRSWFR
Subjt:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR

Query:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS
        TN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP CGTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS
Subjt:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS

Query:  --TAQTSQPPPDTRRVTRSSARQR
           AQ SQPPPDTRR+TRSSA  R
Subjt:  --TAQTSQPPPDTRRVTRSSARQR

XP_022995422.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima]

1.3e-154

86.11

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Query:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR
        YKAI          VEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVRSFLDLRSWFR
Subjt:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR

Query:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS
        TN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP CGTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS
Subjt:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS

Query:  --TAQTSQPPPDTRRVTRSSARQR
           AQ SQPPPDTRR+TRSSA QR
Subjt:  --TAQTSQPPPDTRRVTRSSARQR

XP_022995424.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima]

1.3e-154

86.11

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Query:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR
        YKAI          VEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVRSFLDLRSWFR
Subjt:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR

Query:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS
        TN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP CGTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS
Subjt:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS

Query:  --TAQTSQPPPDTRRVTRSSARQR
           AQ SQPPPDTRR+TRSSA QR
Subjt:  --TAQTSQPPPDTRRVTRSSARQR

XP_023533198.1 non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subsp. pepo]

2.9e-154

85.8

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Query:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR
        YKAI          VEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVRSFLDLRSWFR
Subjt:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR

Query:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS
        TN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP CGTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS
Subjt:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS

Query:  --TAQTSQPPPDTRRVTRSSARQR
           AQ SQPPPDTRR+TRS+A QR
Subjt:  --TAQTSQPPPDTRRVTRSSARQR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

8.5e-152

86.07

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Query:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALL RGPLRED+F L+FTRIT KSPDNDQQLFN+YLLAINKALSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQ-SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWF
        YKAI          VEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVRSFLDLRSWF
Subjt:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQ-SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWF

Query:  RTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGD
        RTN++PSCEVCNEAGVKAELCDNEGCTVRVH+YCLKKMLSNKKSKRACPGCGT+WR+T  NMES+EEE+EPD RTQ  SSS +RKKSRLNI++DS  NG 
Subjt:  RTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGD

Query:  STAQTSQPPPDTRRVTRSSARQR
          A  SQPPP+TRRVTRSSARQR
Subjt:  STAQTSQPPPDTRRVTRSSARQR

A0A6J1DJY3 Non-structural maintenance of chromosomes element 1 homolog

8.5e-152

86.07

Show/hide

Query:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALL RGPLRED+F L+FTRIT KSPDNDQQLFN+YLLAINKALSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQ-SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWF
        YKAI          VEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVRSFLDLRSWF
Subjt:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQ-SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWF

Query:  RTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGD
        RTN++PSCEVCNEAGVKAELCDNEGCTVRVH+YCLKKMLSNKKSKRACPGCGT+WR+T  NMES+EEE+EPD RTQ  SSS +RKKSRLNI++DS  NG 
Subjt:  RTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGD

Query:  STAQTSQPPPDTRRVTRSSARQR
          A  SQPPP+TRRVTRSSARQR
Subjt:  STAQTSQPPPDTRRVTRSSARQR

A0A6J1GZN9 Non-structural maintenance of chromosomes element 1 homolog

2.6e-153

85.19

Show/hide

Query:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSP+ND+QLFN+YLL +NKALSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR
        YKAI          VEAIAQDPSA+GGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVRSFLDLRSWFR
Subjt:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR

Query:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS
        TN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP CGTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS
Subjt:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS

Query:  --TAQTSQPPPDTRRVTRSSARQR
           AQ SQPPPDTRR+TRSSA  R
Subjt:  --TAQTSQPPPDTRRVTRSSARQR

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

6.3e-155

86.11

Show/hide

Query:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR
        YKAI          VEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVRSFLDLRSWFR
Subjt:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR

Query:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS
        TN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP CGTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS
Subjt:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS

Query:  --TAQTSQPPPDTRRVTRSSARQR
           AQ SQPPPDTRR+TRSSA QR
Subjt:  --TAQTSQPPPDTRRVTRSSARQR

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

6.3e-155

86.11

Show/hide

Query:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQFELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR
        YKAI          VEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVRSFLDLRSWFR
Subjt:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFR

Query:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS
        TN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP CGTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS
Subjt:  TNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS

Query:  --TAQTSQPPPDTRRVTRSSARQR
           AQ SQPPPDTRR+TRSSA QR
Subjt:  --TAQTSQPPPDTRRVTRSSARQR

SwissProt top hits

e value

%identity

Alignment

Q07913 Non-structural maintenance of chromosomes element 1

2.0e-04

22.16

Show/hide

Query:  YYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVRTNMIKGGKVEAIAQDPS---------------AQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNF
        ++  VN  S E++KL T+++  +I F K  +   MI G   E I + P+               A  G SN+A         +G T          F+  
Subjt:  YYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVRTNMIKGGKVEAIAQDPS---------------AQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNF

Query:  SISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFRT-NEVPSCEVCNEAGVKAELCDNEGC
        + +  E  +  L + +W   T +G   + +R   +L  +  +   + +C+ C++  ++   C NE C
Subjt:  SISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFRT-NEVPSCEVCNEAGVKAELCDNEGC

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

2.0e-89

52.89

Show/hide

Query:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF
        M  LSW+HHTLIQAL++RGPL+E  F  +FT +T ++P   +++F+ YLL INK LS+  FEL+ CR+QYDG+V YG+VN V+D+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAF

Query:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQS-QVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWF
        +K I          +EAIAQD +AQG IS+  AL+++LENQ+    S S Q +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+RS LDLRSWF
Subjt:  YKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQS-QVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWF

Query:  RTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQW-----RATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDS
        R N+VPSCEVCNEAGVKA+LC  EGC VR+H+YCLKK+LS +  KR C GCG  W       T    E+  +EEE +T+   P +  +R++       DS
Subjt:  RTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQW-----RATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDS

Query:  GPNGDSTAQ-TSQPPPDTRRVTRSSARQR
          NG S A   S    +TRRVTRS    R
Subjt:  GPNGDSTAQ-TSQPPPDTRRVTRSSARQR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

GGAAAAATTTTCACGATCCTGCAACCAGCGAACGCGACTTCCAGGCGAAGCAGCGAACACAACGGCGGCGACGGCGAGTACACGGCGGTGGTGACGGCGAGTTCACAACG
GCAGCGAACACGACGGCGAGTAGTTCACGATTTTAAGAACCGAACACGATTTCCAATCTTAGTGAGCTTTGAGATAGTGGGTCAAGGGTTCAGAATGCCGGAGCTGAGCT
GGAGACATCACACTCTCATTCAAGCGCTACTCACTCGTGGCCCACTCAGAGAGGATCGGTTCCGTTTGGTGTTTACCCGCATCACCGAAAAGAGTCCAGATAATGACCAG
CAGCTTTTTAATAGTTACCTCCTGGCAATAAATAAAGCACTTTCATTTGCTCAGTTTGAGCTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTATTATGGCTTGGT
CAATACTGTATCTGACGAACAGTCCAAACTGGGAACGAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTGAGGACAAATATGATAAAAGGAGGAAAAGTTG
AAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATACAGGGTCCCAGTCTCAAGTCATA
CCACCTGCCTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTGTGTAAATTTGGGAGT
CAGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGAAGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTGATAATGAAGGTTGCA
CTGTCCGTGTACATCGATATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAGGTTGTGGCACTCAATGGCGAGCTACAGCGCCGAATATGGAG
TCCAGGGAGGAAGAGGAGGAGCCAGATACGCGCACTCAAGACCCGTCATCATCACATAAGAGGAAGAAATCCAGATTGAACATAAATATTGATTCAGGACCGAATGGAGA
TAGTACGGCACAAACTTCCCAACCTCCTCCAGATACAAGGAGAGTAACACGAAGTTCTGCACGCCAGCGGTAG

mRNA sequence

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Protein sequence

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GKIFTILQPANATSRRSSEHNGGDGEYTAVVTASSQRQRTRRRVVHDFKNRTRFPILVSFEIVGQGFRMPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQ
QLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVRTNMIKGGKVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVI
PPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNME
SREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDSTAQTSQPPPDTRRVTRSSARQR

Spg000459 (gene) of Sponge gourd (cylindrica) v1 genome